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This repository was archived by the owner on May 25, 2024. It is now read-only.
from nucleus.protos import reads_pb2
from nucleus.io import sam
read_requirements = reads_pb2.ReadRequirements()
sam_reader = sam.SamReader(
input_path="NA12878_sliced.bam", read_requirements=read_requirements)
for r in sam_reader:
print(r)
RuntimeError: PythonNext() argument read is not valid: Dynamic cast failed
2023-12-27 16:25:36.748166: W [.nucleus/util/proto_clif_converter.h:60)] Failed to cast type N6google8protobuf14DynamicMessageE