diff --git a/src/methods_segmentation/cellpose/config.vsh.yaml b/src/methods_segmentation/cellpose/config.vsh.yaml
index 4d9c5a2a..f43d741b 100644
--- a/src/methods_segmentation/cellpose/config.vsh.yaml
+++ b/src/methods_segmentation/cellpose/config.vsh.yaml
@@ -85,8 +85,8 @@ engines:
       - type: python
         pypi: cellpose<4.0.0
     __merge__: 
-      - /src/base/setup_spatialdata_partial.yaml
       - /src/base/setup_txsim_partial.yaml
+      - /src/base/setup_spatialdata_partial.yaml
   - type: native
 
 runners:
diff --git a/src/methods_segmentation/watershed/config.vsh.yaml b/src/methods_segmentation/watershed/config.vsh.yaml
index 0147f06a..fb17c4b9 100644
--- a/src/methods_segmentation/watershed/config.vsh.yaml
+++ b/src/methods_segmentation/watershed/config.vsh.yaml
@@ -165,8 +165,8 @@ engines:
   - type: docker
     image: openproblems/base_python:1
     __merge__: 
-      - /src/base/setup_spatialdata_partial.yaml
       - /src/base/setup_txsim_partial.yaml
+      - /src/base/setup_spatialdata_partial.yaml
   - type: native
 
 runners:
diff --git a/src/methods_transcript_assignment/pciseq/config.vsh.yaml b/src/methods_transcript_assignment/pciseq/config.vsh.yaml
index 1cbfefbc..21a2afdf 100644
--- a/src/methods_transcript_assignment/pciseq/config.vsh.yaml
+++ b/src/methods_transcript_assignment/pciseq/config.vsh.yaml
@@ -151,8 +151,8 @@ engines:
   - type: docker
     image: openproblems/base_python:1
     __merge__: 
-      - /src/base/setup_spatialdata_partial.yaml
       - /src/base/setup_txsim_partial.yaml
+      - /src/base/setup_spatialdata_partial.yaml
     setup:
       - type: python
         github: [acycliq/pciSeq@issue_14]