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@Arlene-1998
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It's necessary to sort similarities and cell indexes before assigning cell type, since w for scmapCell2Cluster and w for scmapCell may be different.
(Now default w for scmapCell2Cluster is 3, while default w for scmapCell is 10.)

@wikiselev
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Thanks for your request! I will have a look at it asap, but haven't touched scmap in a while, so will need to remember and test. Will update you once ready. Thanks again!

@wikiselev wikiselev self-assigned this Dec 12, 2019
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2 participants