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Docker rate limits causing flaky CI

flakeFor tests that are flakyFor tests that are flaky

github_actionsPull requests that update GitHub Actions codePull requests that update GitHub Actions code

Status: Open.

#5771 In loculus-project/loculus;

· corneliusroemer opened on Dec 19, 2025

prepro: refactor config to improve typing

preprocessingIssues related to the preprocessing componentIssues related to the preprocessing component

Status: Open.

#5770 In loculus-project/loculus;

· anna-parker opened on Dec 19, 2025

Website: can nolonger select version in search entries selector

bugSomething isn't workingSomething isn't working

websiteTasks related to the web applicationTasks related to the web application

Status: Open.

#5761 In loculus-project/loculus;

· anna-parker opened on Dec 18, 2025

silo-import python is slow

performance

Status: Open.

#5758 In loculus-project/loculus;

· corneliusroemer opened on Dec 18, 2025

ENA-deposition: improve config structure by splitting up into logical groupings

Status: Open.

#5757 In loculus-project/loculus;

· anna-parker opened on Dec 18, 2025

Remove Spring Boot 4 compatibility shim for Expose auto configure once supported by Exposed

backendrelated to the loculus backend componentrelated to the loculus backend component

dependenciesPull requests that update a dependency filePull requests that update a dependency file

Status: Open.

#5754 In loculus-project/loculus;

· corneliusroemer opened on Dec 17, 2025

Migrate to Jackson 3 as Jackson 2 is deprecated by Spring Boot

backendrelated to the loculus backend componentrelated to the loculus backend component

dependenciesPull requests that update a dependency filePull requests that update a dependency file

Status: Open.

#5753 In loculus-project/loculus;

· corneliusroemer opened on Dec 17, 2025

Upgrade Spring Boot to 4.0

backendrelated to the loculus backend componentrelated to the loculus backend component

dependenciesPull requests that update a dependency filePull requests that update a dependency file

javaPull requests that update Java codePull requests that update Java code

Status: Open.

#5735 In loculus-project/loculus;

· corneliusroemer opened on Dec 17, 2025

Separate <code>approve</code> out of the ingest pipeline

Status: Open.

#5724 In loculus-project/loculus;

· fhennig opened on Dec 16, 2025

Group banner settings under a common <code>banners</code> key

configConfiguration related issues, i.e. helm processingConfiguration related issues, i.e. helm processing

Status: Open.

#5708 In loculus-project/loculus;

· theosanderson opened on Dec 15, 2025

Optimize sorting when loading data into SILO

performance

Status: Open.

#5707 In loculus-project/loculus;

· chaoran-chen opened on Dec 15, 2025

Scope backend Helm values under a backend block

configConfiguration related issues, i.e. helm processingConfiguration related issues, i.e. helm processing

Status: Open.

#5702 In loculus-project/loculus;

· corneliusroemer opened on Dec 15, 2025