Include/exclude files are not using Pathoplexus accessions

[victorlin]

from #16 (comment)

The workflow has been updated to work with Pathoplexus data, however the ids in the include/exclude files were not updated accordingly.

ebola/phylogenetic/defaults/exclude.txt

Lines 1 to 7 in 0dee7a3

	EM_074335 # lack country metadata
	EM_074462 # lack country metadata
	G5364.1 # overly divergent
	G4837.1 # overly divergent
	LIBR10201 # overly divergent
	MK0868 # overly divergent
	PL7375 # overly divergent

ebola/phylogenetic/defaults/west-africa-2014/include.txt

Line 1 in 0dee7a3

EM_076610 # flare-up index case