Remove categories from supporting pages

ctrueden · ctrueden · commit b732f21e18f5 · 2021-06-04T16:58:36.000-05:00
These are pages supporting specific plugins, which themselves already
have categories. We don't want all these supporting pages showing up the
list of extensions.
diff --git a/_pages/plugins/analyze-skeleton/2d-time-series.md b/_pages/plugins/analyze-skeleton/2d-time-series.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Analyze_Skeleton_2D_time_series
 title: Analyze Skeleton 2D time series
-categories: [Jython,Scripting,Analysis,Skeleton]
 ---
 
 ## Introduction:
diff --git a/_pages/plugins/analyze-skeleton/video-tutorial.md b/_pages/plugins/analyze-skeleton/video-tutorial.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Skeleton_analysis_video_tutorial
 title: Skeleton analysis video tutorial
-categories: [Tutorials]
 ---
 
 This video tutorial was made by Javier Cabrera-Chaves and edited by {% include person id='iarganda' %} using [Wink 1.5 for linux](http://www.debugmode.com/wink/), then converted from Adobe Flash to a plain video by {% include person id='smgriffin2' %}.
diff --git a/_pages/plugins/bdv/example-datasets.md b/_pages/plugins/bdv/example-datasets.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: BigDataViewer_Example_Datasets
 title: BigDataViewer Example Datasets
-categories: [Example Data]
 ---
 
 This page links to example datasets for the [BigDataViewer](/plugins/bdv) Fiji plugin. See the [BigDataViewer](/plugins/bdv) user guide.
diff --git a/_pages/plugins/dhm-utilities/multi-image-landmark-correspondences.md b/_pages/plugins/dhm-utilities/multi-image-landmark-correspondences.md
@@ -1,9 +1,7 @@
 ---
 mediawiki: DHM_Utilities/Multi-Image_Landmark_Correspondences
 title: DHM Utilities/Multi-Image Landmark Correspondences
-categories: [Uncategorized]
 project: DHM Utilities
-
 name: Multi-Image Landmark Correspondences
 source-url: https://github.com/sudgy/multi-landmark
 license-url: /licensing/lgpl
diff --git a/_pages/plugins/dhm-utilities/phase-unwrapping.md b/_pages/plugins/dhm-utilities/phase-unwrapping.md
@@ -1,9 +1,7 @@
 ---
 mediawiki: DHM_Utilities/Phase_Unwrapping
 title: DHM Utilities/Phase Unwrapping
-categories: [Uncategorized]
 project: DHM Utilities
-
 name: Phase Unwrapping
 source-url: https://github.com/sudgy/phase-unwrapping
 license-url: /licensing/lgpl
diff --git a/_pages/plugins/dhm-utilities/reconstruction.md b/_pages/plugins/dhm-utilities/reconstruction.md
@@ -1,9 +1,7 @@
 ---
 mediawiki: DHM_Utilities/Reconstruction
 title: DHM Utilities/Reconstruction
-categories: [Uncategorized]
 project: DHM Utilities
-
 name: Reconstruction
 source-url: https://github.com/sudgy/reconstruction
 license-url: /licensing/lgpl
diff --git a/_pages/plugins/mamut/example-properties-file.md b/_pages/plugins/mamut/example-properties-file.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Example_mamut.properties_file
 title: Example mamut.properties file
-categories: [Tutorials]
 ---
 
 The key-bindings used in the [MaMuT](/plugins/mamut) viewer can be customized through a text file, that allow you to remap any command to any key. To so, create a text file named `mamut.properties` in the `Fiji.app` folder (where the `plugins` and `jars` folders are). This file must follow this syntax example:
diff --git a/_pages/plugins/mtrack/advanced-mode.md b/_pages/plugins/mtrack/advanced-mode.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Advanced_mode(MTrack)
 title: Advanced mode(MTrack)
-categories: [Tutorials]
 ---
 
 ## Object recognition methods
diff --git a/_pages/plugins/mtrack/more-on-microtubule-polarity.md b/_pages/plugins/mtrack/more-on-microtubule-polarity.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Read_more_on_microtubule_polarity_and_(+)_end_vs._(-)_end_tracking
 title: Read more on microtubule polarity and (+) end vs. (-) end tracking
-categories: [Tutorials]
 ---
 
 ## Microtubule polarity and (+) end vs. (-) end tracking
diff --git a/_pages/plugins/mtrack/more-on-mser-parameters.md b/_pages/plugins/mtrack/more-on-mser-parameters.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Read_more_about_MSER_parameters
 title: Read more about MSER parameters
-categories: [Tutorials]
 ---
 
 ## MSER parameters
diff --git a/_pages/plugins/mtrack/more-on-preprocessing.md b/_pages/plugins/mtrack/more-on-preprocessing.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Read_more_about_Preprocessing
 title: Read more about Preprocessing
-categories: [Tutorials]
 ---
 
 ## Pre-Processing
diff --git a/_pages/plugins/mtrack/more-on-ransac-parameters.md b/_pages/plugins/mtrack/more-on-ransac-parameters.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Read_more_about_the_RANSAC_parameters
 title: Read more about the RANSAC parameters
-categories: [Tutorials]
 ---
 
 Ransac finds segments in the data using the model chosen for doing the fitting. In order to constrain the form of segments it finds there are certain parameters that user may have to choose to suit to their data. They are enumerated here.
diff --git a/_pages/plugins/mtrack/more-on-ransac.md b/_pages/plugins/mtrack/more-on-ransac.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Read_more_on_RANSAC_models
 title: Read more on RANSAC models
-categories: [Tutorials]
 ---
 
 Ransac models used in the MTrack include the line and polynomial models to perform the determination of inliers. SInce the underlying process of Microtubule dynamics is a random walk process, in order to determine the inliers it is essential to choose a polynomial to determine the inliers from the length versus time plots. The user has the option of choosing either a second order or a third order polynomial regularized with a linear function.
diff --git a/_pages/plugins/mtrack/mser-segmentation-method.md b/_pages/plugins/mtrack/mser-segmentation-method.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: MSER_as_the_segmentation_method
 title: MSER as the segmentation method
-categories: [Tutorials]
 ---
 
 After making this choice of segmentation in the advanced mode the following panel appears
diff --git a/_pages/plugins/mtrack/watershed-hough-parameters.md b/_pages/plugins/mtrack/watershed-hough-parameters.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Watershedding_and_Hough_transform_parameters
 title: Watershedding and Hough transform parameters
-categories: [Tutorials]
 ---
 
 In this method an intensity threshold value is used to create a binary image on which a distance transform is performed to create a distance transformed image. This distance transformed image is then segmented by watershedding. The user has one parameter to choose here which is the intensity threshold value.
diff --git a/_pages/plugins/mtrack/watershed-mser.md b/_pages/plugins/mtrack/watershed-mser.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Watershed_followed_by_MSER
 title: Watershed followed by MSER
-categories: [Tutorials]
 ---
 
 After making this choice of segmentation in the advanced mode the following panel appears
diff --git a/_pages/plugins/simple-neurite-tracer/basic-instructions.md b/_pages/plugins/simple-neurite-tracer/basic-instructions.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Simple_Neurite_Tracer:_Basic_Instructions
 title: Simple Neurite Tracer › Basic Instructions
-categories: [Tutorials]
 nav-links: true
 nav-title: Basic Instructions
 ---
diff --git a/_pages/plugins/simple-neurite-tracer/export-to-swc-tutorial.md b/_pages/plugins/simple-neurite-tracer/export-to-swc-tutorial.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Simple_Neurite_Tracer:_"Export_to_SWC"_Tutorial
 title: Simple Neurite Tracer › "Export to SWC" Tutorial
-categories: [Tutorials]
 nav-links: true
 nav-title: Exporting to SWC
 ---
diff --git a/_pages/plugins/simple-neurite-tracer/preprocessing-data-for-better-results.md b/_pages/plugins/simple-neurite-tracer/preprocessing-data-for-better-results.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Simple_Neurite_Tracer:_Preprocessing_Data_for_Better_Results
 title: Simple Neurite Tracer › Preprocessing Data for Better Results
-categories: [Tutorials]
 nav-links: true
 nav-title: Preprocessing Data
 ---
diff --git a/_pages/plugins/simple-neurite-tracer/selecting-paths.md b/_pages/plugins/simple-neurite-tracer/selecting-paths.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Simple_Neurite_Tracer:_Selecting_paths
 title: Simple Neurite Tracer › Selecting paths
-categories: [Tutorials]
 nav-links: true
 nav-title: Selecting Paths
 ---
diff --git a/_pages/plugins/simple-neurite-tracer/sholl-analysis.md b/_pages/plugins/simple-neurite-tracer/sholl-analysis.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Simple_Neurite_Tracer:_Sholl_analysis
 title: Simple Neurite Tracer › Sholl Analysis
-categories: [Tutorials]
 nav-links: true
 nav-title: Sholl Analysis
 ---
diff --git a/_pages/plugins/simple-neurite-tracer/step-by-step-instructions.md b/_pages/plugins/simple-neurite-tracer/step-by-step-instructions.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Simple_Neurite_Tracer:_Step-By-Step_Instructions
 title: Simple Neurite Tracer › Step-By-Step Instructions
-categories: [Tutorials]
 nav-links: true
 nav-title: Step-By-Step Instructions
 ---
diff --git a/_pages/plugins/simple-neurite-tracer/testing-procedure.md b/_pages/plugins/simple-neurite-tracer/testing-procedure.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Testing_Procedure_for_Simple_Neurite_Tracer
 title: Simple Neurite Tracer › Testing Procedure
-categories: [Tutorials]
 nav-links: true
 nav-title: Testing Procedure
 ---
diff --git a/_pages/plugins/simple-neurite-tracer/using-mip-overlays.md b/_pages/plugins/simple-neurite-tracer/using-mip-overlays.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Simple_Neurite_Tracer:_Using_MIP_Overlays
 title: Simple Neurite Tracer › Using MIP Overlays
-categories: [Tutorials]
 nav-links: true
 nav-title: Using MIP Overlays
 ---
diff --git a/_pages/plugins/snt/analysis.md b/_pages/plugins/snt/analysis.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: SNT:_Analysis
 title: SNT › Analysis
-categories: [SNT]
 nav-links: true
 nav-title: Analysis
 ---
diff --git a/_pages/plugins/snt/index.md b/_pages/plugins/snt/index.md
@@ -1,7 +1,7 @@
 ---
 mediawiki: SNT
 title: SNT
-categories: [Segmentation,Neuroanatomy,SNT]
+categories: [Segmentation,Neuroanatomy]
 tags: snt,reconstruction,tracing,arbor,neuron,morphometry,dendrite,axon,neuroanatomy
 nav-links: true
 nav-title: Overview
diff --git a/_pages/plugins/snt/manual.md b/_pages/plugins/snt/manual.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: SNT:_Manual
 title: SNT › Manual
-categories: [SNT, Tutorials]
 nav-links: true
 nav-title: Manual
 ---
diff --git a/_pages/plugins/snt/modeling.md b/_pages/plugins/snt/modeling.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: SNT:_Modeling
 title: SNT › Modeling
-categories: [Tutorials]
 nav-links: true
 nav-title: Modeling
 ---
diff --git a/_pages/plugins/snt/reconstruction-viewer.md b/_pages/plugins/snt/reconstruction-viewer.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: SNT:_Reconstruction_Viewer
 title: SNT › Reconstruction Viewer
-categories: [SNT]
 nav-links: true
 nav-title: Reconstruction Viewer
 ---
diff --git a/_pages/plugins/snt/scripting.md b/_pages/plugins/snt/scripting.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: SNT:_Scripting
 title: SNT › Scripting
-categories: [SNT, Tutorials]
 nav-links: true
 nav-title: Scripting
 ---
diff --git a/_pages/plugins/snt/step-by-step-instructions.md b/_pages/plugins/snt/step-by-step-instructions.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: SNT:_Step-By-Step_Instructions
 title: SNT › Step-By-Step Instructions
-categories: [SNT, Tutorials]
 nav-links: true
 nav-title: Step-By-Step Instructions
 ---
diff --git a/_pages/plugins/snt/traces-file-format.md b/_pages/plugins/snt/traces-file-format.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: SNT:_.traces_File_Format
 title: SNT › .traces File Format
-categories: [SNT]
 nav-links: true
 nav-title: .traces File Format
 ---
diff --git a/_pages/plugins/snt/tubular-geodesics.md b/_pages/plugins/snt/tubular-geodesics.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: SNT:_Tubular_Geodesics
 title: SNT › Tubular Geodesics
-categories: [Segmentation,Neuroanatomy,SNT]
 nav-links: true
 nav-title: Tubular Geodesics
 ---
diff --git a/_pages/plugins/spim-registration/method.md b/_pages/plugins/spim-registration/method.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: SPIM_Registration_Method
 title: SPIM Registration Method
-categories: Plugins,Registration
 ---
 
 ## Citation
diff --git a/_pages/plugins/spim-registration/on-cluster.md b/_pages/plugins/spim-registration/on-cluster.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: SPIM_Registration_on_cluster_(deprecated)
 title: SPIM Registration on cluster (deprecated)
-categories: [Registration]
 ---
 
 {% include notice icon="warning" content='Please Note: This version of the software is outdated. We highly recommend using the new [automated workflow](/plugins/automated-workflow-for-parallel-multiview-reconstruction). It is much more user friendly, efficient and versatile using full automation of the processing.' %}
diff --git a/_pages/plugins/trackmate/analyzing-results-with-matlab.md b/_pages/plugins/trackmate/analyzing-results-with-matlab.md
@@ -1,7 +1,6 @@
 ---
 title: Analyzing TrackMate results with MATLAB
 description: How to import and analyze TrackMate results in MATLAB.
-categories: [Tracking,Matlab,Tutorials]
 ---
 
 This page documents the various ways to exchange data between [TrackMate](/plugins/trackmate) and [MATLAB](/scripting/matlab).
diff --git a/_pages/plugins/trackmate/custom-actions.md b/_pages/plugins/trackmate/custom-actions.md
@@ -1,6 +1,5 @@
 ---
 title: How to write custom actions for TrackMate
-categories: [Tutorials]
 nav-links:
 - title: Edge Feature Analyzers
   url: /plugins/trackmate/custom-edge-feature-analyzer-algorithms
diff --git a/_pages/plugins/trackmate/custom-detection-algorithms.md b/_pages/plugins/trackmate/custom-detection-algorithms.md
@@ -1,6 +1,5 @@
 ---
 title: How to write your own detection algorithm for TrackMate
-categories: [Tutorials]
 nav-links:
 - title: Edge Feature Analyzers
   url: /plugins/trackmate/custom-edge-feature-analyzer-algorithms
diff --git a/_pages/plugins/trackmate/custom-edge-feature-analyzer-algorithms.md b/_pages/plugins/trackmate/custom-edge-feature-analyzer-algorithms.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: How_to_write_your_own_edge_feature_analyzer_algorithm_for_TrackMate
 title: How to write your own edge feature analyzer algorithm for TrackMate
-categories: [Tutorials]
 nav-links:
 - title: Edge Feature Analyzers
   url: /plugins/trackmate/custom-edge-feature-analyzer-algorithms
diff --git a/_pages/plugins/trackmate/custom-particle-linking-algorithms.md b/_pages/plugins/trackmate/custom-particle-linking-algorithms.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: How_to_write_your_own_particle-linking_algorithm_for_TrackMate
 title: How to write your own particle-linking algorithm for TrackMate
-categories: [Tutorials]
 nav-links:
 - title: Edge Feature Analyzers
   url: /plugins/trackmate/custom-edge-feature-analyzer-algorithms
diff --git a/_pages/plugins/trackmate/custom-spot-feature-analyzer-algorithms.md b/_pages/plugins/trackmate/custom-spot-feature-analyzer-algorithms.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: How_to_write_your_own_spot_feature_analyzer_algorithm_for_TrackMate
 title: How to write your own spot feature analyzer algorithm for TrackMate
-categories: [Tutorials]
 nav-links:
 - title: Edge Feature Analyzers
   url: /plugins/trackmate/custom-edge-feature-analyzer-algorithms
diff --git a/_pages/plugins/trackmate/custom-track-feature-analyzer-algorithms.md b/_pages/plugins/trackmate/custom-track-feature-analyzer-algorithms.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: How_to_write_your_own_track_feature_analyzer_algorithm_for_TrackMate
 title: How to write your own track feature analyzer algorithm for TrackMate
-categories: [Tutorials]
 nav-links:
 - title: Edge Feature Analyzers
   url: /plugins/trackmate/custom-edge-feature-analyzer-algorithms
diff --git a/_pages/plugins/trackmate/custom-viewers.md b/_pages/plugins/trackmate/custom-viewers.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: How_to_write_your_own_viewer_for_TrackMate
 title: How to write your own viewer for TrackMate
-categories: [Tutorials]
 nav-links:
 - title: Edge Feature Analyzers
   url: /plugins/trackmate/custom-edge-feature-analyzer-algorithms
diff --git a/_pages/plugins/trackmate/getting-started.md b/_pages/plugins/trackmate/getting-started.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Getting_started_with_TrackMate
 title: Getting started with TrackMate
-categories: [Tutorials]
 ---
 
 ## Introduction
diff --git a/_pages/plugins/trackmate/index.md b/_pages/plugins/trackmate/index.md
@@ -1,7 +1,7 @@
 ---
 title: TrackMate
 description: TrackMate is your buddy for your everyday tracking.
-categories: [Segmentation,Tracking,Tutorials]
+categories: [Segmentation,Tracking]
 logo: /media/logos/trackmate-300p.png
 artifact: sc.fiji:TrackMate_
 doi: 10.1016/j.ymeth.2016.09.016
diff --git a/_pages/plugins/trackmate/manual-track-editing.md b/_pages/plugins/trackmate/manual-track-editing.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Manual_editing_of_tracks_using_TrackMate
 title: Manual editing of tracks using TrackMate
-categories: [Tutorials]
 ---
 
 ## Introduction
diff --git a/_pages/plugins/trackmate/manual-tracking.md b/_pages/plugins/trackmate/manual-tracking.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Manual_tracking_with_TrackMate
 title: Manual tracking with TrackMate
-categories: [Tutorials]
 ---
 
 The previous TrackMate tutorial - [Manual editing of tracks using TrackMate](/plugins/trackmate/manual-track-editing) is dedicated to manually correcting the results of an automated process. This small tutorial here shows how to do a fully manual annotation with [TrackMate](/plugins/trackmate).
diff --git a/_pages/plugins/trackmate/scripting.md b/_pages/plugins/trackmate/scripting.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: Scripting_TrackMate
 title: Scripting TrackMate
-categories: [Scripting]
 ---
 
 ## TrackMate scripting principle
diff --git a/_pages/plugins/trackmate/trackscheme.md b/_pages/plugins/trackmate/trackscheme.md
@@ -1,7 +1,6 @@
 ---
 mediawiki: TrackScheme
 title: TrackScheme
-categories: [Tutorials]
 ---
 
 TrackScheme displays a kind of "track map", where a track is laid on pane, arranged vertically over time, as a Parisian subway train map. Each spot is displayed as a cell in the map. Each cell displays a thumbnail of the spot.
diff --git a/_pages/plugins/trackmate/using-from-matlab.md b/_pages/plugins/trackmate/using-from-matlab.md
diff --git a/_pages/plugins/trainable-segmentation/implementation.md b/_pages/plugins/trainable-segmentation/implementation.md
diff --git a/_pages/plugins/trainable-segmentation/index.md b/_pages/plugins/trainable-segmentation/index.md
diff --git a/_pages/plugins/trakem2/add-more-sections-layers-tutorial.md b/_pages/plugins/trakem2/add-more-sections-layers-tutorial.md
diff --git a/_pages/plugins/trakem2/align-sections-tutorial.md b/_pages/plugins/trakem2/align-sections-tutorial.md
diff --git a/_pages/plugins/trakem2/basics-tutorial.md b/_pages/plugins/trakem2/basics-tutorial.md
diff --git a/_pages/plugins/trakem2/measurements-tutorial.md b/_pages/plugins/trakem2/measurements-tutorial.md
diff --git a/_pages/plugins/trakem2/saving-project-tutorial.md b/_pages/plugins/trakem2/saving-project-tutorial.md
diff --git a/_pages/plugins/trakem2/scripting.md b/_pages/plugins/trakem2/scripting.md
diff --git a/_pages/plugins/trakem2/segmentation-modes-tutorial.md b/_pages/plugins/trakem2/segmentation-modes-tutorial.md
diff --git a/_pages/plugins/trakem2/semi-automatic-segmentation-tutorial.md b/_pages/plugins/trakem2/semi-automatic-segmentation-tutorial.md
diff --git a/_pages/plugins/trakem2/tplugin.md b/_pages/plugins/trakem2/tplugin.md
diff --git a/_pages/plugins/trakem2/tutorials.md b/_pages/plugins/trakem2/tutorials.md
diff --git a/_pages/plugins/tws/how-to-compare-classifiers.md b/_pages/plugins/tws/how-to-compare-classifiers.md
diff --git a/_pages/plugins/tws/how-to-install-new-classifiers.md b/_pages/plugins/tws/how-to-install-new-classifiers.md
diff --git a/_pages/plugins/tws/minimum-splits-and-mergers-warping-error.md b/_pages/plugins/tws/minimum-splits-and-mergers-warping-error.md
diff --git a/_pages/plugins/tws/rand-error.md b/_pages/plugins/tws/rand-error.md
diff --git a/_pages/plugins/tws/scripting.md b/_pages/plugins/tws/scripting.md
diff --git a/_pages/plugins/tws/topology-preserving-warping-error.md b/_pages/plugins/tws/topology-preserving-warping-error.md
