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Merge baysor preview html in multiqc report #108

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Merged
khersameesh24 merged 12 commits into from
Oct 29, 2025
Merged

Merge baysor preview html in multiqc report #108

khersameesh24 merged 12 commits into from
Oct 29, 2025

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@khersameesh24 khersameesh24 commented Oct 25, 2025

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs- [ ] If necessary, also make a PR on the nf-core/spatialxe branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

@khersameesh24 khersameesh24 requested a review from heylf October 25, 2025 21:26
This was linked to issues Oct 25, 2025
Remove idel channels from modules/subworkflows #74
Closed
Utility function to select about 30% rows from transcripts.csv #75
Closed
Make a multiqc parser for xeniumranger outs #89
Closed
Fix multiqc report when pipeline runs in preview mode #107
Closed
heylf
heylf approved these changes Oct 29, 2025
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LGTM

@khersameesh24 khersameesh24 merged commit 15a0b24 into nf-core:dev Oct 29, 2025
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heylf
heylf reviewed Oct 30, 2025
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looks good

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@heylf heylf heylf approved these changes

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