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MGH_GCS_Study

MGH grand challenge study

Setup

pip install -r requirements.txt

Pipeline

Creating features

for all features, run the respective .py file under feature_generation module. Run survey_label_individualization.py after running survey_features.py. After extracting all features, run combine_features.py.

Imputation

run HDRS_imputation/imputation_survey.py the results will go to factors/[measure]_imputation

Prediction

run HDRS_prediction/ensemble_per_modality.py (You can change the modalities of interest in the my_constants.py file)

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