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148 changes: 31 additions & 117 deletions .github/workflows/build-and-release.yml
Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,7 @@ on:

env:
conda_version: 4.12.0
conda_build_version: 3.21.8
conda_build_version: 3.24.0
jobs:
set-anaconda-tag:
runs-on: ubuntu-latest
Expand All @@ -29,8 +29,9 @@ jobs:
build-windows:
strategy:
matrix:
python_version: ['3.7', '3.8', '3.9', '3.10']
runs-on: windows-2019
python_version: ['3.8', '3.9', '3.10', '3.11']

runs-on: windows-2022

steps:
- uses: actions/checkout@v3
Expand All @@ -39,138 +40,51 @@ jobs:
with:
auto-update-conda: true
python-version: ${{ matrix.python_version }}
conda-build-version: ${{ env.conda_build_version }}

- name: Inspect Conda Environment
run: |
which python
conda list
conda info --all
- name: Add scripts path
run: echo "$env:CONDA\Scripts" | Out-File -FilePath $env:GITHUB_PATH -Encoding utf8 -Append
- name: Updating conda-build...
shell: cmd
run: |
# on Windows conda is a bat file that will exit it not "CALL"'d
# https://docs.conda.io/projects/conda/en/latest/user-guide/troubleshooting.html#using-conda-in-windows-batch-script-exits-early
call activate
call conda update --yes conda
call conda install --yes conda-build
call conda create --yes --quiet --name bld --no-default-packages
call conda install --yes --name bld conda-build=${{ env.conda_build_version }}
- name: Building...
shell: cmd
run: |
call activate bld
call conda build --no-build-id --python "${{ matrix.python_version }}" --output-folder channel recipe
- name: Publishing artifact...
uses: actions/upload-artifact@v3
with:
path: "channel/*/simpleitk*.tar.bz2"

build-linux:
artifact-test:
runs-on: windows-2019
needs: build-windows
strategy:
matrix:
python_version: ['3.7', '3.8', '3.9', '3.10']
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
name: Checkout

- name: Add conda to PATH
shell: bash
run: echo "$CONDA/bin" >> $GITHUB_PATH

- name: "Creating updated environment with conda-build..."
shell: bash
run: |
source activate
conda update --yes conda
conda create --yes --quiet --name bld --no-default-packages
conda install --yes --name bld conda-build

- name: "Building conda package..."
shell: bash
run: |
set -x
source activate bld
conda build --python ${{ matrix.python_version }} --output-folder channel recipe
- uses: actions/upload-artifact@v3
with:
path: "${{github.workspace}}/channel/*/simpleitk*.tar.bz2"

build-mac:
strategy:
matrix:
python_version: ['3.7', '3.8', '3.9', '3.10']
env:
MACOSX_SDK: '10.10'
MACOSX_DEPLOYMENT_TARGET: '10.9'
runs-on: macos-11
steps:
- uses: actions/checkout@v3
name: Checkout
- name: Take ownership of conda installation
run: sudo chown -R $USER $CONDA
shell: bash
- name: Add conda to PATH
shell: bash
run: echo "$CONDA/bin" >> $GITHUB_PATH
- name: "Creating updated environment with conda-build..."
shell: bash
run: |
set -x
sudo xcode-select --switch /Applications/Xcode_11.7.0.app
xcode-select -p

# https://docs.conda.io/projects/conda-build/en/latest/resources/compiler-tools.html?highlight=CONDA_BUILD_SYSROOT#macos-sdk
echo "Downloading ${MACOSX_SDK} sdk"
curl -L -O https://github.com/phracker/MacOSX-SDKs/releases/download/10.15/MacOSX${MACOSX_SDK}.sdk.tar.xz
tar -xf MacOSX${MACOSX_SDK}.sdk.tar.xz -C "$(xcode-select -p)/Platforms/MacOSX.platform/Developer/SDKs"

# path autoloaded: https://docs.conda.io/projects/conda-build/en/latest/resources/variants.html#creating-conda-build-variant-config-files
cat << EOF >> ~/conda_build_config.yml
CONDA_BUILD_SYSROOT:
- $(xcode-select -p)/Platforms/MacOSX.platform/Developer/SDKs/MacOSX${MACOSX_SDK}.sdk
MACOSX_DEPLOYMENT_TARGET:
- ${MACOSX_DEPLOYMENT_TARGET}
EOF

source activate
conda update --yes conda
conda create --yes --quiet --name bld --no-default-packages
conda install --yes --name bld conda-build
- name: "Building conda package..."
shell: bash
run: |
export PYTHONUNBUFFERED=1
set -x
source activate bld
conda build --python ${{ matrix.python_version }} --output-folder channel recipe
- uses: actions/upload-artifact@v3
with:
path: "${{github.workspace}}/channel/*/simpleitk*.tar.bz2"

publish:
environment:
name: release
runs-on: ubuntu-latest
if: ${{ github.event_name != 'pull_request' }}
needs: [build-windows, build-linux, build-mac, set-anaconda-tag]
python_version: ['3.8', '3.9', '3.10', '3.11']

steps:
- uses: actions/download-artifact@v3
- name: Verify files
run: ls -LR

- name: Add conda to PATH
run: |
ls -LR artifact
shell: bash
run: echo "$CONDA/bin" >> $GITHUB_PATH
- name: Add Conda
uses: conda-incubator/setup-miniconda@v2
with:
auto-update-conda: true
python-version: ${{ matrix.python_version }}
conda-build-version: ${{ env.conda_build_version }}

- name: "Creating updated environment with conda-build..."
shell: bash
- name: Install Artifact
run: |
source activate
conda update --yes conda
conda install --yes anaconda-client

- name: Sign into anaconda and upload
which python
conda list
conda info --all
conda index artifact
conda install --channel ./artifact simpleitk
- name: Test
run: |
anaconda upload --force --no-progress --user ${ANACONDA_ORGANIZATION} --label ${ANACONDA_LABEL} ./artifact/*/*.tar.bz2
env:
ANACONDA_ORGANIZATION: simpleitk
ANACONDA_API_TOKEN: ${{ secrets.ANACONDA_API_TOKEN }}
ANACONDA_LABEL: ${{needs.set-anaconda-tag.outputs.anaconda-tag}}
python -c "import SimpleITK; print(SimpleITK.__version__)"
8 changes: 2 additions & 6 deletions recipe/bld.bat
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,8 @@ set CXXFLAGS=/MP
set CFLAGS=/MP

REM Configure Step
cmake -T "v141,host=x64" -G "Visual Studio 16 2019" ^
cmake -G Ninja ^
-D CMAKE_BUILD_TYPE:STRING=MinSizeRel ^
-D SimpleITK_BUILD_DISTRIBUTE:BOOL=ON ^
-D BUILD_SHARED_LIBS:BOOL=OFF ^
-D BUILD_TESTING:BOOL=OFF ^
Expand All @@ -24,11 +25,6 @@ cmake -T "v141,host=x64" -G "Visual Studio 16 2019" ^
-D ITK_USE_SYSTEM_TIFF:BOOL=ON ^
-D ITK_USE_SYSTEM_ZLIB:BOOL=ON ^
-D Module_ITKTBB:BOOL=ON ^
-D "CMAKE_FIND_ROOT_PATH:PATH=%PREFIX%" ^
-D "CMAKE_FIND_ROOT_PATH_MODE_INCLUDE:STRING=ONLY" ^
-D "CMAKE_FIND_ROOT_PATH_MODE_LIBRARY:STRING=ONLY" ^
-D "CMAKE_FIND_ROOT_PATH_MODE_PROGRAM:STRING=NEVER" ^
-D "CMAKE_FIND_ROOT_PATH_MODE_PACKAGE:STRING=ONLY" ^
-D "SWIG_EXECUTABLE:FILEPATH=%BUILD_PREFIX%\Library\bin\swig.exe" ^
-D "CMAKE_PROGRAM_PATH=%BUILD_PREFIX%" ^
-D "PYTHON_EXECUTABLE:FILEPATH=%PYTHON%" ^
Expand Down