kaks

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Here are 4 public repositories matching this topic...

kullrich / CRBHits

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CRBHits - a reimplementation of the Conditional Reciprocal Best Hit algorithm in R.

bioinformatics r r-package synteny dnds-estimation joss last pairwise-comparison dnds reciprocal-blast-hits kaks

Updated May 21, 2025
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kullrich / MSA2dist

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MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis

bioinformatics r dnds-estimation score-matrix dnds multiple-sequence-alignment bioconductor-package iupac msa2dist kaks

Updated Nov 3, 2025
C++

mazkdevf / Hoitokutsu-UIUX

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The Decoded "d7e30 30:1" Triggered Text, KAJAANI KAKS, GMD System UI/UX

ui ux nextjs tailwindcss kaks kamk kajaani kainuu kajaanikaks

Updated Jan 14, 2025
TypeScript

vsmicrogenomics / codon-alignment-suite

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It is a powerful tool for aligning nucleotide sequences based on protein alignments, translating nucleotide sequences to protein, and generating phylogenetic trees using Biopython.

tree dnds-estimation codon-alignment paml selective-pressures kaks kaks-calculation

Updated Aug 4, 2024
Python

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kaks

Here are 4 public repositories matching this topic...

kullrich / CRBHits

kullrich / MSA2dist

mazkdevf / Hoitokutsu-UIUX

vsmicrogenomics / codon-alignment-suite

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