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openproblems-bio / task_predict_modality Public

generated from openproblems-bio/task_template

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Add method: CellMapper#10

Merged

rcannood merged 11 commits intoopenproblems-bio:mainopenproblems-bio/task_predict_modality:mainfrom

quadbio:feature/no-ref/cellmapperquadbio/task_predict_modality:feature/no-ref/cellmapperCopy head branch name to clipboard

Aug 7, 2025

Conversation Commits11 (11)Checks Files changed

Merged

Add method: CellMapper#10
rcannood merged 11 commits intoopenproblems-bio:mainfrom
quadbio:feature/no-ref/cellmapper

Commits

Commits on Jul 30, 2025

Add linear version of CellMapper
Marius1311
committed
Update object naming
Marius1311
committed
Add CellMapper scVI variant
Marius1311
committed
Use modality-dependent scvi models
Marius1311
committed
Improve logging and docs
Marius1311
committed
Add cellmapper to workflow config files
Marius1311
committed
Update the Changelog
Marius1311
committed

Commits on Jul 31, 2025

Add clr normalization for adt counts
Marius1311
committed
Add CLR normalization for ADT data
Marius1311
committed

Commits on Aug 6, 2025

Correctly set the path to the utils file
Marius1311
committed
Remove accidentally committed __pycache__ file and improve .gitignore
Marius1311
committed

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