Data and analysis of results presented in: Danner SM, Shepard CT, Hainline C, Shevtosva NA, Rybak IA, Magnuson DSK. Spinal control of locomotion before and after spinal cord injury. Experimental Neurology, 368, 114496. doi: 10.1016/j.expneurol.2023.114496. Preprint: bioRxiv, 2023.03.22.533794; doi: 10.1101/2023.03.22.533794
Run in Analysis.ipynb in binder
Run in Analysis.ipynb in Google Colab
data/*/*.xlsx: Raw footprint data
data/df_raw.h5: Raw data as table with meta data
data/df_phases.h5: Table of processed data, includes phase differences and other locomotion parameters as well as gait classifcation
read_data.py: Reads raw data files and creates data/df_raw.h5
calc_phases.py: Reads data/df_raw.h5 and calculates phase differences etc. and creates data/df_phases.h5
classify_gaits.py: Calculates gait classifiction based on phase differences and duty factors
Analysis.ipynb: Notebook containing all data analysis. Creates plots and calculates statistics included in the paper. Can be run on Colab or binder.
Data licensed under Creative Commons Attribution-ShareAlike 4.0 International License
Source code licensed under GNU GPL v3
