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What's the -T1, T2, T3, T4, T5 in the GBK file means after the funannotate update command? #1133

@RunJiaJi

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@RunJiaJi

Dear developers,

Thank you for funannotate!
I'm new to fungal genomic research and I'm trying to use funannotate (version: 1.8.17) to analyse my own fungal genome.

I followed the tutorial here: https://funannotate.readthedocs.io/en/latest/tutorials.html#genome-assembly-and-rna-seq

And I've gone to here: funannotate remote -i fun -m antismash -e jirunjia17@mails.ucas.ac.cn

But the antiSMASH result never comes back, so I uploaded my GBK file onto the antiSMASH webserver for online anlayse. Then it says "ERROR: Multiple CDS features have the same location".

I look into my GBK file, and found a lot CDS with overlapped or identical location, namely with the suffix "-T1, T2, T3, T4, T5".

Can you please tell me what those "-T1, T2, T3, T4, T5" means and how should I proceed?

Thank you in advance! :)

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