EXCEPTION: This dataset has no solid kmers

[shimingt]

Hello SchulzLab,

I tried to run ORNA, but came out with the following errors:

(tsm-py3) tanshiming@S620100019205:~/Documents/CaoBin/October-2018/trimmed_duk_kmer31$ ORNA -pair1 /home/tanshiming/Documents/CaoBin/October-2018/trimmed_duk_kmer31/MFC280618_S2_R1_001.fastq.gz -pair2 MFC280618_S2_R2_001.fastq.gz -kmer 31 -nb-cores 15 -verbose 1 -ksorting 1 -type fastq -output MFC280618.Normalized
Given Parameters
----------------
Base:	1.7
kmer size:	31
Mode: ORNA-K
Bin size:	1000
Number of cores:	15
----------------
[DSK: nb solid kmers found : 0           ]  100  %   elapsed:  37 min 58 sec   remaining:   0 min 0  sec   cpu: 351.8 %   mem: [1595, 1595, 1595] MB 
EXCEPTION: This dataset has no solid kmers

Could I check if something went wrong?

Thank you!

[ddurai]

Hi,
Can you please tell me the read length of the dataset