no deseq2 folder in the results directory

[HYan-lei]

I run the nf-core/salmseq successfully, but no deseq2 folder in the results directory. it looks deseq2 also run but no output. Can anyone please give me some suggestions? Thanks.

I used nextflow/22.10.2

[32/5909c7] process > gtf2bed (genes.gtf) [100%] 1 of 1 ✔
[3d/23c3ea] process > get_software_versions [100%] 1 of 1 ✔
[2d/6c7ef7] process > checkDesign (Xingyu_SLAM_12... [100%] 1 of 1 ✔
[dd/5faefe] process > trim (Empt_Dox_3) [100%] 13 of 13 ✔
[6e/0a827d] process > map (MYCN_Dox_3) [100%] 13 of 13 ✔
[3b/39f2e5] process > filter (MYCN_Dox_3) [100%] 13 of 13 ✔
[36/ad606c] process > snp (MYCN_Dox_3) [100%] 13 of 13 ✔
[b6/0b8da9] process > count (MYCN_Dox_3) [100%] 13 of 13 ✔
[6c/d87250] process > collapse (MYCN_Dox_3) [100%] 13 of 13 ✔
[b0/bcf907] process > rates (MYCN_Dox_3) [100%] 13 of 13 ✔
[4b/cfa755] process > utrrates (MYCN_Dox_3) [100%] 13 of 13 ✔
[5f/d9c1a3] process > tcperreadpos (MYCN_Dox_3) [100%] 13 of 13 ✔
[21/0c7d5f] process > tcperutrpos (MYCN_Dox_3) [100%] 13 of 13 ✔
[5c/79119c] process > summary [100%] 1 of 1 ✔
[60/2b1f36] process > deseq2 (3) [100%] 3 of 3 ✔
[33/f376a7] process > multiqc (1) [100%] 1 of 1 ✔
[77/374cd3] process > output_documentation [100%] 1 of 1 ✔
-[nf-core/slamseq] Pipeline completed successfully-
Completed at: 06-Dec-2023 02:25:11
Duration : 4h 24m 3s
CPU hours : 116.8
Succeeded : 139