Default settings.yaml for 'settlement'

[AKissel]

Hello,

If I'm interpreting the text in the .Rmd file correctly, it appears the default for settings:settlement should be FALSE. However, when I run

cat(paste0(readLines('settings.yaml'), '\n'))

and then

source('R/setup_runs.R', echo=FALSE, verbose=FALSE)'

I get:

settings$settlement
[1] "data/input/expert_assessment.csv"

I've tried adding settings$settlement<-FALSE to setup_runs.R, but then I get the following error when trying to generate the Core Age and Depth Files:

Error in file.exists(settings$settlement) : invalid 'file' argument

Any insight as to how to change this so that the chronological controls are used as-is?

Thanks,
Amanda