WIP: advisory for snpeff #3580
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WIP: advisory for snpeff #3580
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mashehu
approved these changes
Oct 20, 2025
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| - mashehu |
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| nextflowVersions: | ||
| - ">=25.04.0 <25.04.3" |
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i don't think this is dependent on Nextflow
| - ">=25.04.0 <25.04.3" | ||
| references: | ||
| - title: snpeff issue regarding change of hosting location of cache and binaries | ||
| description: Issues reporting the issue with snpeff download after the change of hosting location |
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| description: Issues reporting the issue with snpeff download after the change of hosting location | |
| description: GitHub issue about the problem with snpeff download after the change of hosting location |
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| # Issue | ||
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| https://github.com/pcingola/SnpEff/issues/602 |
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not needed. will be added at the end
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| https://github.com/pcingola/SnpEff/issues/602 |
| snpeff download is broken with older versions of sarek/rnavar due to changes in location for the storage of snpeff cache. | ||
| snpeff download works with newer versions of sarek/rnavar with an updated of snpeff, but cache 105 is now not valid anymore (hopefully until a fix comes). | ||
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| -> https://github.com/pcingola/SnpEff/issues/609 |
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| -> https://github.com/pcingola/SnpEff/issues/609 |
❌ Deploy Preview for nf-core-main-site failed. Why did it fail? →
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| - name: sarek | ||
| versions: | ||
| - 2.12.0 | ||
| - name: rnavar | ||
| versions: | ||
| - 4.2.0 |
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are these versions correct?
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@netlify /advisories/snpeff_change_location