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Supporting python modules for "Constriction of actin rings by passive crosslinkers"

Python package for the dynamics analysis of Ref. 1.

This package is primarily for creating plots for the solutions of differential equations that are solved with another package, (ActinFriction.jl).

Installation

This package was developed and used on Linux. It is available on the PyPI respository. It can be installed by running

pip install actinrings

If you do not have root access and it does not automatically default to installing locally, the --user flag may be used. To install directly from this repository, run

python -m build
pip install dist/actinrings-[current version]-py3-none-any.whl

To run the above, it may be necessary to update a few packages:

python3 -m pip install --upgrade pip setuptools wheel

For more information on building and installing python packages, see the documentation from the Python Packaging Authority.

References

[1] A. Cumberworth and P. R. ten Wolde, Constriction of actin rings by passive crosslinkers, arXiv:2203.04260 [physics.bio-ph].

Links

Python Packaging Authority

ActinFriction.jl

Replication package Ref. 1

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