Popular repositories Loading

1. pyclone pyclone Public

   Probabilistic model for inferring clonal population structure from deep NGS sequencing.

   Python 116 36

2. pyclone-vi pyclone-vi Public

   Fast method for inferring cancer clonal population structure from SNV data.

   Python 66 13

3. pgsm pgsm Public

   Python 12 2

4. contra_workshop contra_workshop Public

   Notes from the CONTRA cancer evolution workshop

   Tcl 7 1

5. SpatialSort SpatialSort Public

   A spatially aware Bayesian clustering approach that allows for the incorporation of prior biological knowledge.

   Python 5

6. PhyClone PhyClone Public

   Accurate Bayesian reconstruction of cancer phylogenies from bulk sequencing.

   Python 5 1