Test data

Load packages

library(ArchR)
library(SpectralTAD)
library(plotgardener)
library(RWireX)

We will need to set up our R session to use ArchR.

addArchRThreads(threads = 16) 
addArchRGenome("hg38")

Download test data

data_paths <- downloadVignetteData()

Import test data

proj <- loadArchRProject(data_paths$proj)
PeakSet <- readRDS(data_paths$peaks)