[WIP] Str counts #37
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[WIP] Str counts #37
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hdashnow
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…stage no longer required. Additional functionality commented out
…y reads. Use locuscoverage only for stats
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Have the locus_counts script also report STR_coverage (from the bam index and additional both in pair on decoy calculations)
Use counts of read where both in the pair map to the STR decoy to estimate a maximum allele size
Do some rounding of values in STRs.tsv to make it easier to read.