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39 changes: 24 additions & 15 deletions .circleci/config.yml
Original file line number Diff line number Diff line change
Expand Up @@ -28,35 +28,44 @@ jobs:
type: string
executor: << parameters.os >>
environment:
R_LIBS: ~/Rlibs
ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS: 2
steps:
- checkout
- run:
name: Set environment
command: |
echo "export R_LIBS=$HOME/Rlibs" >> $BASH_ENV
- run:
name: Install R << parameters.r-version >>
command: |
R_VERSION="<< parameters.r-version >>"
# Install rig, R Installation Manager (https://github.com/r-lib/rig) to control installed R version
if [ "$RUNNER_OS" == "macos" ]; then
curl -L https://github.com/r-lib/rig/releases/download/latest/rig-macos-latest.pkg -o rig.pkg
sudo installer -pkg rig.pkg -target /
rm rig.pkg
rig add << parameters.r-version >>
rig default << parameters.r-version >>
brew tap r-lib/rig
brew install --cask rig
rig add $R_VERSION
# on macOS the R package is installed into a MAJOR.MINOR directory
# the PATCH is ignored (only one patch version supported) the
# architecture is added as a suffix (arm64, x86_64) to allow for
# installations to coexist
rig default "${R_VERSION%.*}-arm64"
elif [ "$RUNNER_OS" == "linux" ]; then
curl -L https://github.com/r-lib/rig/releases/download/latest/rig-linux-latest.tar.gz -o rig.tar.gz
tar xzf rig.tar.gz
sudo mv rig /usr/local/bin/
rm rig.tar.gz
sudo rig add << parameters.r-version >>
sudo rig default << parameters.r-version >>
`which sudo` curl -L https://rig.r-pkg.org/deb/rig.gpg -o /etc/apt/trusted.gpg.d/rig.gpg
`which sudo` sh -c 'echo "deb http://rig.r-pkg.org/deb rig main" > /etc/apt/sources.list.d/rig.list'
`which sudo` apt update
`which sudo` apt install r-rig
sudo rig add $R_VERSION
sudo rig default $R_VERSION
fi
- run:
name: System Dependencies
command: |
if [ "$RUNNER_OS" == "linux" ]; then
sudo apt-get -y update
sudo apt-get install -y libcurl4-openssl-dev libssh2-1-dev libharfbuzz-dev libfribidi-dev gh
sudo apt-get install -y cmake libcurl4-openssl-dev libssh2-1-dev libharfbuzz-dev libfribidi-dev gh
sudo rm -rf /var/lib/apt/lists/*
elif [ "$RUNNER_OS" == "macos" ]; then
brew install cmake
fi
- run:
name: Configuration Information
Expand All @@ -75,7 +84,7 @@ jobs:
no_output_timeout: 30m
command: |
set -x
R -e "remotes::install_git(c('.'), lib=c('${R_LIBS}'), configure.vars=c('MAKEJ=2'))"
R -e "remotes::install_git(c('.'), lib=c('${R_LIBS}'), configure.vars=c('MAKEJ=3'))"

workflows:
r-build-test:
Expand All @@ -84,7 +93,7 @@ workflows:
- r-build:
matrix:
parameters:
r-version: ['4.4.1']
r-version: ['4.3.1', '4.4.1']
os: ["macos-arm"]
filters:
branches:
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/main.yml
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@ jobs:
fail-fast: false
matrix:
R: [ '4.3.1', '4.4.1' ]
os: [ 'macos-15-intel', 'macos-latest', 'ubuntu-latest' ]
os: [ 'macos-15-intel', 'ubuntu-latest' ]
runs-on: ${{ matrix.os }}
name: ${{ matrix.R }} ${{ matrix.os }} build
env:
Expand Down
2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
# SimpleITKRInstaller

![Build Status](https://github.com/SimpleITK/SimpleITKRInstaller/actions/workflows/main.yml/badge.svg)

[![CircleCI](https://dl.circleci.com/status-badge/img/gh/SimpleITK/SimpleITKRInstaller/tree/main.svg?style=svg)](https://dl.circleci.com/status-badge/redirect/gh/SimpleITK/SimpleITKRInstaller/tree/main)

A [remotes](https://github.com/r-lib/remotes) based installer for SimpleITK in [R](https://www.r-project.org/).

Expand Down