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Add OAK matching to uPheno 2 #43

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Add OAK matching to uPheno 2 #43

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3 changes: 3 additions & 0 deletions src/ontology/upheno.Makefile
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Expand Up @@ -56,6 +56,9 @@ upheno_mapping_lexical_all: ../curation/upheno-release/all/upheno_species_lexica
python3 ../scripts/lexical_mapping.py all
#echo "SKIP upheno_mapping_lexical_"

upheno_mapping_lexical_oak_all: ../curation/upheno-release/all/upheno_all_with_relations.owl
echo "Running OAK on uPheno2"

#.SECONDEXPANSION:
../curation/upheno-release/all/upheno_mapping_logical.csv: ../curation/upheno-release/all/upheno_all_with_relations.owl
$(ROBOT) query -f csv -i $< --query ../sparql/cross-species-mappings.sparql $@
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