Modification of CIAlign to better display fasta-format alignments with publication-quality graphics
usage: show.alignment.py [-h] --f F --o O [--s S] --t T [--x X] [--y Y]
Make an image of an alignment
required arguments:
--f F, --file F input alignment file
--o O, --output_file O
output image
--t T, --title T image title
--x X, --xlabel X x-axis label
--y Y, --ylabel Y y-axis label
optional arguments:
--s S, --segments S JSON of a hash of notes and MSA coordinate positions of vertical lines