RHAIENG-286: 2025b images package upgrade (#2414)

* Upgrade CodeServer packages for 2025b

* Upgrade Jupyter DataScience packages for 2025b

* Upgrade Jupyter Minimal packages for 2025b

* Upgrade Jupyter PyTorch LLMCompressor packages for 2025b

* Upgrade Jupyter PyTorch packages for 2025b

* Upgrade Jupyter ROCm PyTorch packages for 2025b

* Upgrade Jupyter ROCm TensorFlow packages for 2025b

* Upgrade Jupyter TensorFlow packages for 2025b

* Upgrade Jupyter TrustyAI packages for 2025b

* Upgrade RStudio packages for 2025b

* Upgrade Runtime images for 2025b

* Update Makefile's RELEASE flag to `2025b` version

* Change build-args to use CUDA 12.8 instead of CUDA 12.6

* Fix tests, manifests and try to ensure consistency between packages and images

* Fix minor package version check and ruff linter issues

* Add missing comma to tuples on tests

* Ignore RUFF's COM819 about commas and lists

* Use RUFF format to fix minor indentation issues

* Update wrong CodeFlare SDK version on packages to standardize them

* Update build-args for ROCm-based images to use ROCm v6.4 instead of ROCm v6.2

Author: daniellutz

Makefile

@@ -19,7 +19,7 @@ endif
 .RECIPEPREFIX =
 
 IMAGE_REGISTRY   ?= quay.io/opendatahub/workbench-images
-RELEASE	 		 ?= 2025a
+RELEASE	 		 ?= 2025b
 RELEASE_PYTHON_VERSION	 ?= 3.12
 # additional user-specified caching parameters for $(CONTAINER_ENGINE) build
 CONTAINER_BUILD_CACHE_ARGS ?= --no-cache

ci/package_versions.py

@@ -129,7 +129,8 @@ def main():
                 software.append(f"{sw_name}: {sw_version}")
 
             # in 2.16.1 we only have RStudio as tech preview, and that is not a prebuilt image we ship
-            maybe_techpreview = "" if name not in () else " (Technology Preview)"
+            tech_preview_names = ()  # or define the actual names you want to check
+            maybe_techpreview = "" if name not in tech_preview_names else " (Technology Preview)"
             maybe_recommended = "" if not recommended or len(imagestream.tags) == 1 else " (Recommended)"
 
             tabular_data.append(

codeserver/ubi9-python-3.12/pylock.toml

@@ -6,28 +6,28 @@ requires-python = "==3.12.*"
 dependencies = [
     # Base packages
     "wheel~=0.45.1",
-    "setuptools~=78.1.1",
+    "setuptools~=80.9.0",
 
     # Datascience packages
     "boto3~=1.40.27",
     "kafka-python-ng~=2.2.3",
-    "matplotlib~=3.10.1",
-    "numpy~=2.2.6",
-    "pandas~=2.2.3",
-    "plotly~=6.0.0",
-    "scikit-learn~=1.6.1",
-    "scipy~=1.15.2",
-    "skl2onnx~=1.18.0",
-    "ipykernel~=6.29.5",
-    "kubeflow-training==1.9.2",
+    "matplotlib~=3.10.6",
+    "numpy~=2.3.3",
+    "pandas~=2.3.2",
+    "plotly~=6.3.0",
+    "scikit-learn~=1.7.2",
+    "scipy~=1.16.1",
+    "skl2onnx~=1.19.1",
+    "ipykernel~=6.30.1",
+    "kubeflow-training==1.9.3",
     "feast~=0.53.0",
 
     # Some extra useful packages
     "opencensus~=0.11.4",
-    "smart-open~=7.0.1",
-    "virtualenv~=20.29.3",
-    "py-spy~=0.4.0",
-    "prometheus-client~=0.21.1",
+    "smart-open~=7.3.1",
+    "virtualenv~=20.34.0",
+    "py-spy~=0.4.1",
+    "prometheus-client~=0.22.1",
 ]
 
 [tool.uv]

codeserver/ubi9-python-3.12/pyproject.toml

@@ -8,34 +8,34 @@ dependencies = [
     "boto3~=1.40.27",
     "kafka-python-ng~=2.2.3",
     "kfp~=2.14.3",
-    "matplotlib~=3.10.1",
-    "numpy~=2.2.6",
-    "pandas~=2.2.3",
-    "plotly~=6.0.0",
-    "scikit-learn~=1.6.1",
-    "scipy~=1.15.2",
-    "skl2onnx~=1.18.0",
+    "matplotlib~=3.10.6",
+    "numpy~=2.3.3",
+    "pandas~=2.3.2",
+    "plotly~=6.3.0",
+    "scikit-learn~=1.7.2",
+    "scipy~=1.16.1",
+    "skl2onnx~=1.19.1",
     "onnxconverter-common~=1.13.0", # Required for skl2onnx, as upgraded version is not compatible with protobuf
     "kubeflow-training==1.9.3",
     "codeflare-sdk~=0.31.1; platform_machine != 'ppc64le' and platform_machine != 's390x'",
     "feast~=0.53.0",
 
     # DB connectors
-    "pymongo~=4.11.2",
-    "psycopg~=3.2.5",
+    "pymongo~=4.14.1",
+    "psycopg~=3.2.10",
     "pyodbc~=5.2.0",
-    "mysql-connector-python~=9.3.0",
+    "mysql-connector-python~=9.4.0",
 
     # JupyterLab packages
     "odh-elyra==4.2.4",
     "odh-jupyter-trash-cleanup==0.1.1",
 
-    "jupyterlab==4.4.4",
+    "jupyterlab==4.4.7",
     "jupyter-bokeh~=4.0.5",
-    "jupyter-server~=2.16.0",
+    "jupyter-server~=2.17.0",
     "jupyter-server-proxy~=4.4.0",
     "jupyter-server-terminals~=0.5.3",
-    "jupyterlab-git~=0.51.1",
+    "jupyterlab-git~=0.51.2",
     "jupyterlab-lsp~=5.1.1",
     "jupyterlab-widgets~=3.0.15",
     "jupyter-resource-usage~=1.1.1",
@@ -44,7 +44,7 @@ dependencies = [
 
     # Base packages
     "wheel~=0.45.1",
-    "setuptools~=78.1.1",
+    "setuptools~=80.9.0",
 ]
 
 [tool.uv]

jupyter/datascience/ubi9-python-3.12/pylock.toml

@@ -1 +1 @@
-BASE_IMAGE=quay.io/opendatahub/odh-base-image-cuda-py312-ubi9:v12.6
+BASE_IMAGE=quay.io/opendatahub/odh-base-image-cuda-py312-ubi9:v12.8

jupyter/datascience/ubi9-python-3.12/pyproject.toml

@@ -682,9 +682,9 @@ wheels = [{ url = "https://files.pythonhosted.org/packages/1a/60/1f6cee0c46263de
 
 [[packages]]
 name = "jupyter-server"
-version = "2.16.0"
-sdist = { url = "https://files.pythonhosted.org/packages/41/c8/ba2bbcd758c47f1124c4ca14061e8ce60d9c6fd537faee9534a95f83521a/jupyter_server-2.16.0.tar.gz", upload-time = 2025-05-12T16:44:46Z, size = 728177, hashes = { sha256 = "65d4b44fdf2dcbbdfe0aa1ace4a842d4aaf746a2b7b168134d5aaed35621b7f6" } }
-wheels = [{ url = "https://files.pythonhosted.org/packages/46/1f/5ebbced977171d09a7b0c08a285ff9a20aafb9c51bde07e52349ff1ddd71/jupyter_server-2.16.0-py3-none-any.whl", upload-time = 2025-05-12T16:44:43Z, size = 386904, hashes = { sha256 = "3d8db5be3bc64403b1c65b400a1d7f4647a5ce743f3b20dbdefe8ddb7b55af9e" } }]
+version = "2.17.0"
+sdist = { url = "https://files.pythonhosted.org/packages/5b/ac/e040ec363d7b6b1f11304cc9f209dac4517ece5d5e01821366b924a64a50/jupyter_server-2.17.0.tar.gz", upload-time = 2025-08-21T14:42:54Z, size = 731949, hashes = { sha256 = "c38ea898566964c888b4772ae1ed58eca84592e88251d2cfc4d171f81f7e99d5" } }
+wheels = [{ url = "https://files.pythonhosted.org/packages/92/80/a24767e6ca280f5a49525d987bf3e4d7552bf67c8be07e8ccf20271f8568/jupyter_server-2.17.0-py3-none-any.whl", upload-time = 2025-08-21T14:42:52Z, size = 388221, hashes = { sha256 = "e8cb9c7db4251f51ed307e329b81b72ccf2056ff82d50524debde1ee1870e13f" } }]
 
 [[packages]]
 name = "jupyter-server-mathjax"
@@ -706,9 +706,9 @@ wheels = [{ url = "https://files.pythonhosted.org/packages/07/2d/2b32cdbe8d2a602
 
 [[packages]]
 name = "jupyterlab"
-version = "4.4.4"
-sdist = { url = "https://files.pythonhosted.org/packages/e2/4d/7ca5b46ea56742880d71a768a9e6fb8f8482228427eb89492d55c5d0bb7d/jupyterlab-4.4.4.tar.gz", upload-time = 2025-06-28T13:07:20Z, size = 23044296, hashes = { sha256 = "163fee1ef702e0a057f75d2eed3ed1da8a986d59eb002cbeb6f0c2779e6cd153" } }
-wheels = [{ url = "https://files.pythonhosted.org/packages/f8/82/66910ce0995dbfdb33609f41c99fe32ce483b9624a3e7d672af14ff63b9f/jupyterlab-4.4.4-py3-none-any.whl", upload-time = 2025-06-28T13:07:15Z, size = 12296310, hashes = { sha256 = "711611e4f59851152eb93316c3547c3ec6291f16bb455f1f4fa380d25637e0dd" } }]
+version = "4.4.7"
+sdist = { url = "https://files.pythonhosted.org/packages/d0/07/b3beaeb5722d4a55e345a38884c67baebd9cec2269c5309ce494485a5858/jupyterlab-4.4.7.tar.gz", upload-time = 2025-09-03T13:26:40Z, size = 22965570, hashes = { sha256 = "8c8e225492f4513ebde9bbbc00a05b651ab9a1f5b0013015d96fabf671c37188" } }
+wheels = [{ url = "https://files.pythonhosted.org/packages/7e/01/44f35124896dd5c73b26705c25bb8af2089895b32f057a1e4a3488847333/jupyterlab-4.4.7-py3-none-any.whl", upload-time = 2025-09-03T13:26:35Z, size = 12291583, hashes = { sha256 = "808bae6136b507a4d18f04254218bfe71ed8ba399a36ef3280d5f259e69abf80" } }]
 
 [[packages]]
 name = "jupyterlab-git"
@@ -977,12 +977,6 @@ version = "0.1.1"
 sdist = { url = "https://files.pythonhosted.org/packages/c7/77/19ddf2683bcf03ef73ff6f5d68e51ef6d6ff8c5ba4024f2330009dcc71ff/odh_jupyter_trash_cleanup-0.1.1.tar.gz", upload-time = 2025-09-18T14:04:56Z, size = 27480, hashes = { sha256 = "d97d3a6c70fcf4e47041dc89445505ba6b6964c9319254917f30393b656e6b5c" } }
 wheels = [{ url = "https://files.pythonhosted.org/packages/5e/c2/37eaa2c4efd7c1a6403aaa59822f0df2730b0f43b3fc274f4bd14998bd12/odh_jupyter_trash_cleanup-0.1.1-py3-none-any.whl", upload-time = 2025-09-18T14:04:55Z, size = 27553, hashes = { sha256 = "19b409372d5781937b42e047bf23503f4d602461765a9b145b0a6974cd090623" } }]
 
-[[packages]]
-name = "overrides"
-version = "7.7.0"
-sdist = { url = "https://files.pythonhosted.org/packages/36/86/b585f53236dec60aba864e050778b25045f857e17f6e5ea0ae95fe80edd2/overrides-7.7.0.tar.gz", upload-time = 2024-01-27T21:01:33Z, size = 22812, hashes = { sha256 = "55158fa3d93b98cc75299b1e67078ad9003ca27945c76162c1c0766d6f91820a" } }
-wheels = [{ url = "https://files.pythonhosted.org/packages/2c/ab/fc8290c6a4c722e5514d80f62b2dc4c4df1a68a41d1364e625c35990fcf3/overrides-7.7.0-py3-none-any.whl", upload-time = 2024-01-27T21:01:31Z, size = 17832, hashes = { sha256 = "c7ed9d062f78b8e4c1a7b70bd8796b35ead4d9f510227ef9c5dc7626c60d7e49" } }]
-
 [[packages]]
 name = "packaging"
 version = "25.0"
@@ -1538,9 +1532,9 @@ wheels = [{ url = "https://files.pythonhosted.org/packages/40/b0/4562db6223154aa
 
 [[packages]]
 name = "setuptools"
-version = "78.1.1"
-sdist = { url = "https://files.pythonhosted.org/packages/81/9c/42314ee079a3e9c24b27515f9fbc7a3c1d29992c33451779011c74488375/setuptools-78.1.1.tar.gz", upload-time = 2025-04-19T18:23:36Z, size = 1368163, hashes = { sha256 = "fcc17fd9cd898242f6b4adfaca46137a9edef687f43e6f78469692a5e70d851d" } }
-wheels = [{ url = "https://files.pythonhosted.org/packages/90/99/158ad0609729111163fc1f674a5a42f2605371a4cf036d0441070e2f7455/setuptools-78.1.1-py3-none-any.whl", upload-time = 2025-04-19T18:23:34Z, size = 1256462, hashes = { sha256 = "c3a9c4211ff4c309edb8b8c4f1cbfa7ae324c4ba9f91ff254e3d305b9fd54561" } }]
+version = "80.9.0"
+sdist = { url = "https://files.pythonhosted.org/packages/18/5d/3bf57dcd21979b887f014ea83c24ae194cfcd12b9e0fda66b957c69d1fca/setuptools-80.9.0.tar.gz", upload-time = 2025-05-27T00:56:51Z, size = 1319958, hashes = { sha256 = "f36b47402ecde768dbfafc46e8e4207b4360c654f1f3bb84475f0a28628fb19c" } }
+wheels = [{ url = "https://files.pythonhosted.org/packages/a3/dc/17031897dae0efacfea57dfd3a82fdd2a2aeb58e0ff71b77b87e44edc772/setuptools-80.9.0-py3-none-any.whl", upload-time = 2025-05-27T00:56:49Z, size = 1201486, hashes = { sha256 = "062d34222ad13e0cc312a4c02d73f059e86a4acbfbdea8f8f76b28c99f306922" } }]
 
 [[packages]]
 name = "simpervisor"

jupyter/minimal/ubi9-python-3.12/build-args/cuda.conf

@@ -7,17 +7,17 @@ dependencies = [
     # JupyterLab packages
     "odh-jupyter-trash-cleanup==0.1.1",
 
-    "jupyterlab==4.4.4",
-    "jupyter-server~=2.16.0",
+    "jupyterlab==4.4.7",
+    "jupyter-server~=2.17.0",
     "jupyter-server-proxy~=4.4.0",
     "jupyter-server-terminals~=0.5.3",
-    "jupyterlab-git~=0.51.1",
+    "jupyterlab-git~=0.51.2",
     "nbdime~=4.0.2",
     "nbgitpuller~=1.2.2",
 
     # Base packages
     "wheel~=0.45.1",
-    "setuptools~=78.1.1",
+    "setuptools~=80.9.0",
 ]
 
 [tool.uv]

jupyter/minimal/ubi9-python-3.12/pylock.toml

@@ -1 +1 @@
-BASE_IMAGE=quay.io/opendatahub/odh-base-image-cuda-py312-ubi9:v12.6
+BASE_IMAGE=quay.io/opendatahub/odh-base-image-cuda-py312-ubi9:v12.8