Create a debug Docker image for Apollo

.github/workflows/weekly_build.yml

@@ -34,6 +34,34 @@ jobs:
           tags: ${{ steps.meta.outputs.tags }}
           labels: ${{ steps.meta.outputs.labels }}
 
+  push-apollo-debug-deps-image-to-docker-hub:
+    name: DockerPublishApolloDebugDeps
+    runs-on: ubuntu-latest
+    steps:
+      - name: Check out the repo
+        uses: actions/checkout@v3
+
+      - name: Log in to Docker Hub
+        uses: docker/login-action@f054a8b539a109f9f41c372932f1ae047eff08c9
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_PASSWORD }}
+
+      - name: Extract metadata (tags, labels) for Docker
+        id: meta
+        uses: docker/metadata-action@98669ae865ea3cffbcbaa878cf57c20bbf1c6c38
+        with:
+          images: alexanderianblair/apollo-debug-deps
+
+      - name: Build and push Docker image
+        uses: docker/build-push-action@ad44023a93711e3deb337508980b4b5e9bcdc5dc
+        with:
+          context: docker/apollo-debug-deps/
+          file: docker/apollo-debug-deps/Dockerfile
+          push: true
+          tags: ${{ steps.meta.outputs.tags }}
+          labels: ${{ steps.meta.outputs.labels }}
+
   push-apollo-image-to-docker-hub:
     name: DockerPublishApollo
     runs-on: ubuntu-latest
@@ -61,3 +89,31 @@ jobs:
           push: true
           tags: ${{ steps.meta.outputs.tags }}
           labels: ${{ steps.meta.outputs.labels }}
+
+  push-apollo-debug-image-to-docker-hub:
+    name: DockerPublishApolloDebug
+    runs-on: ubuntu-latest
+    steps:
+      - name: Check out the repo
+        uses: actions/checkout@v3
+
+      - name: Log in to Docker Hub
+        uses: docker/login-action@f054a8b539a109f9f41c372932f1ae047eff08c9
+        with:
+          username: ${{ secrets.DOCKER_USERNAME }}
+          password: ${{ secrets.DOCKER_PASSWORD }}
+
+      - name: Extract metadata (tags, labels) for Docker
+        id: meta
+        uses: docker/metadata-action@98669ae865ea3cffbcbaa878cf57c20bbf1c6c38
+        with:
+          images: alexanderianblair/apollo-debug
+
+      - name: Build and push Docker image
+        uses: docker/build-push-action@ad44023a93711e3deb337508980b4b5e9bcdc5dc
+        with:
+          context: docker/apollo-debug/
+          file: docker/apollo-debug/Dockerfile
+          push: true
+          tags: ${{ steps.meta.outputs.tags }}
+          labels: ${{ steps.meta.outputs.labels }}

docker/apollo-debug-deps/Dockerfile

@@ -0,0 +1,47 @@
+# Build Apollo dependencies
+# Get base image
+FROM alexanderianblair/hephaestus-debug-deps:master
+
+# By default one core is used to compile
+ARG compile_cores=4
+
+# By default checkout mfem-moose branch
+ARG WORKDIR="opt"
+
+#Configure MOOSE
+RUN export MOOSE_JOBS="$compile_cores" && \
+    cd /$WORKDIR && \
+    git clone https://github.com/idaholab/moose && \
+    cd moose && \
+    git checkout master && \
+    export PETSC_DIR=/$WORKDIR/petsc && \
+    export PETSC_ARCH=arch-linux-c-opt && \
+    export CC=mpicc && \
+    export CXX=mpicxx && \
+    export F90=mpif90 && \
+    export F77=mpif77 && \
+    export FC=mpif90  && \
+    METHOD=dbg ./scripts/update_and_rebuild_libmesh.sh --with-mpi && \
+    ./configure --with-derivative-size=200 --with-ad-indexing-type=global
+
+# Build WASP
+RUN cd /$WORKDIR/moose/scripts && \
+    METHOD=dbg ./update_and_rebuild_wasp.sh
+
+# Build MOOSE
+RUN cd /$WORKDIR/moose/framework && \
+    METHOD=dbg make -j"$compile_cores"
+
+RUN cd /$WORKDIR/moose/test && \
+    METHOD=dbg make -j"$compile_cores"
+
+# This is needed or it mpiexec complains because docker runs as root
+# Discussion on this issue https://github.com/open-mpi/ompi/issues/4451
+ENV OMPI_ALLOW_RUN_AS_ROOT=1
+ENV OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=1
+
+# RUN cd /$WORKDIR/moose/test && \
+#     ./run_tests -j"$compile_cores" --re='(?!initial_condition.newton_with_exact_initialization)'
+
+# ENV OMPI_ALLOW_RUN_AS_ROOT=
+# ENV OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=

docker/apollo-debug/Dockerfile

@@ -0,0 +1,36 @@
+# Build and test Apollo image
+# Get base image
+FROM alexanderianblair/apollo-debug-deps:master
+
+# By default one core is used to compile
+ARG compile_cores=4
+
+# By default checkout mfem-moose branch
+ARG WORKDIR="opt"
+ARG build_git_sha="master"
+
+# Get Apollo with Hephaestus
+RUN cd /$WORKDIR && \
+    git clone https://github.com/aurora-multiphysics/apollo.git && \
+    cd apollo && \
+    git checkout "$build_git_sha" && \
+    git submodule update --init --recursive
+
+# Build Hephaestus
+RUN cd /$WORKDIR/apollo/contrib/hephaestus/ && \
+    mkdir build && \
+    cd build && \
+    cmake -G "Unix Makefiles" -DCMAKE_BUILD_TYPE=Debug -DMFEM_DIR=/$WORKDIR/mfem/build -DMFEM_COMMON_INCLUDES=/$WORKDIR/mfem/miniapps/common  .. && \
+    make -j1
+
+# Test Hephaestus
+RUN cd /$WORKDIR/apollo/contrib/hephaestus/build && \
+    make test
+
+# Build Apollo
+RUN cd /$WORKDIR/apollo && \
+    METHOD=dbg make -j"$compile_cores"
+
+# Test Apollo
+RUN cd /$WORKDIR/apollo && \
+    METHOD=dbg make test