diff --git a/flask_backend/models/BreastCancer_SVM_v1/BCO.json b/flask_backend/models/BreastCancer_SVM_v1/BCO.json new file mode 100644 index 00000000..11fbe9a7 --- /dev/null +++ b/flask_backend/models/BreastCancer_SVM_v1/BCO.json @@ -0,0 +1,199 @@ +{ + "object_id": "https://biocomputeobject.org/HIVE_000006/DRAFT", + "spec_version": "https://w3id.org/ieee/ieee-2791-schema/2791object.json", + "etag": "", + "provenance_domain": { + "name": "BreastCancer_SVM", + "version": "1.0", + "license": "https://spdx.org/licenses/CC-BY-4.0.html", + "created": "2025-12-15T19:01:57", + "modified": "2025-12-15T19:42:32", + "derived_from": "", + "contributors": [ + { + "name": "Vishal Bakshi", + "affiliation": "George Washington University", + "email": "vishal.bakshi@gwu.edu", + "contribution": [ + "createdBy" + ], + "orcid": "" + }, + { + "name": "Patrick McNeely", + "affiliation": "George Washington University", + "email": "pmcneely@email.gwu.edu", + "contribution": [ + "createdBy" + ], + "orcid": "" + }, + { + "name": "Lori Krammer", + "affiliation": "George Washington University", + "email": "lorikrammer@email.gwu.edu", + "contribution": [ + "createdBy" + ], + "orcid": "" + } + ], + "review": [] + }, + "usability_domain": [ + "This pipeline is intended to support biomedical researchers, data scientists, and clinical informaticians interested in: Extracting the response percentage of breast cancer patients to chemotherapy and combo therapy using a pre-trained SVM model." + ], + "description_domain": { + "keywords": [ + "python", + "machine learning", + "single-cell RNA-seq" + ], + "xref": [], + "platform": [ + "VS Code" + ], + "pipeline_steps": [ + { + "step_number": 1, + "name": "model inference", + "description": "Run inference on the new participant's single-cell RNA-seq data using a pre-trained SVM model.", + "version": "1.0", + "input_list": [ + { + "filename": "chemo_model.pkl", + "access_time": "2025-12-15T04:00:00.000Z", + "uri": "https://github.com/GW-HIVE/PredictMod/blob/main/flask_backend/models/BreastCancer_SVM_v1/chemo_model.pkl", + "sha1_checksum": "" + }, + { + "filename": "combo_model.pkl", + "access_time": "2025-12-15T04:00:00.000Z", + "uri": "https://github.com/GW-HIVE/PredictMod/blob/main/flask_backend/models/BreastCancer_SVM_v1/combo_model.pkl", + "sha1_checksum": "" + }, + { + "filename": "test_script.py", + "access_time": "2025-12-15T04:00:00.000Z", + "uri": "https://github.com/GW-HIVE/PredictMod/blob/main/flask_backend/models/BreastCancer_SVM_v1/test_script.py", + "sha1_checksum": "" + }, + { + "filename": "testset_P020.csv", + "access_time": "2025-12-15T04:00:00.000Z", + "uri": "https://github.com/GW-HIVE/PredictMod/blob/main/flask_backend/models/BreastCancer_SVM_v1/testset_P020.csv", + "sha1_checksum": "" + } + ], + "output_file": [ + { + "filename": "NA", + "access_time": "2025-12-15T04:00:00.000Z", + "uri": "NA", + "sha1_checksum": "" + } + ] + } + ] + }, + "parametric_domain": [], + "io_domain": { + "input_subdomain": [ + { + "uri": { + "filename": "chemo_model.pkl", + "uri": "https://github.com/GW-HIVE/PredictMod/blob/main/flask_backend/models/BreastCancer_SVM_v1/chemo_model.pkl", + "access_time": "2025-12-15T04:00:00.000Z" + } + }, + { + "uri": { + "filename": "combo_model.pkl", + "uri": "https://github.com/GW-HIVE/PredictMod/blob/main/flask_backend/models/BreastCancer_SVM_v1/combo_model.pkl", + "access_time": "2025-12-15T04:00:00.000Z" + } + }, + { + "uri": { + "filename": "test_script.py", + "uri": "https://github.com/GW-HIVE/PredictMod/blob/main/flask_backend/models/BreastCancer_SVM_v1/test_script.py", + "access_time": "2025-12-15T04:00:00.000Z" + } + }, + { + "uri": { + "filename": "testset_P020.csv", + "uri": "https://github.com/GW-HIVE/PredictMod/blob/main/flask_backend/models/BreastCancer_SVM_v1/testset_P020.csv", + "access_time": "2025-12-15T04:00:00.000Z" + } + }, + { + "uri": { + "filename": "testset_P025.csv", + "uri": "https://github.com/GW-HIVE/PredictMod/blob/main/flask_backend/models/BreastCancer_SVM_v1/testset_P025.csv", + "access_time": "2025-12-15T04:00:00.000Z" + } + } + ], + "output_subdomain": [ + { + "mediatype": "string", + "uri": { + "filename": "NA", + "uri": "NA", + "access_time": "2025-12-15T04:00:00.000Z" + } + } + ] + }, + "execution_domain": { + "script": [], + "script_driver": "", + "software_prerequisites": [ + { + "name": "Python", + "version": "3.11.13", + "uri": { + "filename": "", + "uri": "https://www.python.org/", + "access_time": "2025-12-15T04:00:00.000Z", + "sha1_checksum": "" + } + }, + { + "name": "pandas", + "version": "2.2.2", + "uri": { + "filename": "", + "uri": "https://pandas.pydata.org/", + "access_time": "2025-12-15T04:00:00.000Z", + "sha1_checksum": "" + } + }, + { + "name": "numpy", + "version": "2.0.2", + "uri": { + "filename": "", + "uri": "https://numpy.org/", + "access_time": "2025-12-15T04:00:00.000Z", + "sha1_checksum": "" + } + }, + { + "name": "scikit-learn", + "version": "2.4.2", + "uri": { + "filename": "", + "uri": "https://scikit-learn.org/", + "access_time": "2025-12-15T04:00:00.000Z", + "sha1_checksum": "" + } + } + ], + "external_data_endpoints": [], + "environment_variables": {} + }, + "extension_domain": [], + "error_domain": {} +} \ No newline at end of file diff --git a/flask_backend/models/BreastCancer_SVM_v1/README.md b/flask_backend/models/BreastCancer_SVM_v1/README.md new file mode 100644 index 00000000..c925ef73 --- /dev/null +++ b/flask_backend/models/BreastCancer_SVM_v1/README.md @@ -0,0 +1,118 @@ +# 🧬 Breast Cancer Treatment Response Prediction +### Single-Cell RNA-seq–based Machine Learning Pipeline + +--- + +## 📌 Project Overview + +Triple-Negative Breast Cancer (TNBC) patients typically receive either **Chemotherapy** or **Anti–PD-L1 + Chemotherapy**. However, only a subset of patients respond effectively to each treatment. + +This project builds **two machine learning models** using **pre-treatment single-cell RNA-seq data** to: + +- Predict response likelihood for **Chemotherapy** +- Predict response likelihood for **Anti–PD-L1 + Chemotherapy** +- Aggregate **cell-level predictions** into a **patient-level response estimate** + +The system is designed for **real-world inference**, where each patient may contribute **multiple single-cell observations**. + +--- + +## 🎯 Objective + +- Use **pre-treatment immune cell features** to predict treatment response +- Build **separate, treatment-specific models** +- Prevent **data leakage** by respecting patient-level grouping +- Provide a **deployable and interpretable inference pipeline** + +--- + +## 📊 Data Source + +**Primary Publication** +*Single-cell analyses reveal key immune cell subsets associated with response to PD-L1 blockade in triple-negative breast cancer* +**PMID:** 33589889 +**GEO Accession:** GSE169246 + +**Data Characteristics** +- Single-cell RNA sequencing (scRNA-seq) +- Pre-treatment immune cells +- Multiple cells per patient +- Cell-level annotations linked to patient response + +--- + +## 🧪 Dataset Structure + +Each row corresponds to **one immune cell**. + +| Column | Description | +|------|-------------| +| Expression | Aggregate gene expression score | +| nUMI | Total RNA molecules per cell | +| nGene | Number of detected genes | +| percent_mito | Mitochondrial gene fraction (cell stress) | +| percent_hsp | Heat shock protein expression | +| percent_ig | Immunoglobulin expression | +| percent_rp | Ribosomal protein expression | +| PDCD1 | PD-1 gene expression | +| Origin | Tissue source | +| Response | Clinical response label | +| Patient_code | Unique patient identifier | +| Timeline | Pre-treatment / Post-treatment | + +--- + +## 🧠 Modeling Strategy + +### Why two models? + +Different treatments were trained on **different tissue distributions**: + +- **Chemo model** + - `breast`, `liver` +- **Anti–PD-L1 + Chemo model** + - `chest_wall`, `liver`, `lymph_node` + +Training a single model would introduce **distribution shift**, so treatment-specific models are used. + +--- + +## 🤖 Models Used + +- **Support Vector Machine (SVM)** + - RBF kernel + - Class-weight balanced + - StandardScaler included in pipeline + +**Why SVM?** +- Suitable for small datasets +- Handles non-linear decision boundaries +- Stable under limited samples + +--- + +## 🔍 Prediction Logic + +1. User uploads a CSV containing **single-cell observations** +2. Data is filtered to **pre-treatment** rows +3. Tissue origin is **one-hot encoded** +4. Each model: + - Receives only the features it was trained on + - Produces **cell-level predictions** +5. Final response score: + + percentage = (Number of responder cells / Total number of cells) * 100 + +--- + +## Train the model + +`python chemo_model_training.py --input "path/to/your/data.csv"` + +`python combo_model_training.py --input "path/to/your/data.csv"` + +## Run the model + +`python test_script.py --input "path/to/your/testdata.csv" --model "chemo_model.pkl"` + +`python test_script.py --input "path/to/your/testdata.csv" --model "combo_model.pkl"` \ No newline at end of file diff --git a/flask_backend/models/BreastCancer_SVM_v1/chemo_model.pkl b/flask_backend/models/BreastCancer_SVM_v1/chemo_model.pkl new file mode 100644 index 00000000..d463dfb9 Binary files /dev/null and b/flask_backend/models/BreastCancer_SVM_v1/chemo_model.pkl differ diff --git a/flask_backend/models/BreastCancer_SVM_v1/chemo_model_training.py b/flask_backend/models/BreastCancer_SVM_v1/chemo_model_training.py new file mode 100644 index 00000000..14a152cd --- /dev/null +++ b/flask_backend/models/BreastCancer_SVM_v1/chemo_model_training.py @@ -0,0 +1,153 @@ + +# Breast Cancer Response Prediction (Post-treatment) Combinational Treatment +# This notebook trains a SVM Classifier to predict patient response based on post-treatment intervention data. + +import warnings +import pickle +import pandas as pd +import numpy as np +from sklearn.model_selection import KFold +from sklearn.pipeline import make_pipeline +from sklearn.preprocessing import StandardScaler +from sklearn.metrics import accuracy_score, roc_auc_score, confusion_matrix, classification_report +from sklearn.svm import SVC +from utils import remove_iqr_outliers +from sklearn.model_selection import cross_val_score, KFold +from sklearn.preprocessing import LabelEncoder, OneHotEncoder +from sklearn.model_selection import GroupShuffleSplit +from argparse import ArgumentParser + +warnings.filterwarnings("ignore") + +parser = ArgumentParser() +parser.add_argument("--input", type=str, required=True) +args = parser.parse_args() + +# Load Data +df = pd.read_csv(args.input) + +# Filter for Post_treatment +df_pre_chemo = df[(df['Timeline'] == 'Pre_treatment') & (df['Treatment'] == 'Chemo')].copy() +print(f"Original shape: {df.shape}, Pre-treatment shape: {df_pre_chemo.shape}") + +# Drop redundant/irrelevant columns +drop_cols = ['Tissue', 'Identifier', 'Timeline', 'defcls', 'Treatment'] +df_chemo = df_pre_chemo.drop(columns=drop_cols) + +# Encode categorical variables +le = LabelEncoder() +categorical_cols = ['Response'] + +label_mappings = {} +for col in categorical_cols: + df_chemo[col] = le.fit_transform(df_chemo[col]) + label_mappings[col] = dict(zip(le.classes_, le.transform(le.classes_))) + +#One Hot Encode Origin +categorical_cols = ['Origin'] +for col in categorical_cols: + encoder = OneHotEncoder(sparse_output=False) + encoded_array = encoder.fit_transform(df_chemo[[col]]) + encoded_df = pd.DataFrame(encoded_array, columns=encoder.get_feature_names_out([col])) + df_chemo = pd.concat([df_chemo.drop(columns=[col]).reset_index(drop=True), encoded_df], axis=1) + +#Outlier Removal + +feature_cols = ["Expression", "Origin_breast", "Origin_liver", "nGene", "percent_mito", "percent_hsp", "percent_ig", "percent_rp", "nUMI", "PDCD1"] +label_cols = ["Response"] +df_chemo_ = remove_iqr_outliers(df_chemo, feature_cols) + +#Model Training + +gss = GroupShuffleSplit(n_splits=1, test_size=0.3, random_state=42) + +# groups = your patient IDs +groups = df_chemo_["Patient_code"] + +train_idx, test_idx = next(gss.split(df_chemo_, df_chemo_["Response"], groups=groups)) + +train_df = df_chemo_.iloc[train_idx] +test_df = df_chemo_.iloc[test_idx] + +# ------------------------- +# Define Model +# ------------------------- +def build_model(): + return make_pipeline( + StandardScaler(), + SVC( + kernel="rbf", + C=15, + gamma=0.1, + class_weight="balanced", + probability=True, + random_state=42 + ) + ) + +X = train_df[feature_cols] +y = train_df[label_cols] + +kf = KFold(n_splits=3, shuffle=True, random_state=42) + +best_auc = -1 +best_model = None +fold_num = 1 +best_cm = None +# ------------------------- +# KFold CV Loop +# ------------------------- +for train_idx, val_idx in kf.split(X): + + print(f"\n==============================") + print(f" Fold {fold_num}") + print("==============================") + + model = build_model() + + X_tr, X_test = X.iloc[train_idx], X.iloc[val_idx] + y_tr, y_test = y.iloc[train_idx], y.iloc[val_idx] + + # Train + model.fit(X_tr, y_tr) + + # Predict + y_pred = model.predict(X_test) + y_prob = model.predict_proba(X_test)[:, 1] + + # Metrics + acc = accuracy_score(y_test, y_pred) + auc = roc_auc_score(y_test, y_prob) if len(np.unique(y_test)) > 1 else np.nan + cm = confusion_matrix(y_test, y_pred) + print(f"Accuracy: {acc:.4f}") + print(f"AUC-ROC: {auc:.4f}") + print("\nConfusion Matrix:\n", cm) + print("\nClassification Report:\n", classification_report(y_test, y_pred)) + + # ------------------------- + # SAVE BEST MODEL + # ------------------------- + if auc > best_auc: # <-- CHANGE TO acc > best_acc IF YOU WANT ACCURACY + best_auc = auc + best_model = model + best_cm = cm + print("🔥 New best model found and stored.") + + fold_num += 1 + +print("\n==============================") +print(" BEST MODEL FROM CV") +print("==============================") +print(f"Best AUC: {best_auc:.4f}") + +#Confusion Matrix + +print("\nConfusion Matrix:\n", best_cm) + +# ------------------------- +# SAVE BEST MODEL TO .pkl +# ------------------------- +with open("chemo_model.pkl", "wb") as f: + pickle.dump(best_model, f) + +print("\n✅ Chemo model saved") \ No newline at end of file diff --git a/flask_backend/models/BreastCancer_SVM_v1/combo_model.pkl b/flask_backend/models/BreastCancer_SVM_v1/combo_model.pkl new file mode 100644 index 00000000..c748ec6d Binary files /dev/null and b/flask_backend/models/BreastCancer_SVM_v1/combo_model.pkl differ diff --git a/flask_backend/models/BreastCancer_SVM_v1/combo_model_training.py b/flask_backend/models/BreastCancer_SVM_v1/combo_model_training.py new file mode 100644 index 00000000..44eb6323 --- /dev/null +++ b/flask_backend/models/BreastCancer_SVM_v1/combo_model_training.py @@ -0,0 +1,153 @@ + +# Breast Cancer Response Prediction (Post-treatment) combo +# This notebook trains a SVM Classifier to predict patient response based on post-treatment intervention data. + +import warnings +import pickle +import pandas as pd +import numpy as np +from sklearn.model_selection import KFold +from sklearn.pipeline import make_pipeline +from sklearn.preprocessing import StandardScaler +from sklearn.metrics import accuracy_score, roc_auc_score, confusion_matrix, classification_report +from sklearn.svm import SVC +from utils import remove_iqr_outliers +from sklearn.model_selection import cross_val_score, KFold +from sklearn.preprocessing import LabelEncoder, OneHotEncoder +from sklearn.model_selection import GroupShuffleSplit +from argparse import ArgumentParser + +warnings.filterwarnings("ignore") + +# Load Data +parser = ArgumentParser() +parser.add_argument("--input", type=str, required=True) +args = parser.parse_args() +df = pd.read_csv(args.input) + +# Filter for Post_treatment +df_pre_combo = df[(df['Timeline'] == 'Pre_treatment') & (df['Treatment'] == 'anti-PDL1+Chemo')].copy() +print(f"Original shape: {df.shape}, Pre-treatment shape: {df_pre_combo.shape}") + +# Drop redundant/irrelevant columns +drop_cols = ['Tissue', 'Identifier', 'Timeline', 'defcls', 'Treatment'] +df_combo = df_pre_combo.drop(columns=drop_cols) + +# Encode categorical variables +le = LabelEncoder() +categorical_cols = [ 'Response'] + +label_mappings = {} +for col in categorical_cols: + df_combo[col] = le.fit_transform(df_combo[col]) + label_mappings[col] = dict(zip(le.classes_, le.transform(le.classes_))) + +#One Hot Encode Origin +categorical_cols = ['Origin'] +for col in categorical_cols: + encoder = OneHotEncoder(sparse_output=False) + encoded_array = encoder.fit_transform(df_combo[[col]]) + encoded_df = pd.DataFrame(encoded_array, columns=encoder.get_feature_names_out([col])) + df_combo = pd.concat([df_combo.drop(columns=[col]).reset_index(drop=True), encoded_df], axis=1) + +#Outlier Removal + +feature_cols = ["Expression", 'Origin_chest_wall', 'Origin_liver', + 'Origin_lymph_node', "nGene", "percent_mito", "percent_hsp", "percent_ig", "percent_rp", "nUMI", "PDCD1"] +label_cols = ["Response"] +df_combo_ = remove_iqr_outliers(df_combo, feature_cols) + +#Model Training + +gss = GroupShuffleSplit(n_splits=1, test_size=0.3, random_state=42) + +# groups = your patient IDs +groups = df_combo_["Patient_code"] + +train_idx, test_idx = next(gss.split(df_combo_, df_combo_["Response"], groups=groups)) + +train_df = df_combo_.iloc[train_idx] +test_df = df_combo_.iloc[test_idx] + +# ------------------------- +# Define Model +# ------------------------- +def build_model(): + return make_pipeline( + StandardScaler(), + SVC( + kernel="rbf", + C=15, + gamma=0.1, + class_weight="balanced", + probability=True, + random_state=42 + ) + ) + +X = train_df[feature_cols] +y = train_df[label_cols] + +kf = KFold(n_splits=3, shuffle=True, random_state=42) + +best_auc = -1 +best_model = None +fold_num = 1 +best_cm = None +# ------------------------- +# KFold CV Loop +# ------------------------- +for train_idx, val_idx in kf.split(X): + + print(f"\n==============================") + print(f" Fold {fold_num}") + print("==============================") + + model = build_model() + + X_tr, X_test = X.iloc[train_idx], X.iloc[val_idx] + y_tr, y_test = y.iloc[train_idx], y.iloc[val_idx] + + # Train + model.fit(X_tr, y_tr) + + # Predict + y_pred = model.predict(X_test) + y_prob = model.predict_proba(X_test)[:, 1] + + # Metrics + acc = accuracy_score(y_test, y_pred) + auc = roc_auc_score(y_test, y_prob) if len(np.unique(y_test)) > 1 else np.nan + cm = confusion_matrix(y_test, y_pred) + print(f"Accuracy: {acc:.4f}") + print(f"AUC-ROC: {auc:.4f}") + print("\nConfusion Matrix:\n", cm) + print("\nClassification Report:\n", classification_report(y_test, y_pred)) + + # ------------------------- + # SAVE BEST MODEL + # ------------------------- + if auc > best_auc: # <-- CHANGE TO acc > best_acc IF YOU WANT ACCURACY + best_auc = auc + best_model = model + best_cm = cm + print("🔥 New best model found and stored.") + + fold_num += 1 + +print("\n==============================") +print(" BEST MODEL FROM CV") +print("==============================") +print(f"Best AUC: {best_auc:.4f}") + +#Confusion Matrix + +print("\nConfusion Matrix:\n", best_cm) + +# ------------------------- +# SAVE BEST MODEL TO .pkl +# ------------------------- +with open("combo_model.pkl", "wb") as f: + pickle.dump(best_model, f) + +print("\n✅ combo model saved") \ No newline at end of file diff --git a/flask_backend/models/BreastCancer_SVM_v1/final_dataset.csv b/flask_backend/models/BreastCancer_SVM_v1/final_dataset.csv new file mode 100644 index 00000000..e695c1c3 --- /dev/null +++ b/flask_backend/models/BreastCancer_SVM_v1/final_dataset.csv @@ -0,0 +1,1501 @@ +Identifier,Expression,group,Tissue,Origin,Response,Timeline,Treatment,batch,nGene,percent_mito,percent_hsp,percent_ig,percent_rp,nUMI,myleiden,defcls,PDCD1,Patient_code +CTTGGCTAGAGAGCTC.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,1245,0.027518304,0.001262308,0.000252462,0.43877807,3961,1,T1,0.0,P017 +TTGCGTCAGTTTAGGA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,683,0.065461345,0.020573566,0.0,0.31359103,1604,2,T2,0.0,P001 +TTCTACAAGTATCTCG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1473,0.049619395,0.004510854,0.000281928,0.25740063,3547,8,T8,0.0,P013 +CATGACACATTGCGGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,921,0.036073536,0.009712106,0.00381547,0.41727367,2883,2,T2,0.0,P019 +CCAGCGAAGGAATCGC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1281,0.026019081,0.020815264,0.0,0.15351258,2306,11,T11,0.0,P013 +ACCGTAACAGCTCCGA.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,959,0.017348204,0.007021892,0.0,0.29739776,2421,8,T8,0.0,P016 +TTTACTGTCCTGTAGA.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,861,0.015203531,0.008827857,0.0,0.27072093,2039,2,T2,0.0,P005 +GCACATAGTGCTGTAT.01_YSS020_T_5,2.073070752,1,T,breast,R,Pre_treatment,Chemo,1,1543,0.02835298,0.01943294,0.000318573,0.1557821,3139,3,T3,2.073070752,P020 +AATCGGTAGGTTCCTA.01_XLJ019_T_5,0.962440724,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1217,0.056358807,0.015638832,0.003540868,0.3086456,3389,1,T1,0.962440724,P019 +TTTGCGCGTAAAGGAG.01_YSS020_T_5,1.500021646,1,T,breast,R,Pre_treatment,Chemo,1,1427,0.026686434,0.02779837,0.000370645,0.15567087,2698,3,T3,1.500021646,P020 +CTACACCCATCGGACC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1155,0.034995977,0.023330651,0.000402253,0.16251005,2486,0,T0,0.0,P020 +CGGACGTAGATCTGCT.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1469,0.046893045,0.006006006,0.0,0.2963733,4329,8,T8,0.0,P005 +GCGCGATAGGGATACC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,743,0.028992176,0.015186379,0.0,0.39300507,2173,2,T2,0.0,P001 +CGACTTCGTTCGGGCT.01_YSS020_T_5,2.579119285,1,T,breast,R,Pre_treatment,Chemo,1,1100,0.01830986,0.019248826,0.0,0.18544601,2130,3,T3,2.579119285,P020 +GTATTCTCAGGGATTG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,731,0.051413883,0.00874036,0.0,0.4169666,1945,1,T1,0.0,P012 +CCTAAAGCAGAGCCAA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1198,0.04395177,0.01672501,0.000777907,0.20108907,2571,3,T3,0.0,P020 +TCAGGTAAGTCCAGGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,999,0.031793345,0.020864382,0.001490313,0.1987084,2013,3,T3,0.0,P020 +TGAAAGATCTGGTATG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,500,0.021315193,0.000453515,0.6507937,0.07936508,2205,1,T1,0.0,P019 +TGTATTCAGGCTCATT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,641,0.03538283,0.033062644,0.0,0.37354988,1724,2,T2,0.0,P001 +TCAGGTAGTAAAGGAG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,785,0.04363002,0.015125073,0.002908668,0.28912157,1719,0,T0,0.0,P019 +TTTGTCATCATGTAGC.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1347,0.06319501,0.010577706,0.0,0.29861677,3687,2,T2,0.0,P004 +TGGACGCAGCGCCTCA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1213,0.049099836,0.031423897,0.001636661,0.18036006,3055,2,T2,0.0,P022 +TTAGGCATCTTGCAAG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1252,0.016211942,0.02846975,0.00118624,0.12574139,2529,3,T3,0.0,P002 +CCGGTAGAGCTCCCAG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,429,0.047540985,0.027868852,0.029508196,0.17213115,610,4,T4,0.0,P025 +CGAACATCAGCCAGAA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,824,0.072135784,0.010372466,0.0,0.36256483,2121,1,T1,0.0,P001 +GACTACACAAGACGTG.02_WYP025_T_5,0.871290604,2,T,breast,NR,Post_treatment,Chemo,1,2452,0.023857936,0.027653517,0.000271113,0.12755863,7377,5,T5,0.871290604,P025 +AGATTGCGTACTTGAC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,3248,0.019988578,0.031753283,0.001827527,0.13203883,8755,4,T4,0.0,P025 +AGTGAGGGTGTTCGAT.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1740,0.06641098,0.012313282,0.000201857,0.2775535,4954,6,T6,0.0,P004 +CGTAGCGAGGGCACTA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1186,0.045262754,0.030303031,0.0,0.17836593,2607,6,T6,0.0,P019 +GTAACTGGTACCATCA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,755,0.01635514,0.001752336,0.001168224,0.40595794,1712,4,T4,0.0,P012 +CTCAGAATCAGCAACT.01_XCY022_T_5,2.905765469,1,T,breast,R,Pre_treatment,Chemo,1,1122,0.051174495,0.014261745,0.002097315,0.18540269,2384,3,T3,2.905765469,P022 +GCGGGTTCACACATGT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,806,0.049062844,0.020396912,0.000551268,0.23098126,1814,3,T3,0.0,P012 +GGACAAGGTAGCGTAG.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1651,0.05304102,0.014615747,0.0,0.20320603,4242,6,T6,0.0,P016 +ACACTGAAGTTAACGA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,993,0.04380342,0.007478633,0.000534188,0.27510685,1872,4,T4,0.0,P019 +GTTTCTACAGTAACGG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,852,0.047784533,0.029539531,0.0,0.2932233,2302,2,T2,0.0,P012 +GGCGACTAGTAAGTAC.01_HFR012_T_5,1.596942327,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,643,0.0794702,0.008514664,0.000946074,0.119205296,1057,1,T1,1.596942327,P012 +CCGGTAGCAATAGCGG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,759,0.045801528,0.03307888,0.001272265,0.22073792,1572,3,T3,0.0,P019 +GAGGTGAGTTGATTGC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1380,0.02157032,0.043428242,0.001438021,0.21886684,3477,0,T0,0.0,P025 +GGAATAAAGGACGAAA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1287,0.052883178,0.011951001,0.002091425,0.27786076,3347,6,T6,0.0,P022 +ACTATCTGTCCAGTTA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1909,0.025054203,0.033004094,0.000481812,0.115393884,4151,5,T5,0.0,P002 +AGCGTATAGTACCGGA.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,448,0.0295858,0.043786984,0.002366864,0.2781065,845,0,T0,0.0,P018 +AAGGTTCGTCGGCACT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1192,0.037495814,0.015065283,0.001004352,0.30733177,2987,6,T6,0.0,P025 +CTTTGCGGTAGGCTGA.02_WYP025_T_5,0.913211249,2,T,breast,NR,Post_treatment,Chemo,1,1542,0.037293106,0.006075843,0.000628536,0.3555416,4773,1,T1,0.913211249,P025 +TGACTTTTCCAGTAGT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1691,0.037789773,0.03969514,0.001270245,0.064147346,3149,3,T3,0.0,P022 +TCGCGTTTCCGTTGCT.01_YSS020_T_5,2.666989274,1,T,breast,R,Pre_treatment,Chemo,1,988,0.016016016,0.004004004,0.0,0.15315315,1998,5,T5,2.666989274,P020 +CGAATGTGTACAGTGG.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,767,0.06313993,0.004550626,0.0,0.35608646,1758,1,T1,0.0,P023 +CCCTCCTGTTGTCTTT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1060,0.017094018,0.0482906,0.00042735,0.21666667,2340,6,T6,0.0,P013 +GCGAGAAAGTACCGGA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,558,0.03517588,0.018090453,0.0,0.28643215,995,1,T1,0.0,P007 +CAAGATCCATGACATC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1095,0.06283229,0.03479942,0.004833253,0.06718221,2069,3,T3,0.0,P022 +GCATACATCAACCATG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1056,0.09345327,0.016491754,0.00149925,0.15692154,2001,12,T12,0.0,P002 +TGCACCTGTCCGTTAA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1068,0.031113876,0.013067829,0.002177971,0.39794648,3214,1,T1,0.0,P022 +GATGAGGAGAATGTTG.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1208,0.05205852,0.008506294,0.0,0.2477033,2939,0,T0,0.0,P023 +CTCTGGTTCATGTCTT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1390,0.04636168,0.020264046,0.003991403,0.24930918,3257,0,T0,0.0,P022 +TGGGAAGGTCCGTCAG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1566,0.047641847,0.015800813,0.000718219,0.18170936,4177,11,T11,0.0,P002 +TACTTACTCTCATTCA.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1272,0.033322114,0.003702457,0.0,0.2460451,2971,0,T0,0.0,P023 +CGTCACTTCATTTGGG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,925,0.027435808,0.008793528,0.00316567,0.4474147,2843,1,T1,0.0,P019 +CTGAAGTGTCGGCATC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,830,0.029569892,0.006048387,0.003360215,0.14112903,1488,5,T5,0.0,P019 +TCAGCTCAGGTGTTAA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,879,0.031077694,0.067669176,0.0,0.24411027,1995,2,T2,0.0,P001 +GGTGAAGTCTTTAGTC.02_LCL002_T_5,0.800656213,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,2198,0.023431994,0.013389711,0.000352361,0.21670191,5676,5,T5,0.800656213,P002 +AACTCAGGTGATGTGG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,851,0.020460358,0.006393862,0.000639386,0.23657289,1564,3,T3,0.0,P020 +CCCATACTCAGTCAGT.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,406,0.0352,0.0224,0.0,0.2048,625,0,T0,0.0,P004 +GGTGAAGGTTACGACT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,792,0.055623222,0.008120178,0.001624036,0.45269996,2463,1,T1,0.0,P019 +ACGGCCACAGGGCATA.02_WYP025_T_5,1.007307236,2,T,breast,NR,Post_treatment,Chemo,1,1540,0.034590438,0.009848666,0.001441268,0.25798702,4163,6,T6,1.007307236,P025 +CACAGGCCAAGCTGAG.02_XCY022_T_5,1.499240317,2,T,breast,R,Post_treatment,Chemo,1,1446,0.021659175,0.006129955,0.006538619,0.060890887,2447,4,T4,1.499240317,P022 +AATCCAGCACAGACAG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,913,0.020854527,0.030010173,0.002034588,0.19786368,1966,0,T0,0.0,P018 +CGCGGTAGTAGAGTGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1104,0.0394492,0.012281355,0.001488649,0.2690733,2687,6,T6,0.0,P019 +CTGGTCTAGCGTCAAG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1426,0.04809494,0.00843223,0.000312305,0.19113055,3202,3,T3,0.0,P019 +TGGTTAGTCTTACCGC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,897,0.034520548,0.019726027,0.00109589,0.2290411,1825,6,T6,0.0,P020 +TAAGCGTAGTAGCCGA.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1002,0.041666668,0.033253204,0.000400641,0.27964744,2496,5,T5,0.0,P004 +CTAGTGACAATAGCGG.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,534,0.05804111,0.006045949,0.00483676,0.13301088,827,1,T1,0.0,P012 +GGGTCTGCATGGGAAC.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1484,0.021925643,0.006037496,0.0,0.1337782,3147,5,T5,0.0,P016 +TCACAAGAGGATTCGG.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,856,0.036073826,0.021392617,0.0,0.41317114,2384,1,T1,0.0,P001 +TTTGCGCGTCCAGTAT.02_LCL002_T_5,1.645217646,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1742,0.026832774,0.010781026,0.000718735,0.16530906,4174,3,T3,1.645217646,P002 +ACGGCCAAGGATATAC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1585,0.026152601,0.039094094,0.001348072,0.13291992,3709,3,T3,0.0,P019 +GGTGAAGAGCAATCTC.01_XLJ019_T_5,1.551865257,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,761,0.01667258,0.012061015,0.001418943,0.10109968,2819,3,T3,1.551865257,P019 +CAAGGCCGTAAGCACG.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1510,0.06532093,0.00748469,0.0,0.29689273,4409,2,T2,0.0,P004 +AAGGCAGTCACCTTAT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,937,0.05685193,0.034789987,0.0,0.25880358,2357,11,T11,0.0,P013 +GATCGCGCATGCCCGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,505,0.055813953,0.019534884,0.004651163,0.31069767,1075,2,T2,0.0,P019 +TACTCATGTGTGAATA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,492,0.078282826,0.002525253,0.001262626,0.1919192,792,3,T3,0.0,P019 +ATCCGAACAATTCCTT.02_HFR012_T_5,1.129263019,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1080,0.059898045,0.024638912,0.0,0.19583687,2354,3,T3,1.129263019,P012 +ACTATCTCACAACGCC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1077,0.021012416,0.020057306,0.0,0.12368672,2094,0,T0,0.0,P013 +GTGTTAGAGGTCGGAT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,535,0.013605442,0.022675738,0.000755858,0.43235072,1323,1,T1,0.0,P012 +CATATTCGTAGCACGA.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1444,0.015014164,0.007082153,0.0,0.23626062,3530,2,T2,0.0,P005 +TCAATCTCAGGTCCAC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,762,0.08743169,0.003642987,0.0,0.31633273,1647,11,T11,0.0,P005 +AGCAGCCCAGTATCTG.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,948,0.053719006,0.011806375,0.0,0.17827627,1694,0,T0,0.0,P004 +CATCAGAAGGCGTACA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1742,0.05137065,0.010366275,0.000230362,0.2914075,4341,4,T4,0.0,P019 +GTCTTCGTCCGCAGTG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,834,0.0623608,0.020601336,0.0,0.26169264,1796,1,T1,0.0,P023 +TGCCCATTCCCTAATT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,754,0.03829253,0.023854364,0.0,0.2435656,1593,2,T2,0.0,P001 +TTCGAAGTCATTGCCC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1337,0.031632654,0.033928573,0.0,0.27857143,3920,0,T0,0.0,P023 +GTTCTCGCACTGTTAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1075,0.03180354,0.01489533,0.005233495,0.28542674,2484,7,T7,0.0,P025 +AGAGCTTCATCGGTTA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1065,0.05314197,0.004654771,0.00155159,0.31885183,2578,0,T0,0.0,P022 +TTCTCCTCAATAAGCA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,503,0.031839624,0.0625,0.0,0.14622642,848,6,T6,0.0,P018 +CTTCTCTAGCCCTAAT.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1288,0.033477634,0.035786435,0.0,0.2851371,3465,1,T1,0.0,P013 +TCATTACAGTGTCCAT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,712,0.03741746,0.009537784,0.0,0.29200295,1363,0,T0,0.0,P012 +CCTACACCATCGATTG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1072,0.025618758,0.028658273,0.001302649,0.24793747,2303,0,T0,0.0,P018 +CTCTACGGTATGCTTG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,560,0.09146342,0.00304878,0.00101626,0.25101626,984,4,T4,0.0,P013 +GTCGGGTTCTACCAGA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,505,0.02993348,0.005543237,0.0,0.34478936,902,1,T1,0.0,P007 +GTCTCGTTCATAAAGG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1214,0.0232378,0.042602632,0.001936483,0.22656855,2582,0,T0,0.0,P019 +TGCGGGTAGAGTACCG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1417,0.025504151,0.011862396,0.00029656,0.27698696,3372,3,T3,0.0,P020 +CCTAAAGGTGTGAATA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,2713,0.037554488,0.018218398,0.0,0.20833799,8947,5,T5,0.0,P013 +GTGCTTCAGCCAGAAC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,908,0.05862362,0.021240441,0.0,0.31605777,2354,7,T7,0.0,P012 +ATCATGGCACCAACCG.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,468,0.01923077,0.030364372,0.0,0.37651822,988,2,T2,0.0,P018 +CTTACCGGTCGCGGTT.01_WYP025_T_5,1.061751123,1,T,breast,NR,Pre_treatment,Chemo,1,2588,0.017264726,0.029451592,0.005247123,0.11323629,5908,4,T4,1.061751123,P025 +AGGGTGACAAGAGTCG.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,1243,0.03476005,0.0230869,0.0,0.32840466,3855,1,T1,0.0,P001 +AGAATAGTCGAGAACG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,553,0.039229672,0.009272468,0.000713267,0.414408,1402,1,T1,0.0,P012 +TATGCCCTCGCACTCT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,739,0.03431764,0.016759777,0.0,0.2585794,1253,7,T7,0.0,P007 +GGCGTGTTCACAGGCC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,410,0.05141658,0.003147954,0.007345226,0.40818468,953,5,T5,0.0,P022 +TTTGCGCCACCTGGTG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1384,0.044926412,0.01859024,0.000387297,0.13555384,2582,4,T4,0.0,P018 +TACTCGCAGTCCCACG.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,482,0.08565072,0.031145718,0.001112347,0.23692992,899,6,T6,0.0,P018 +TGGGAAGAGAGTTGGC.03_LBH013_T_5,1.307653337,3,T,liver,R,Progression,Chemo,1,1669,0.015059509,0.029390333,0.0,0.12144765,4117,5,T5,1.307653337,P013 +TATCAGGTCTTCAACT.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1260,0.0570908,0.020649863,0.0,0.2805952,3293,8,T8,0.0,P013 +ACATGGTGTATAGTAG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1582,0.0625309,0.012110727,0.0,0.25160652,4046,8,T8,0.0,P005 +CCAATCCCATCCGCGA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1977,0.013437248,0.02768073,0.00053749,0.10561677,3721,3,T3,0.0,P018 +TATTACCTCGTTTATC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,413,0.01305483,0.006527415,0.002610966,0.2767624,766,5,T5,0.0,P025 +ACACCAAAGGTGCTTT.01_ZJ005_T_5,1.101180534,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1502,0.035992954,0.006292474,0.0,0.25371256,3973,0,T0,1.101180534,P005 +TGAAAGACATCACGTA.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,2059,0.09062602,0.003605375,0.0,0.29056048,6102,1,T1,0.0,P004 +CTGAAACTCGAATGCT.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,944,0.097665556,0.020962363,0.0,0.1977132,2099,8,T8,0.0,P005 +ACGCCGATCTACCTGC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1580,0.06719761,0.005226481,0.0,0.2058238,4018,11,T11,0.0,P005 +GAAGCAGCAAATCCGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1621,0.03647587,0.020482603,0.00701459,0.22025813,3564,4,T4,0.0,P025 +ACATCAGTCACAGTAC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1109,0.06150889,0.01585776,0.000961076,0.18596828,2081,1,T1,0.0,P019 +TCAACGATCTGAGGGA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,919,0.04099906,0.01602262,0.0,0.24787936,2122,6,T6,0.0,P012 +GGTGAAGCAGGCAGTA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1411,0.024504693,0.011991658,0.000260688,0.27267987,3836,0,T0,0.0,P025 +CGAGAAGCAATCTGCA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1157,0.04771372,0.02833002,0.001988072,0.11232604,2012,4,T4,0.0,P022 +GGAACTTAGCAAATCA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1125,0.052894924,0.018227305,0.0,0.22694781,2798,5,T5,0.0,P012 +CGTTCTGGTATAATGG.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,655,0.025,0.029310346,0.000862069,0.18879311,1160,6,T6,0.0,P018 +TCGTACCGTCCGAAGA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1499,0.029794376,0.02370961,0.0,0.35984054,4766,2,T2,0.0,P023 +AAAGATGTCTGTACGA.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,964,0.045488164,0.001849113,0.0,0.40236688,2704,1,T1,0.0,P023 +GATTCAGGTTCCACTC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1068,0.03638368,0.008452775,0.000367512,0.2800441,2721,2,T2,0.0,P012 +GCTTCCAAGGTAGCCA.01_XCY022_T_5,0.993225404,1,T,breast,R,Pre_treatment,Chemo,1,1493,0.03590786,0.030487806,0.003726287,0.18462059,2952,7,T7,0.993225404,P022 +TGACTAGAGTCAAGGC.02_CLR001_T_5,2.692543838,2,T,chest_wall,NR,Post_treatment,Chemo,1,732,0.030257186,0.007564297,0.0,0.35854766,1983,6,T6,2.692543838,P001 +CGCCAAGTCCCAAGAT.01_YSS020_T_5,1.464769241,1,T,breast,R,Pre_treatment,Chemo,1,1490,0.029973553,0.02145166,0.00176315,0.18424919,3403,3,T3,1.464769241,P020 +CAGCCGAGTACAGTGG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,966,0.0707113,0.015481171,0.00209205,0.3292887,2390,1,T1,0.0,P018 +GTCAAGTCACGGATAG.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,1215,0.06780195,0.001892148,0.0,0.24850205,3171,11,T11,0.0,P017 +AGAGCGAAGAGGGATA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,651,0.026385223,0.005936675,0.0,0.40039578,1516,1,T1,0.0,P001 +CAGCAGCGTTAGAACA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1348,0.07439199,0.003147353,0.000858369,0.29356223,3495,8,T8,0.0,P013 +TGAGAGGTCAGTTCGA.02_LLY018_T_5,2.424764956,2,T,breast,NR,Post_treatment,Chemo,1,1760,0.020969603,0.0704117,0.001539054,0.1481339,5198,5,T5,2.424764956,P018 +CGCTTCACAGGCAGTA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1337,0.05814327,0.018631546,0.000642467,0.23064569,3113,6,T6,0.0,P019 +CAGCTGGCAAAGCAAT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1567,0.02564895,0.042336218,0.00092707,0.15327565,3236,5,T5,0.0,P025 +GTTTCTATCTCTGCTG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1969,0.018154688,0.021387715,0.000994777,0.14598359,4021,4,T4,0.0,P018 +ACGCAGCGTAGCGCAA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2248,0.03423733,0.020370597,0.001472573,0.34102345,8149,1,T1,0.0,P025 +CGAGCCAGTAAGGGCT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1002,0.03928347,0.004399749,0.000314268,0.39817724,3182,1,T1,0.0,P019 +CAAGGCCAGCGCTTAT.03_LBH013_T_5,0.443138509,3,T,liver,R,Progression,Chemo,1,4150,0.036521062,0.021313203,0.0,0.17361382,18017,8,T8,0.443138509,P013 +ATTTCTGGTCGGCTCA.01_YSS020_T_5,1.836199893,1,T,breast,R,Pre_treatment,Chemo,1,1837,0.043323018,0.008093311,0.001428231,0.16829327,4201,3,T3,1.836199893,P020 +GGGCATCTCTGGTATG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1059,0.011930586,0.01626898,0.000542299,0.14154013,1844,3,T3,0.0,P020 +ACCTTTATCGTTACGA.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1328,0.050151464,0.041063614,0.0,0.18815213,2971,5,T5,0.0,P016 +AGCGTATTCTCTTATG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,506,0.017038008,0.010484928,0.001310616,0.16906947,763,7,T7,0.0,P019 +ATGTGTGTCATACGGT.01_YSS020_T_5,2.123017557,1,T,breast,R,Pre_treatment,Chemo,1,2647,0.09892971,0.019236332,0.000578536,0.112814575,6914,7,T7,2.123017557,P020 +GAAATGAGTTGTGGCC.02_YSS020_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,609,0.038607117,0.003785011,0.0,0.34973505,1321,6,T6,0.0,P020 +CGGACACTCATGTGGT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,951,0.061177816,0.044596914,0.001143511,0.09319611,1749,4,T4,0.0,P002 +TGAGGGACAGATCTGT.01_XCY022_T_5,1.283362258,1,T,breast,R,Pre_treatment,Chemo,1,1148,0.04707327,0.019647975,0.008186656,0.21326238,2443,0,T0,1.283362258,P022 +CAAGATCGTCGCGGTT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,502,0.057264958,0.06923077,0.003418803,0.2735043,1170,1,T1,0.0,P019 +CGGAGTCTCATGCAAC.02_LCL002_T_5,1.067870328,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1724,0.03860465,0.029767442,0.001162791,0.17279069,4300,6,T6,1.067870328,P002 +ATCCGAAAGCGTCAAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,861,0.07472385,0.003898636,0.003248863,0.22547108,1539,5,T5,0.0,P025 +ATCTGCCCATCGGTTA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1362,0.032720752,0.037203047,0.000224115,0.28933215,4462,12,T12,0.0,P023 +AATCCAGTCACCGGGT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1213,0.026524391,0.013719512,0.00152439,0.3054878,3280,5,T5,0.0,P025 +CTTACCGAGCCGGTAA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,802,0.041899443,0.028631285,0.002094972,0.11173184,1432,0,T0,0.0,P018 +GAGTCCGAGTGGTCCC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,679,0.0472973,0.00975976,0.0,0.22597598,1332,3,T3,0.0,P012 +TACAGTGCATGACGGA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1825,0.014636841,0.009665838,0.002209334,0.14995858,3621,6,T6,0.0,P022 +TACCTTACAGTGGGAT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,1017,0.04295813,0.017944535,0.0,0.14627515,1839,1,T1,0.0,P001 +CGTTGGGGTTCGGCAC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,647,0.05090206,0.018041236,0.0,0.31378865,1552,2,T2,0.0,P001 +CTACACCCACACTGCG.02_YSS020_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1014,0.050036523,0.008400292,0.0,0.29620162,2738,0,T0,0.0,P020 +CGAGCCATCTCCGGTT.01_XLJ019_T_5,2.182309006,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,486,0.049092848,0.039487727,0.005336179,0.17075774,937,0,T0,2.182309006,P019 +ATGCGATAGGAGCGTT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,2237,0.044818304,0.016554508,0.0,0.22812921,7430,15,T15,0.0,P013 +GCATGCGGTCCGACGT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1937,0.057927404,0.015422231,0.00188076,0.23396653,5317,6,T6,0.0,P002 +CATGACAAGCAGACTG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1114,0.07295976,0.016923655,0.010530274,0.25084618,2659,6,T6,0.0,P025 +CTGTTTAGTACCAGTT.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,958,0.004548901,0.003032601,0.00075815,0.055344958,1319,4,T4,0.0,P019 +AAATGCCCAGCCAGAA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,538,0.018288223,0.005852231,0.0,0.4732992,1367,1,T1,0.0,P007 +TGACTTTGTACCGTAT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,745,0.07073955,0.028135048,0.004823151,0.12138264,1244,0,T0,0.0,P019 +GTAGTCACAGGAATCG.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1509,0.01728763,0.028912071,0.0,0.18837556,3355,0,T0,0.0,P013 +ATAAGAGAGGGTGTTG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,882,0.03577882,0.003975424,0.002168414,0.45861945,2767,1,T1,0.0,P019 +AGCCTAAAGCATCATC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1180,0.037357878,0.008933405,0.0,0.400379,3694,1,T1,0.0,P012 +AACTGGTGTAGCGTCC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1135,0.025723472,0.017914562,0.001378043,0.15801562,2177,3,T3,0.0,P022 +CCATGTCAGTTCGCAT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,594,0.049868766,0.005249344,0.0,0.22922134,1143,0,T0,0.0,P012 +CATATGGAGGGTCTCC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,617,0.062311556,0.017085427,0.004020101,0.021105528,995,11,T11,0.0,P020 +CACAAACCAATAGCAA.03_LBH013_T_5,1.791268664,3,T,liver,R,Progression,Chemo,1,1231,0.034640275,0.029691663,0.0,0.19375713,2627,0,T0,1.791268664,P013 +AGAGTGGAGTCCATAC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,535,0.056363635,0.003636364,0.0,0.34454545,1100,6,T6,0.0,P005 +CGGTTAAGTCTTCGTC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1671,0.042697065,0.009853168,0.000386399,0.32843894,5176,2,T2,0.0,P019 +TACTCGCTCGTTACGA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,529,0.060756974,0.04183267,0.0,0.28585657,1004,1,T1,0.0,P001 +CTAGAGTTCAGCCTAA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,404,0.05781866,0.013140605,0.002628121,0.15505913,761,5,T5,0.0,P019 +ACCAGTAAGCGGATCA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,901,0.023341201,0.013375295,0.000524521,0.15394703,3813,0,T0,0.0,P019 +AGAGCTTAGTGTCTCA.01_HLH023_T_5,3.509892415,1,T,breast,NR,Pre_treatment,Chemo,1,925,0.03835091,0.010546501,0.0,0.2396932,2086,0,T0,3.509892415,P023 +TGTGTTTGTAAATACG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,728,0.03314917,0.006906077,0.0,0.46593,2172,1,T1,0.0,P007 +CTCTAATTCCTGCCAT.01_XCY022_T_5,1.511811586,1,T,breast,R,Pre_treatment,Chemo,1,969,0.04261954,0.010914761,0.001039501,0.19282745,1924,0,T0,1.511811586,P022 +GGGCATCTCACGCATA.02_LCL002_T_5,1.375797394,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1204,0.01594533,0.053302962,0.000911162,0.041002277,2195,5,T5,1.375797394,P002 +GGGTCTGGTAATCACC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1633,0.033169888,0.006201327,0.000144217,0.41592154,6934,12,T12,0.0,P023 +TACAGTGCAGCCTTTC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,636,0.051441934,0.003897116,0.0,0.3016368,1283,2,T2,0.0,P001 +AGTGGGAAGTCTCAAC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1518,0.02672956,0.010781671,0.0,0.3281671,4452,8,T8,0.0,P013 +GTCGTAAAGTGGGATC.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,652,0.049039435,0.001516684,0.002022245,0.5166835,1978,1,T1,0.0,P018 +GTCGGGTGTGGCAAAC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,851,0.027777778,0.031517096,0.000534188,0.28418803,1872,2,T2,0.0,P012 +ATGCGATCAAGGTTCT.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,749,0.05922432,0.039308175,0.000524109,0.2604822,1908,0,T0,0.0,P016 +AAAGTAGAGCGCCTTG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,911,0.036044363,0.014325324,0.002310536,0.35027727,2164,1,T1,0.0,P025 +CCCTCCTCAACCGCCA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,645,0.021276595,0.002875216,0.0,0.49971247,1739,1,T1,0.0,P007 +CATCAGACATCCAACA.01_XCY022_T_5,1.193199815,1,T,breast,R,Pre_treatment,Chemo,1,1191,0.07350475,0.007825601,0.004471772,0.3608161,3578,6,T6,1.193199815,P022 +CAGCAGCGTAAGTTCC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1135,0.055230126,0.019246861,0.019665271,0.17573221,2390,3,T3,0.0,P019 +TGGCTGGTCCCAAGTA.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1651,0.047637794,0.005905512,0.00019685,0.2610236,5080,8,T8,0.0,P005 +TTCTTAGCAAAGTCAA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,883,0.025737602,0.001255493,0.00878845,0.22410546,1593,7,T7,0.0,P022 +ACGCAGCCAAGTTCTG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1017,0.042424243,0.008417509,0.0,0.34107745,2970,8,T8,0.0,P013 +TCGGGACGTCTAGCGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,779,0.047479913,0.015339664,0.003652301,0.26661798,1369,0,T0,0.0,P025 +TCGAGGCGTTTACTCT.02_HFR012_T_5,1.465203442,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,734,0.055350553,0.026568266,0.0,0.16236162,1355,3,T3,1.465203442,P012 +CCACCTACAGGATTGG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,2690,0.028048676,0.016829206,0.0,0.36325192,11587,1,T1,0.0,P023 +GACAGAGAGGGATCTG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,788,0.05762712,0.072881356,0.001129944,0.2039548,1770,0,T0,0.0,P019 +TCTTTCCGTAGCGCAA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1644,0.016739635,0.008756116,0.000515066,0.23255216,3883,3,T3,0.0,P019 +GTCATTTTCCAGGGCT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1258,0.029997414,0.004137574,0.001292992,0.3858288,3867,1,T1,0.0,P022 +AAGGCAGAGGCAAAGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1992,0.010343482,0.04781421,0.00058548,0.1362217,5124,5,T5,0.0,P020 +ATCATGGCACTGTCGG.02_HLH023_T_5,0.945120331,2,T,breast,NR,Post_treatment,Chemo,1,1968,0.037951607,0.008452104,0.0,0.2243951,6034,7,T7,0.945120331,P023 +GTCTCGTGTGATGTCT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,954,0.049976863,0.008792226,0.000462749,0.26145303,2161,1,T1,0.0,P012 +CATGGCGGTAAGGGAA.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1373,0.021113243,0.04606526,0.0,0.22155195,3647,2,T2,0.0,P005 +AAGCCGCTCCCACTTG.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1063,0.04467354,0.01489118,0.0,0.2978236,2619,8,T8,0.0,P013 +GCTGCGAGTGCTCTTC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1718,0.022350397,0.011535688,0.001922615,0.21461187,4161,6,T6,0.0,P002 +ACAGCCGCACAGATTC.02_HLH023_T_5,1.49356431,2,T,breast,NR,Post_treatment,Chemo,1,1260,0.04037491,0.010093727,0.001802451,0.22422494,2774,0,T0,1.49356431,P023 +AACGTTGAGAGAACAG.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1031,0.03234501,0.020408163,0.0,0.2934155,2597,1,T1,0.0,P016 +GGAATAAGTGGTCCGT.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,955,0.020722635,0.01594049,0.0,0.20722635,1882,2,T2,0.0,P005 +CATGCCTTCACTGGGC.01_WX016_T_5,1.49497323,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1785,0.025055433,0.014634146,0.0,0.23592018,4510,6,T6,1.49497323,P016 +AGCGTATAGACGCAAC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,953,0.028473245,0.050564557,0.00245459,0.1963672,2037,2,T2,0.0,P022 +AAGACCTTCCAGAAGG.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1158,0.068265684,0.004059041,0.007749077,0.22804429,2710,3,T3,0.0,P022 +GGACAAGTCATGCATG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,862,0.06772422,0.029896278,0.000610128,0.15375228,1639,0,T0,0.0,P012 +CGAATGTAGTAGCGGT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,567,0.030618893,0.001954397,0.0,0.4820847,1535,1,T1,0.0,P007 +ACAGCTAAGAACAATC.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,717,0.040953547,0.00794621,0.0,0.38997555,1636,2,T2,0.0,P007 +TCACAAGCATCCTAGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,607,0.008408409,0.016816817,0.0,0.42762762,1665,1,T1,0.0,P019 +GCGACCAAGACTAGAT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,473,0.03215434,0.006430868,0.0,0.29581994,933,1,T1,0.0,P007 +GCTGCGATCACTTCAT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,515,0.04497908,0.027196653,0.0041841,0.24476987,956,2,T2,0.0,P019 +CGTTAGACAGGAACGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,428,0.08827786,0.020260492,0.004341534,0.20694645,691,7,T7,0.0,P019 +TGCCCTACAATGCCAT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,726,0.04127199,0.02232747,0.00270636,0.2618403,1478,1,T1,0.0,P019 +GAACATCTCGTTGCCT.02_XLJ019_T_5,2.624379755,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,2264,0.02787404,0.024709959,0.00015067,0.28642458,6637,7,T7,2.624379755,P019 +CCACCTATCACAAACC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1238,0.038541667,0.10520833,0.004166667,0.15381944,2880,1,T1,0.0,P019 +GCTTGAAAGTTAGGTA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,984,0.04822182,0.009644364,0.001808318,0.015069319,1659,5,T5,0.0,P020 +CTAATGGTCTTGTATC.02_XCY022_T_5,2.324943599,2,T,breast,R,Post_treatment,Chemo,1,962,0.044267878,0.014755959,0.007377979,0.20715097,1762,0,T0,2.324943599,P022 +ACTTACTCATGCAATC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,703,0.010719755,0.026799388,0.001531394,0.23047473,1306,7,T7,0.0,P019 +AGTGGGATCGTAGGTT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,787,0.04678945,0.009457442,0.00099552,0.3703335,2009,1,T1,0.0,P022 +TAGAGCTCACTTACGA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,654,0.0527325,0.011505273,0.001917546,0.12176414,1043,7,T7,0.0,P012 +CATATTCCAGCTGTTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2609,0.038547073,0.032616753,0.07614106,0.23943663,9443,6,T6,0.0,P025 +ATCACGAAGCTCTCGG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1043,0.039686974,0.014812744,0.000838457,0.39826718,3578,1,T1,0.0,P025 +AACCGCGAGAAGGGTA.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,534,0.048759624,0.023096664,0.000855432,0.36441404,1169,1,T1,0.0,P016 +GTCACGGCAGCTTCGG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,872,0.028028503,0.008076009,0.000475059,0.3567696,2105,2,T2,0.0,P012 +CACAGGCCATGGTTGT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1943,0.021324778,0.014342329,0.00037743,0.23004341,5299,6,T6,0.0,P018 +CGTCCATTCTTAGCCC.02_HFR012_T_5,1.877274392,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,856,0.051478084,0.01529052,0.0,0.27319062,1962,1,T1,1.877274392,P012 +TTGACTTGTATAGGTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,776,0.019766398,0.04222821,0.013477089,0.0754717,1113,4,T4,0.0,P025 +TCGTACCGTCACCTAA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,2450,0.027058823,0.006117647,0.0,0.1924706,8500,2,T2,0.0,P001 +AAGGTTCAGAGCAATT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1493,0.04520202,0.008333334,0.000505051,0.3060606,3960,4,T4,0.0,P002 +AGTCTTTGTAGCGTAG.02_XLJ019_T_5,1.300548509,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1529,0.05175754,0.014392472,0.0,0.2526986,3613,1,T1,1.300548509,P019 +CACACAACAACGCACC.02_WYP025_T_5,1.244817948,2,T,breast,NR,Post_treatment,Chemo,1,1241,0.04714912,0.016812865,0.005847953,0.24524854,2736,7,T7,1.244817948,P025 +CGAGCCACATCATCCC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1368,0.033950616,0.006858711,0.000685871,0.19170097,2916,3,T3,0.0,P020 +CAGCTAAAGGTGATTA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1173,0.045760907,0.025540972,0.002128414,0.20326357,2819,2,T2,0.0,P022 +AAGCCGCTCATATCGG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,795,0.034127496,0.016097875,0.00515132,0.22150676,1553,0,T0,0.0,P019 +CGTGTAATCTCTGAGA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1338,0.01989839,0.014394581,0.00127011,0.07366639,2362,4,T4,0.0,P022 +TGCGCAGCACGGACAA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1361,0.019875776,0.040496893,0.0,0.30683228,4025,1,T1,0.0,P023 +GTTAAGCAGACCTAGG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1095,0.034157302,0.023820225,0.000898876,0.20494382,2225,3,T3,0.0,P019 +CAACTAGTCACGGTTA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1296,0.03970541,0.009926353,0.000320205,0.28338137,3123,8,T8,0.0,P018 +TTTCCTCAGTGATCGG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,762,0.047486033,0.00726257,0.000558659,0.37206703,1790,1,T1,0.0,P019 +CAGAGAGGTATATGAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,929,0.050717212,0.039959017,0.002561475,0.17008197,1952,1,T1,0.0,P025 +CGATTGAAGCACAGGT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,793,0.05263158,0.038491752,0.00392773,0.07384132,1273,5,T5,0.0,P002 +AAAGTAGGTAGCGCTC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1051,0.03812709,0.00735786,0.0,0.3180602,2990,2,T2,0.0,P005 +CCTAGCTGTCGCGAAA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,949,0.038560413,0.005655527,0.001542416,0.25089973,1945,5,T5,0.0,P012 +CGGAGCTTCAACGCTA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1204,0.0679709,0.01755706,0.000250815,0.397542,3987,1,T1,0.0,P012 +TTGAACGAGTCATGCT.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,951,0.01511335,0.005037783,0.00302267,0.35919395,1985,1,T1,0.0,P022 +CTGAAGTTCTGAGTGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,519,0.042528737,0.018390805,0.003448276,0.23678161,870,1,T1,0.0,P019 +CACCAGGCAAGTTCTG.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1356,0.009237875,0.02078522,0.0,0.23193665,3031,6,T6,0.0,P016 +AAACGGGTCAGCTCTC.01_ZJ005_T_5,1.294270073,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1264,0.03267244,0.015917342,0.000279252,0.2770176,3581,8,T8,1.294270073,P005 +CGATGTAAGAAACCGC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1407,0.02883058,0.017168771,0.000647878,0.20343375,3087,6,T6,0.0,P002 +AAGACCTGTGAAGGCT.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,949,0.0736532,0.005892256,0.0,0.256734,2376,12,T12,0.0,P004 +ACGGGCTCATCGATTG.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,643,0.031867433,0.001912046,0.000637349,0.44104525,1569,1,T1,0.0,P012 +TGCACCTTCTGAAAGA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1692,0.015349194,0.07137375,0.0012791,0.11409567,3909,12,T12,0.0,P002 +TGCACCTCATGCTAGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1271,0.060814857,0.017974835,0.001198322,0.32204914,3338,1,T1,0.0,P019 +AGCTTGAGTGTGCGTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1975,0.024981217,0.022539444,0.000563486,0.17129977,5324,5,T5,0.0,P025 +GCACTCTAGCGTCTAT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1061,0.01860053,0.034543846,0.001328609,0.22674933,2258,2,T2,0.0,P018 +TGTTCCGTCAACACCA.01_HLH023_T_5,2.473509525,1,T,breast,NR,Pre_treatment,Chemo,1,1062,0.031438936,0.004030633,0.0,0.32728738,2481,2,T2,2.473509525,P023 +GACCTGGTCTTGCATT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1345,0.02937788,0.068836406,0.000864055,0.22523041,3472,12,T12,0.0,P018 +GGGCACTTCTTGAGGT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,917,0.035433073,0.021434821,0.0,0.3263342,2286,1,T1,0.0,P012 +TTAACTCGTATATCCG.02_ZJ005_T_5,2.450656844,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1391,0.029960053,0.005992011,0.0,0.1964048,3004,7,T7,2.450656844,P005 +CTCGGAGCAGTCACTA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1022,0.069418386,0.009380863,0.008130081,0.04252658,1599,3,T3,0.0,P025 +GCGCAGTCACCACGTG.02_XLJ019_T_5,1.591690844,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1257,0.04001231,0.037550017,0.000923361,0.2776239,3249,1,T1,1.591690844,P019 +TCGCGTTTCGGCGGTT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,895,0.02587269,0.009445585,0.000410678,0.34907597,2435,2,T2,0.0,P001 +TCTGAGATCAACGAAA.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,643,0.019538188,0.023978686,0.0,0.15008882,1126,5,T5,0.0,P018 +TGACTTTCAGAGCCAA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1388,0.025046138,0.025046138,0.001054574,0.2755075,3793,4,T4,0.0,P002 +TGCACCTAGACTAGGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,619,0.045614034,0.04122807,0.004385965,0.22192982,1140,1,T1,0.0,P019 +GCTGCAGGTCAAAGCG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,505,0.078781515,0.005252101,0.0,0.3539916,952,1,T1,0.0,P007 +AACTCCCAGCCTATGT.01_XLJ019_T_5,1.438917312,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,765,0.03908956,0.013854528,0.002968827,0.41019297,2021,1,T1,1.438917312,P019 +TAGCCGGCACTTCGAA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1296,0.009764919,0.03652803,0.001808318,0.21518987,2765,3,T3,0.0,P019 +GGCGTGTTCGTCACGG.02_LCL002_T_5,1.821072696,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1554,0.012633892,0.020049438,0.000823949,0.21971986,3641,7,T7,1.821072696,P002 +CACACTCTCTGGTATG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1017,0.01904762,0.018045112,0.003007519,0.1754386,1995,3,T3,0.0,P019 +CGCCAAGAGAGTTGGC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,999,0.022845276,0.033229493,0.0,0.1926272,1926,0,T0,0.0,P013 +CAAGTTGAGACGCAAC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1059,0.058665644,0.004601227,0.0,0.2273773,2608,3,T3,0.0,P012 +GCCTCTAGTCAGAGGT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1977,0.020490928,0.01430096,0.000853789,0.17588048,4685,6,T6,0.0,P025 +GTCTTCGAGTTATCGC.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,906,0.06262231,0.018917156,0.002609263,0.124592304,1533,7,T7,0.0,P022 +TGGCTGGCAGGCAGTA.01_ZJ005_T_5,0.896023396,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1860,0.066639245,0.003496504,0.0,0.2725216,4862,2,T2,0.896023396,P005 +ATCATGGCAATGGTCT.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1211,0.028660761,0.005211047,0.001563314,0.19645649,1919,4,T4,0.0,P019 +CAGCTAAAGAGCTGCA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,535,0.08911917,0.003108808,0.00103627,0.030051814,965,4,T4,0.0,P023 +GTGCAGCCATCCGTGG.01_XLJ019_T_5,1.393295909,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,832,0.029690461,0.031585597,0.00315856,0.20467466,1583,3,T3,1.393295909,P019 +TCAGGTAGTTCGGGCT.01_XCY022_T_5,0.772941166,1,T,breast,R,Pre_treatment,Chemo,1,1808,0.038562875,0.02491018,0.002155689,0.1702994,4175,5,T5,0.772941166,P022 +CGACTTCAGTGTACCT.01_XLJ019_T_5,1.191844682,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,978,0.05280685,0.018078022,0.02568982,0.23549001,2102,7,T7,1.191844682,P019 +TAGACCAGTCTCGTTC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,2356,0.05057876,0.02075994,0.0,0.27440867,7948,2,T2,0.0,P013 +ACGATGTTCGAGAGCA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1605,0.043339152,0.00814427,0.0,0.16055846,3438,3,T3,0.0,P020 +AGCATACCATCCCATC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,790,0.04839587,0.01576944,0.002718869,0.28602502,1839,0,T0,0.0,P019 +CACAGTATCCATGAGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1435,0.031326998,0.029919043,0.002463921,0.1499472,2841,3,T3,0.0,P019 +TGTGTTTAGAACAACT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1624,0.06703214,0.032145526,0.000996761,0.18066284,4013,0,T0,0.0,P025 +GCGCCAATCTCCAACC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1517,0.03446691,0.03538603,0.0,0.21691176,4352,8,T8,0.0,P013 +TACCTTAGTCATGCCG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1117,0.057911064,0.004653568,0.001551189,0.21406412,1934,0,T0,0.0,P019 +CACAGTATCATGGTCA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1612,0.039038263,0.016546018,0.0,0.25620475,3868,11,T11,0.0,P013 +AGATCTGCAAGCCGTC.02_HLH023_T_5,1.928396799,2,T,breast,NR,Post_treatment,Chemo,1,1493,0.046651784,0.025669644,0.000223214,0.3091518,4480,2,T2,1.928396799,P023 +GGATTACGTTTAGGAA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,880,0.042067308,0.043269232,0.001802885,0.19411057,1664,3,T3,0.0,P019 +AGCCTAATCTTGCCGT.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,449,0.022508038,0.03215434,0.0,0.17363344,622,5,T5,0.0,P018 +AACACGTAGAACAACT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1911,0.027704168,0.003613587,0.000963623,0.18525657,4151,3,T3,0.0,P020 +ACGCCGACATTTGCCC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1068,0.07032967,0.052197803,0.005494506,0.055494506,1820,4,T4,0.0,P025 +GGACATTGTACTTGAC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,748,0.012285012,0.06552006,0.002457002,0.03276003,1221,2,T2,0.0,P002 +CCGTGGATCTTGTATC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1194,0.04601449,0.005797102,0.0,0.24601449,2760,12,T12,0.0,P005 +TACGGGCCATAGGATA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,571,0.06521739,0.003623189,0.00120773,0.1147343,828,1,T1,0.0,P012 +CGTCAGGTCAGTACGT.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,857,0.045641027,0.006666667,0.0,0.38051283,1950,1,T1,0.0,P023 +CGGCTAGAGGGTTCCC.01_XLJ019_T_5,1.762458516,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,986,0.024852071,0.01617357,0.001183432,0.33570018,2535,7,T7,1.762458516,P019 +TGACTAGTCATCTGTT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,3882,0.027802166,0.033728417,0.001170618,0.13776705,13668,4,T4,0.0,P025 +GCTGGGTCACAGCCCA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,815,0.096125185,0.011922504,0.0,0.03651267,1342,5,T5,0.0,P019 +CTAGTGAAGATGGGTC.01_JLR004_T_5,1.992356165,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,905,0.026475456,0.048538335,0.0,0.21345836,1813,0,T0,1.992356165,P004 +GGGACCTAGATATGCA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,2220,0.07393231,0.038074132,0.000604351,0.048751008,4964,3,T3,0.0,P019 +CTACACCGTACCGTAT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,553,0.07692308,0.00795756,0.0,0.04509284,754,4,T4,0.0,P012 +GCAATCAAGTGATCGG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1288,0.050306488,0.009723103,0.0,0.43140984,4731,1,T1,0.0,P023 +CGAGAAGGTATCAGTC.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1188,0.08693081,0.026020106,0.0,0.34092253,3382,0,T0,0.0,P004 +ACTTGTTAGCCACTAT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1350,0.06643071,0.012523823,0.0,0.23250748,3673,6,T6,0.0,P023 +ATCCGAAGTGGTTTCA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,843,0.04773463,0.004854369,0.006472492,0.42192557,2472,1,T1,0.0,P019 +GGGAATGCAATACGCT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,877,0.05936073,0.02573682,0.0,0.31631383,2409,2,T2,0.0,P023 +CTGCTGTGTGAGGCTA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1632,0.018424397,0.006670902,0.000635324,0.16486658,3148,3,T3,0.0,P020 +CTCGGGAGTACGAAAT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,451,0.022932023,0.004914005,0.0,0.5266175,1221,1,T1,0.0,P007 +GCGACCACAGGAATGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,641,0.046829972,0.014409222,0.002881844,0.2831412,1388,0,T0,0.0,P019 +CATGGCGGTCCGTGAC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,588,0.08744993,0.00400534,0.0,0.39853138,1498,0,T0,0.0,P013 +CTCGGAGCATCTCCCA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,965,0.0641602,0.027789129,0.002043318,0.29342052,2447,2,T2,0.0,P022 +ATCATCTGTCAAGCGA.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1296,0.043263964,0.005750274,0.0,0.36473164,3652,2,T2,0.0,P023 +GATCGTACAGACTCGC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1698,0.036117937,0.022358723,0.0,0.24668305,4070,8,T8,0.0,P005 +TCAGATGGTCTAGGTT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,605,0.047265362,0.006752194,0.0,0.43281567,1481,1,T1,0.0,P007 +GGTATTGAGATGAGAG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1707,0.02253187,0.011265935,0.000889416,0.15683368,3373,6,T6,0.0,P002 +CTCTAATCAGTGACAG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1375,0.033103902,0.009832841,0.0,0.17436905,3051,2,T2,0.0,P005 +TATGCCCGTTGTCTTT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,865,0.025332225,0.070182726,0.0,0.3509136,2408,1,T1,0.0,P001 +TACTTACGTCAGTGGA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1385,0.0553427,0.04129417,0.008514262,0.058748405,2349,4,T4,0.0,P025 +ACGATGTGTACATCCA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1668,0.026522594,0.018009169,0.001309758,0.11525868,3054,4,T4,0.0,P018 +ATCATGGAGCTAAACA.02_XLJ019_T_5,1.436425072,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,2204,0.045159083,0.025829626,0.000342114,0.21690044,5846,0,T0,1.436425072,P019 +ACGATACCACTCAGGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,670,0.03983597,0.009373169,0.001171646,0.42062098,1707,1,T1,0.0,P019 +CACATAGTCATTCACT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1022,0.042172525,0.009584664,0.000319489,0.39233226,3130,1,T1,0.0,P023 +ACGCCAGTCTCGGACG.02_WYP025_T_5,1.052126629,2,T,breast,NR,Post_treatment,Chemo,1,1382,0.022341376,0.008936551,0.0,0.20524278,3357,3,T3,1.052126629,P025 +TGGTTCCGTACAGCAG.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1818,0.068724886,0.009304293,0.000211461,0.12772256,4729,5,T5,0.0,P004 +GACTGCGAGAGATGAG.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,999,0.047817048,0.06569646,0.0,0.15841995,2405,0,T0,0.0,P005 +GCGCAACTCCCTAACC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,860,0.039390087,0.020965692,0.0,0.063532405,1574,0,T0,0.0,P012 +TGTTCCGGTTTGTTTC.01_JLR004_T_5,1.085422962,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1770,0.065390006,0.036665108,0.0,0.16627744,4282,5,T5,1.085422962,P004 +TGAGCCGCAATACGCT.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,968,0.038262255,0.014348346,0.0,0.32801914,2509,11,T11,0.0,P013 +CCCTCCTCAAAGTCAA.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1817,0.06302794,0.019059995,0.0,0.17890406,4617,8,T8,0.0,P005 +TAGTTGGCACATGTGT.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,499,0.06097561,0.003325942,0.001108647,0.32372504,902,0,T0,0.0,P022 +AACTCCCGTTGCCTCT.02_WYP025_T_5,1.146761545,2,T,breast,NR,Post_treatment,Chemo,1,1296,0.027959548,0.03420583,0.001189768,0.2117787,3362,0,T0,1.146761545,P025 +AGATTGCCATGGGACA.03_LBH013_T_5,2.248323502,3,T,liver,R,Progression,Chemo,1,1520,0.08033419,0.029134532,0.0,0.25835475,4668,8,T8,2.248323502,P013 +GCTGCGACAAGCTGAG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1374,0.020792468,0.025500197,0.001569243,0.11573166,2549,3,T3,0.0,P020 +TCATTACCAATTCCTT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1526,0.054760594,0.025866814,0.003577325,0.24656026,3634,7,T7,0.0,P019 +CGGACTGGTGCAGGTA.01_XLJ019_T_5,1.769857556,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1749,0.029908972,0.019245774,0.001820546,0.15916775,3845,7,T7,1.769857556,P019 +CCACCTAGTCATATGC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1129,0.048859935,0.008957655,0.0,0.27442998,2456,2,T2,0.0,P013 +CCGGGATAGTCCCACG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1191,0.058864266,0.013157895,0.0,0.25138503,2888,0,T0,0.0,P013 +GGATGTTGTCTAAAGA.01_YSS020_T_5,0.787272303,1,T,breast,R,Pre_treatment,Chemo,1,2592,0.039087493,0.019335095,0.003477535,0.13506746,7189,3,T3,0.787272303,P020 +ATTGGACTCAGAGCTT.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1308,0.04119223,0.01406564,0.0,0.2555258,2986,1,T1,0.0,P005 +TAGGCATTCCACTCCA.02_XLJ019_T_5,4.270341323,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1235,0.08630952,0.020833334,0.002976191,0.04563492,2016,7,T7,4.270341323,P019 +CTAGCCTGTGCTGTAT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,601,0.07044411,0.004594181,0.0,0.3300153,1306,2,T2,0.0,P007 +TGGGCGTCAACTGGCC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1098,0.028901733,0.013728323,0.0,0.22507225,2768,0,T0,0.0,P005 +CCGGGATTCTTGTACT.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1376,0.041688245,0.00647333,0.0,0.31305024,3862,8,T8,0.0,P005 +CTAGAGTTCAAAGTAG.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,579,0.01632653,0.023469388,0.002040816,0.24285714,980,6,T6,0.0,P018 +GGACAGACAGCTGCTG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1291,0.03718638,0.055107526,0.003584229,0.08512545,2232,0,T0,0.0,P025 +CGGACTGGTACCTACA.01_XLJ019_T_5,0.68428399,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1636,0.023926381,0.014110429,0.001431493,0.34621677,4890,1,T1,0.68428399,P019 +TGTATTCAGACACTAA.02_LLY018_T_5,2.264840951,2,T,breast,NR,Post_treatment,Chemo,1,1230,0.036505867,0.012059974,0.037483703,0.24022165,3068,12,T12,2.264840951,P018 +GTAGTCATCCATGAGT.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,2294,0.03595607,0.006920415,0.0,0.25184295,6647,5,T5,0.0,P005 +CTCCTAGCATCCGGGT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1134,0.021408625,0.005274589,0.0,0.4089358,3223,1,T1,0.0,P012 +AAAGATGTCTTACCGC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,822,0.01686936,0.006669282,0.000784621,0.47038054,2549,12,T12,0.0,P012 +AGCTCCTAGCCCAACC.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1363,0.027289838,0.017879548,0.000627353,0.2647428,3188,6,T6,0.0,P018 +TACTTACAGCATCATC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,913,0.033004925,0.030541873,0.0,0.30640393,2030,7,T7,0.0,P001 +TCTCATAGTGAGTATA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,751,0.0872093,0.001937985,0.000968992,0.09205426,1032,4,T4,0.0,P022 +AAACCTGTCCACGTGG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,592,0.029691212,0.001781473,0.0,0.50178146,1684,1,T1,0.0,P007 +CACACTCGTACCATCA.02_WYP025_T_5,1.419705502,2,T,breast,NR,Post_treatment,Chemo,1,1617,0.018159807,0.017675545,0.000726392,0.262954,4130,7,T7,1.419705502,P025 +GCATGTAGTGCACTTA.01_XLJ019_T_5,1.449893223,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,835,0.055098165,0.029765675,0.002533249,0.24129196,1579,7,T7,1.449893223,P019 +TACTTACGTTGTCGCG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,777,0.03717472,0.046468403,0.003097893,0.2527881,1614,0,T0,0.0,P018 +GATCGCGGTCGAATCT.01_XLJ019_T_5,1.414948008,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1409,0.02976364,0.045229062,0.002042603,0.19054566,3427,3,T3,1.414948008,P019 +AGGTCATGTCTCTCGT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,819,0.080694586,0.001021451,0.001021451,0.31869254,1958,8,T8,0.0,P013 +CTTAACTGTGACGGTA.02_HFR012_T_5,1.885904573,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,509,0.09727626,0.002594034,0.001297017,0.09079118,771,3,T3,1.885904573,P012 +AACTTTCCAAGCGCTC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,715,0.046778042,0.020047734,0.004295943,0.4085919,2095,1,T1,0.0,P019 +AGAGCTTGTGATGTGG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1204,0.06968414,0.008791924,0.0,0.24649951,3071,8,T8,0.0,P005 +TTCGGTCGTGGTTTCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,975,0.024033045,0.03379647,0.001126549,0.36312428,2663,2,T2,0.0,P025 +CAGCAGCAGTGTACGG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1102,0.034274194,0.014112903,0.001680108,0.32728493,2976,1,T1,0.0,P019 +GCCTCTAAGATCGATA.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1128,0.06585057,0.014352047,0.0,0.24145208,2369,8,T8,0.0,P005 +TGTTCCGTCGATAGAA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,760,0.05521092,0.013647643,0.003101737,0.2605459,1612,1,T1,0.0,P012 +GCATACATCACTCCTG.02_XLJ019_T_5,1.745262487,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,916,0.08189158,0.008073818,0.00461361,0.19434832,1734,7,T7,1.745262487,P019 +TTCGAAGCAACGATGG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1174,0.04709648,0.014631916,0.001371742,0.12665752,2187,3,T3,0.0,P020 +GGGTTGCAGGGTTTCT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,731,0.032797426,0.06045016,0.003858521,0.23086816,1555,1,T1,0.0,P019 +CATCGGGAGTAGCGGT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,611,0.012944984,0.010787486,0.003236246,0.1639698,927,0,T0,0.0,P002 +AGGCCGTAGGGCTTGA.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1384,0.05397807,0.006747259,0.0,0.2679224,3557,5,T5,0.0,P005 +CGCTTCAAGATGTAAC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1311,0.057101864,0.013773315,0.0,0.30903873,3485,8,T8,0.0,P013 +AGGCCACCAGCAGTTT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,2690,0.019307483,0.014360938,0.000478698,0.08345301,6267,3,T3,0.0,P020 +GCATGATCAACTGCGC.01_XLJ019_T_5,1.25878735,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,985,0.024527337,0.031681143,0.002043945,0.12927951,1957,5,T5,1.25878735,P019 +TCAACGATCCGTTGTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1391,0.02676399,0.046634227,0.00648824,0.0567721,2466,4,T4,0.0,P025 +GTCGGGTAGATGCCAG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,976,0.035812672,0.016528925,0.000688705,0.120523416,1452,3,T3,0.0,P018 +TGTGTTTGTTGGGACA.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,763,0.055882353,0.005294118,0.0,0.2982353,1700,0,T0,0.0,P016 +TCCCGATTCCGCATCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1142,0.034507044,0.022183098,0.002112676,0.27922535,2840,6,T6,0.0,P025 +CATCAAGGTGACCAAG.02_XLJ019_T_5,1.532239129,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1323,0.03699422,0.021965317,0.000385356,0.21657033,2595,3,T3,1.532239129,P019 +CCTCAGTGTCCGCTGA.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1160,0.02551181,0.011023622,0.0,0.33574802,3175,2,T2,0.0,P005 +AGAATAGGTGGCGAAT.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,678,0.031503152,0.031503152,0.00090009,0.15751575,1111,5,T5,0.0,P018 +TACACGAGTAAATGAC.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1421,0.049325764,0.004258339,0.001419446,0.20652945,2818,5,T5,0.0,P022 +ATCTACTCAACTGGCC.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1411,0.06545671,0.04641476,0.000297531,0.17435287,3361,2,T2,0.0,P004 +CAGGTGCAGTGGACGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,830,0.029736942,0.006862371,0.001524971,0.453679,2623,1,T1,0.0,P019 +GGGCACTTCTTGACGA.02_XLJ019_T_5,1.358689521,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1473,0.053626783,0.005269684,0.0,0.25077495,3226,7,T7,1.358689521,P019 +GCTGCGATCCGAACGC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1635,0.028853314,0.010982874,0.0,0.35014892,5372,2,T2,0.0,P005 +AAGGCAGGTCTAGCCG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,877,0.06260229,0.02086743,0.0,0.36865795,2444,1,T1,0.0,P023 +AACCATGAGTGGACGT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,836,0.04558088,0.003891051,0.000555864,0.34797108,1799,4,T4,0.0,P023 +AAGTCTGTCCTTTACA.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1544,0.09566185,0.005005562,0.0,0.22413793,3596,0,T0,0.0,P004 +GGCGTGTCATCCTAGA.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,636,0.040926643,0.006949807,0.0,0.17451738,1295,0,T0,0.0,P023 +CGCTGGACAGTATCTG.01_ZJ005_T_5,0.939425444,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1737,0.086758934,0.010741582,0.0,0.24581698,4841,8,T8,0.939425444,P005 +CGAGAAGCACTGCCAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,822,0.018627452,0.02990196,0.001470588,0.25833333,2040,0,T0,0.0,P025 +TGATTTCGTGCAACGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,971,0.034715526,0.035679847,0.0024108,0.2029894,2074,3,T3,0.0,P019 +GATTCAGAGTGCCATT.01_HFR012_T_5,0.949481667,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1166,0.039000377,0.006058311,0.0,0.28209013,2641,0,T0,0.949481667,P012 +GTCACGGTCTGTGCAA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1557,0.03884415,0.058739934,0.000947418,0.2643297,4222,2,T2,0.0,P018 +GCACTCTTCACGAAGG.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,558,0.06906339,0.004730369,0.003784295,0.2923368,1057,0,T0,0.0,P012 +GGGACCTGTGTAATGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1686,0.025365103,0.012298232,0.002049705,0.24212144,3903,3,T3,0.0,P019 +GGGCATCGTATAGGTA.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,873,0.052478135,0.058309037,0.0,0.12244898,1715,0,T0,0.0,P004 +GCTTGAAGTCATATCG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1821,0.030487806,0.010670732,0.0,0.25057164,5248,8,T8,0.0,P005 +AGTGAGGAGGTAAACT.02_XLJ019_T_5,3.196318092,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,2197,0.055336747,0.009255612,0.0,0.1988972,5078,7,T7,3.196318092,P019 +AAACGGGAGTGGGTTG.02_XLJ019_T_5,4.123223383,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1459,0.09198374,0.027336534,0.0,0.16328038,2707,7,T7,4.123223383,P019 +AGTGGGAAGCCCAACC.01_WYP025_T_5,1.357923512,1,T,breast,NR,Pre_treatment,Chemo,1,4026,0.015073181,0.031238623,0.001601981,0.12364378,13733,4,T4,1.357923512,P025 +GCACATACATGGTAGG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,564,0.019569471,0.00456621,0.0,0.5146771,1533,1,T1,0.0,P007 +ATCTACTGTCCTCCAT.01_XLJ019_T_5,1.693777893,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,668,0.045906655,0.007651109,0.004590666,0.25401685,1307,7,T7,1.693777893,P019 +CTCGGAGAGTAGGTGC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,936,0.0592723,0.03521127,0.001760563,0.12793428,1704,3,T3,0.0,P019 +ACCGTAAAGGCTAGCA.02_HFR012_T_5,1.672671368,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1133,0.06191629,0.001729505,0.0,0.2943618,2891,7,T7,1.672671368,P012 +TCACGAATCATCTGTT.02_HFR012_T_5,1.958578087,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,881,0.051623203,0.019159127,0.0,0.15274082,1879,3,T3,1.958578087,P012 +CTAAGACCAATGGACG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1586,0.00984366,0.023451071,0.000579039,0.14765489,3454,3,T3,0.0,P020 +ACGGAGATCTCGATGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1350,0.027180405,0.002986858,0.000896057,0.34229392,3348,1,T1,0.0,P020 +GCATACATCGTAGATC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1313,0.0441878,0.02460457,0.0,0.34019583,3983,2,T2,0.0,P023 +GTCTCGTCATGACATC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1498,0.015272033,0.052179445,0.003499841,0.05886096,3143,4,T4,0.0,P025 +GCGGGTTCAAGCTGTT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,1194,0.03473054,0.005748503,0.0,0.4136527,4175,2,T2,0.0,P001 +CGATCGGCATCCTAGA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,532,0.063872255,0.029940119,0.000998004,0.19061877,1002,1,T1,0.0,P012 +AATCGGTTCGAATCCA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1267,0.038758073,0.012085851,0.000416754,0.43675765,4799,2,T2,0.0,P023 +CTACGTCCACCAGCAC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,501,0.06157849,0.07632264,0.000867303,0.1613183,1153,1,T1,0.0,P012 +CTTAACTAGCTTATCG.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1391,0.0595528,0.004206331,0.001106929,0.3683861,4517,1,T1,0.0,P022 +CATCGAAAGCAGCCTC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,596,0.052700922,0.005270092,0.002635046,0.04611331,759,3,T3,0.0,P019 +CTTACCGAGGCGATAC.01_XLJ019_T_5,0.787127733,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1607,0.018274112,0.01852792,0.000507614,0.24796954,3940,3,T3,0.787127733,P019 +CAACCTCTCCGAATGT.02_HFR012_T_5,1.138173168,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1028,0.03311547,0.014379085,0.0,0.24183007,2295,2,T2,1.138173168,P012 +TGCGCAGTCGAGAGCA.01_XLJ019_T_5,2.470591297,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,915,0.087987356,0.035827186,0.005268704,0.22813489,1898,1,T1,2.470591297,P019 +ACGCCGATCACAATGC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,798,0.066628374,0.048822515,0.0,0.21309592,1741,2,T2,0.0,P001 +TTGGAACGTAAGAGAG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,890,0.01899593,0.026684757,0.001809136,0.3170511,2211,2,T2,0.0,P018 +GCTGCTTGTCAGAGGT.02_WYP025_T_5,0.895473413,2,T,breast,NR,Post_treatment,Chemo,1,1668,0.025243688,0.011247188,0.001499625,0.19395152,4001,6,T6,0.895473413,P025 +GTCACGGGTGTGCGTC.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1079,0.02530311,0.03953611,0.001581444,0.12651555,1897,2,T2,0.0,P018 +CCACTACAGGCGTACA.01_ZJ005_T_5,0.90590335,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1746,0.056695048,0.00619195,0.000193498,0.2850232,5168,11,T11,0.90590335,P005 +CTCGAAAGTGTAATGA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,592,0.04563336,0.004720693,0.0,0.38394964,1271,1,T1,0.0,P007 +AACTCTTGTAAGTGTA.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1734,0.039634146,0.007926829,0.000203252,0.25447154,4920,8,T8,0.0,P005 +GGAACTTTCTACCAGA.02_LLY018_T_5,2.208893444,2,T,breast,NR,Post_treatment,Chemo,1,1200,0.010116338,0.004046535,0.000505817,0.1704603,1977,7,T7,2.208893444,P018 +CGGGTCAGTTATGTGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1428,0.035386633,0.020532984,0.007426824,0.06116208,2289,4,T4,0.0,P025 +CAGCGACGTCTCTCTG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1568,0.037483845,0.019819044,0.000646273,0.3084877,4642,1,T1,0.0,P022 +GCTCCTATCTGCTGCT.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1753,0.036551077,0.004498594,0.000562324,0.39175257,5335,4,T4,0.0,P019 +CCGGTAGGTCAAACTC.01_YSS020_T_5,1.851847392,1,T,breast,R,Pre_treatment,Chemo,1,1766,0.031640913,0.024282562,0.000735835,0.244052,4077,3,T3,1.851847392,P020 +CAGCGACGTTTCCACC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,784,0.029616725,0.012195122,0.0,0.26713124,1722,2,T2,0.0,P001 +CCTACACCAAGTCATC.03_LBH013_T_5,1.6783993,3,T,liver,R,Progression,Chemo,1,2327,0.021914277,0.05220754,0.000161134,0.17080244,6206,8,T8,1.6783993,P013 +AGAATAGGTGCTAGCC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,661,0.02826087,0.013768116,0.0,0.29710144,1380,1,T1,0.0,P005 +CAAGGCCTCTAAGCCA.02_XLJ019_T_5,1.768085567,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1116,0.036549706,0.03167641,0.000974659,0.16471735,2052,7,T7,1.768085567,P019 +TTAGGACAGATCCCAT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1076,0.04864653,0.0219694,0.0,0.23695567,2549,8,T8,0.0,P013 +AGACGTTAGCTGAACG.02_HLH023_T_5,0.969014249,2,T,breast,NR,Post_treatment,Chemo,1,1773,0.04103786,0.030447446,0.00026476,0.05454064,3777,7,T7,0.969014249,P023 +GTTCGGGCAAGCCTAT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1026,0.053454205,0.010003126,0.000625195,0.46608314,3199,1,T1,0.0,P007 +GGACAAGTCTATCCTA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1132,0.04342047,0.040319007,0.001329198,0.1670359,2257,12,T12,0.0,P002 +GTTACAGGTCTAGGTT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,707,0.038580246,0.03780864,0.0,0.22222222,1296,6,T6,0.0,P001 +GACGTGCAGATATACG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,990,0.027484143,0.00422833,0.001761804,0.41437632,2838,1,T1,0.0,P025 +AACTCTTAGGTGATAT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1402,0.016913319,0.033524614,0.002718212,0.205074,3311,7,T7,0.0,P022 +ACGCCGAAGAGGTTGC.01_LCL002_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,577,0.030563515,0.00286533,0.020057306,0.27698186,1047,1,T1,0.0,P002 +TTAGTTCGTACCTACA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1072,0.066176474,0.025086505,0.001297578,0.21410035,2312,0,T0,0.0,P022 +CAGCTGGAGTTCGCAT.02_LBH013_T_5,1.550988016,2,T,liver,R,Post_treatment,Chemo,1,2008,0.041268244,0.006416709,0.0,0.36524913,7948,8,T8,1.550988016,P013 +AGAGCGATCCATGCTC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,843,0.026742302,0.029173419,0.001620746,0.115072936,1234,4,T4,0.0,P002 +AGAATAGGTCTCCCTA.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1840,0.02923077,0.019807693,0.0,0.16461538,5200,5,T5,0.0,P016 +TCTGAGAGTATGCTTG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,954,0.044582393,0.006207675,0.001693002,0.25282168,1772,2,T2,0.0,P022 +GACGCGTTCCAGATCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1216,0.044226874,0.053004727,0.002363268,0.20695476,2962,7,T7,0.0,P025 +CATCAGAAGCAATATG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1404,0.05773321,0.004254026,0.000607718,0.30416286,3291,0,T0,0.0,P002 +TAAGCGTGTCAGATAA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1003,0.059065934,0.004807693,0.010302198,0.086538464,1456,4,T4,0.0,P025 +ACGGGTCCAACACGCC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,663,0.055,0.024,0.005,0.048,1000,3,T3,0.0,P019 +TTGACTTCACAGGTTT.01_HFR012_T_5,2.072731056,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,857,0.021261517,0.007087172,0.000708717,0.1601701,1411,7,T7,2.072731056,P012 +TACACGATCTGATACG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,3401,0.029301839,0.007923457,0.002840485,0.21460608,13378,3,T3,0.0,P022 +AGCTTGAGTCTTCAAG.02_LLY018_T_5,0.464186045,2,T,breast,NR,Post_treatment,Chemo,1,3610,0.022015378,0.03868879,0.000161878,0.14342372,12355,5,T5,0.464186045,P018 +GACTGCGAGATGCGAC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1535,0.07447466,0.011433869,0.000309023,0.16872682,3236,4,T4,0.0,P019 +GTGTGCGCAAAGGTGC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1018,0.018492177,0.036510196,0.0,0.22427692,2109,5,T5,0.0,P005 +GTGTGCGAGCGTCTAT.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1008,0.079655945,0.007853403,0.0,0.29506359,2674,8,T8,0.0,P005 +AACTCTTTCAGGTAAA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,817,0.05755396,0.017985612,0.0,0.36176774,1946,1,T1,0.0,P001 +CCTAGCTAGGACACCA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1280,0.06409203,0.007669132,0.001643385,0.28704464,3651,2,T2,0.0,P022 +ATCCACCTCAGAGGTG.01_YSS020_T_5,1.709742397,1,T,breast,R,Pre_treatment,Chemo,1,1211,0.017964073,0.03512974,0.001596806,0.15528943,2505,5,T5,1.709742397,P020 +ACCGTAATCGCTTGTC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1084,0.028782895,0.029605264,0.0,0.26521382,2432,8,T8,0.0,P013 +TGGCGCAAGTGGAGAA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,819,0.0369379,0.005353319,0.002141328,0.32441112,1868,1,T1,0.0,P019 +GCGCAGTGTATTAGCC.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,574,0.022894522,0.003270646,0.0,0.43826655,1223,1,T1,0.0,P007 +CTCGGAGAGAGTGAGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1210,0.05180723,0.022891566,0.001204819,0.2,2490,3,T3,0.0,P019 +GGCAATTAGTCCGGTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1581,0.011556241,0.03081664,0.008089368,0.057395995,2596,4,T4,0.0,P025 +CTACATTTCTGTGCAA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1419,0.010973937,0.01680384,0.002057613,0.17832647,2916,6,T6,0.0,P022 +CGGACGTCACCACGTG.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1116,0.07976126,0.004340749,0.0,0.052088987,1843,0,T0,0.0,P013 +CCTCTGACAGGTGGAT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,897,0.034833092,0.040154815,0.002418965,0.2665699,2067,2,T2,0.0,P019 +GTTAAGCAGGCTACGA.02_YSS020_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,724,0.03441011,0.002808989,0.001404494,0.24648876,1424,0,T0,0.0,P020 +GACACGCGTACGAAAT.01_YSS020_T_5,1.245482026,1,T,breast,R,Pre_treatment,Chemo,1,1496,0.017131243,0.004065041,0.0014518,0.19512194,3444,3,T3,1.245482026,P020 +GGCCGATCATCGATGT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,769,0.037492678,0.023432923,0.0,0.29408318,1707,2,T2,0.0,P001 +GAACGGAAGCCACTAT.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,923,0.030369962,0.012700166,0.002208724,0.23467697,1811,5,T5,0.0,P018 +GGGCATCGTCCGAATT.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1544,0.015163607,0.013367917,0.0,0.34297687,5012,12,T12,0.0,P005 +AAGACCTAGTAAGTAC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,646,0.04562453,0.003739716,0.002991773,0.33507854,1337,0,T0,0.0,P019 +GACGGCTCAAGCTGGA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1040,0.034075573,0.004723347,0.000337382,0.34547907,2964,0,T0,0.0,P012 +TGGGAAGCACTGTCGG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,790,0.03322884,0.05768025,0.003134796,0.21003135,1595,1,T1,0.0,P019 +CGCGTTTGTACCTACA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1179,0.037916154,0.011405672,0.001233046,0.24568434,3244,12,T12,0.0,P023 +TCAGCAAAGTTAACGA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1285,0.046335697,0.022931442,0.0,0.35248226,4230,2,T2,0.0,P023 +GCAGCCAGTCAGCTAT.02_LLY018_T_5,1.404837496,2,T,breast,NR,Post_treatment,Chemo,1,1443,0.04642639,0.019242518,0.006108736,0.24862553,3274,0,T0,1.404837496,P018 +TAGTTGGGTCCGAAGA.02_WYP025_T_5,0.775709157,2,T,breast,NR,Post_treatment,Chemo,1,1831,0.030014489,0.009521838,0.0,0.23225005,4831,5,T5,0.775709157,P025 +GGATTACCAGCTGTAT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1075,0.02082221,0.038974907,0.008008543,0.085958354,1873,4,T4,0.0,P025 +ATGAGGGGTCAGAATA.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,477,0.04219949,0.001278772,0.0,0.2595908,782,5,T5,0.0,P018 +TGGACGCGTTTAGGAA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1303,0.046347454,0.002148558,0.0,0.37630448,3258,4,T4,0.0,P023 +ACACCAACACGAAATA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1582,0.036442753,0.088931195,0.000815883,0.11775904,3677,8,T8,0.0,P018 +CCACCTAAGCTGAACG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,607,0.039325844,0.004915731,0.0,0.38764045,1424,6,T6,0.0,P007 +TGGACGCTCGAATGGG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,467,0.084165476,0.025677603,0.009985735,0.049928673,701,2,T2,0.0,P002 +TTGACTTCACATTCGA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1174,0.075203866,0.024765931,0.000302024,0.30172154,3311,8,T8,0.0,P013 +GTACGTAGTGGGTATG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1698,0.020840693,0.007771106,0.004238785,0.13422818,2831,4,T4,0.0,P025 +CGTTGGGGTAAGCACG.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1205,0.042912874,0.013437364,0.00260078,0.2058951,2307,5,T5,0.0,P022 +AAGTCTGCAGTACACT.02_LBH013_T_5,1.155789774,2,T,liver,R,Post_treatment,Chemo,1,1262,0.05466847,0.004871448,0.000541272,0.2806495,3695,8,T8,1.155789774,P013 +ATGTGTGCAATCGGTT.01_YSS020_T_5,2.077769983,1,T,breast,R,Pre_treatment,Chemo,1,1525,0.039137132,0.01633282,0.000616333,0.13898306,3245,3,T3,2.077769983,P020 +ATAACGCCATTAACCG.02_HFR012_T_5,1.208190386,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,962,0.03801901,0.016008005,0.00050025,0.14657329,1999,0,T0,1.208190386,P012 +GGACGTCTCAGGATCT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,800,0.060266294,0.005606167,0.005606167,0.19131044,1427,1,T1,0.0,P022 +GGCGACTAGAATTCCC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,987,0.041476984,0.017197775,0.001011634,0.23166414,1977,5,T5,0.0,P022 +CGTTAGACATATGGTC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,727,0.0723589,0.005065123,0.002894356,0.25325614,1382,3,T3,0.0,P019 +AGACGTTCATTGCGGC.01_YSS020_T_5,2.340607989,1,T,breast,R,Pre_treatment,Chemo,1,1216,0.04710821,0.05130597,0.000932836,0.013992538,2144,3,T3,2.340607989,P020 +GGGCACTTCGTGGGAA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1280,0.030924937,0.032892887,0.0,0.26736012,3557,8,T8,0.0,P013 +GCGGGTTTCGGATGTT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,566,0.028106509,0.005177515,0.0,0.44230768,1352,1,T1,0.0,P007 +CAACCAATCGATCCCT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1089,0.045577615,0.011281588,0.001805054,0.19629964,2216,12,T12,0.0,P018 +TCTATTGAGTGTACCT.02_HFR012_T_5,1.526951537,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,715,0.040960453,0.041666668,0.001412429,0.19491525,1416,3,T3,1.526951537,P012 +CGTTGGGAGCGTCTAT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,473,0.06366048,0.03846154,0.00397878,0.19098143,754,3,T3,0.0,P019 +AGATTGCGTGGAAAGA.02_LCL002_T_5,0.350027365,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,3913,0.02628197,0.018763656,6.43e-05,0.18037528,15562,5,T5,0.350027365,P002 +CTGTGCTAGTCGCCGT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1596,0.035788383,0.020228216,0.000518672,0.21058092,3856,6,T6,0.0,P002 +AGGTCCGTCACCACCT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,826,0.050317798,0.054025423,0.000529661,0.25052965,1888,12,T12,0.0,P018 +TGACGGCCATACGCCG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,821,0.02667628,0.008651766,0.000720981,0.1888969,1387,3,T3,0.0,P020 +TTCGGTCAGTCCCACG.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1268,0.044753086,0.019444445,0.0,0.30462962,3240,8,T8,0.0,P013 +GTGTTAGAGGACAGCT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1143,0.03586351,0.013579387,0.0,0.2733287,2872,3,T3,0.0,P012 +CGCGTTTTCAAAGTAG.02_XLJ019_T_5,1.69483651,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1758,0.05363498,0.03380783,0.000762583,0.20335536,3934,7,T7,1.69483651,P019 +TCGCGAGCAAGTCTAC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,962,0.059517425,0.06809651,0.0,0.08847185,1865,2,T2,0.0,P013 +GAGGTGAAGGACATTA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1340,0.027631171,0.021111457,0.000310463,0.22229122,3221,2,T2,0.0,P018 +AAAGATGTCAAACAAG.02_ZJ005_T_5,1.446215672,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1135,0.042424243,0.006060606,0.0,0.33141947,3135,2,T2,1.446215672,P005 +ACTTTCACATGGATGG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,943,0.031588875,0.014615747,0.003771806,0.252711,2121,0,T0,0.0,P022 +CAGAGAGGTTTACTCT.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1186,0.063094206,0.009795448,0.0,0.36300778,3471,8,T8,0.0,P005 +CTGCTGTAGCCTCGTG.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,843,0.04764483,0.013535463,0.0,0.27016783,1847,2,T2,0.0,P001 +TCACGAACAGACAAGC.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,516,0.022203244,0.004269855,0.0,0.42698547,1171,1,T1,0.0,P007 +CCTTTCTAGCTATGCT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,738,0.030761473,0.003530005,0.0,0.4528492,1983,1,T1,0.0,P007 +ACTGAACAGCGTGTCC.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,752,0.020594966,0.008009153,0.0,0.36613274,1748,0,T0,0.0,P004 +TTTACTGCAGTGGGAT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,469,0.024655547,0.001450326,0.0,0.55620015,1379,1,T1,0.0,P007 +CATGACAGTGACGGTA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,759,0.000603136,0.006031363,0.001206273,0.36610374,1658,5,T5,0.0,P012 +GATGCTACACTAGTAC.02_WYP025_T_5,2.368313192,2,T,breast,NR,Post_treatment,Chemo,1,1809,0.025566107,0.01120039,0.00146092,0.21865109,4107,7,T7,2.368313192,P025 +CGCGTTTTCCTTGGTC.01_XLJ019_T_5,0.569616092,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,2108,0.021494966,0.022850504,0.000774593,0.16886134,5164,7,T7,0.569616092,P019 +ATCCGAATCGATAGAA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1117,0.029785544,0.053216837,0.003971406,0.21803018,2518,7,T7,0.0,P019 +CTCTACGTCCCTCTTT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,971,0.0385,0.014,0.002,0.264,2000,1,T1,0.0,P022 +TTCTTAGTCACCTTAT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,818,0.027884616,0.003365385,0.0,0.37980768,2080,1,T1,0.0,P007 +TTTCCTCAGGTCATCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1128,0.03545832,0.041870993,0.001131648,0.26254243,2651,1,T1,0.0,P025 +AATCCAGAGGTTCCTA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1842,0.044744506,0.004500927,0.0,0.19777602,3777,7,T7,0.0,P023 +TGGGAAGCACATTTCT.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,446,0.023307437,0.004439512,0.0,0.40288568,901,8,T8,0.0,P018 +CTCTGGTTCATGTCCC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,952,0.037967913,0.011764706,0.003208556,0.21283422,1870,0,T0,0.0,P019 +CCACGGACATTCACTT.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1839,0.045640834,0.007265276,0.000186289,0.33997765,5368,1,T1,0.0,P019 +GTGTTAGTCGGTTAAC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,844,0.040446304,0.030683404,0.0004649,0.29753602,2151,1,T1,0.0,P012 +AACTCCCCAGTGAGTG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1342,0.036284015,0.005943072,0.001251173,0.2962152,3197,6,T6,0.0,P002 +GAACCTACAGCGTTCG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1288,0.05010395,0.015384615,0.0,0.35446987,4810,8,T8,0.0,P013 +TTAACTCAGAATTCCC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,759,0.042633228,0.011912226,0.0,0.24326019,1595,0,T0,0.0,P001 +CTACCCAGTACATCCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1571,0.028756477,0.038601037,0.001295337,0.21761657,3860,2,T2,0.0,P025 +TATCAGGAGACTTGAA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1416,0.041615367,0.07682837,0.0,0.20684561,4061,0,T0,0.0,P023 +TTCGGTCTCATTTGGG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1432,0.021711769,0.011013215,0.001573317,0.2117684,3178,4,T4,0.0,P018 +TTCTACACAAGTCATC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1470,0.007735793,0.055340674,0.000595061,0.16245165,3361,12,T12,0.0,P002 +CAGCAGCCAGCTTAAC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,599,0.014416776,0.0,0.001310616,0.036697246,763,4,T4,0.0,P002 +CTAACTTCAGACGCCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,953,0.098410755,0.003056235,0.003667482,0.13080685,1636,7,T7,0.0,P025 +ACTGATGTCACGGTTA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1026,0.04832215,0.023713646,0.0,0.18970917,2235,0,T0,0.0,P012 +CAAGTTGTCGTACGGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1176,0.028383173,0.04054739,0.010136847,0.07704004,1973,4,T4,0.0,P025 +CAACCTCGTATGCTTG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2482,0.04701931,0.09756507,0.004869857,0.045004196,5955,4,T4,0.0,P025 +GTTACAGTCACCACCT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1631,0.028993588,0.006690828,0.000278785,0.14608307,3587,3,T3,0.0,P020 +GCGAGAACACATTCGA.02_WYP025_T_5,1.709367605,2,T,breast,NR,Post_treatment,Chemo,1,1826,0.04197901,0.02655815,0.001070893,0.18869136,4669,3,T3,1.709367605,P025 +AACTCAGGTCATGCAT.01_XLJ019_T_5,0.628573218,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1804,0.03250189,0.007558579,0.000944822,0.3414588,5292,4,T4,0.628573218,P019 +TTAGTTCAGCATGGCA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1334,0.046338964,0.00640041,0.001536098,0.37096775,3906,1,T1,0.0,P019 +CCGTTCACAGATCGGA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,466,0.042895444,0.006255585,0.0,0.4530831,1119,1,T1,0.0,P007 +CTAAGACGTCTTCGTC.03_LBH013_T_5,1.900352415,3,T,liver,R,Progression,Chemo,1,1131,0.03814935,0.022727273,0.0,0.21672077,2464,11,T11,1.900352415,P013 +GTTAAGCAGCGACGTA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1471,0.029324936,0.031489864,0.0,0.3263137,5081,2,T2,0.0,P023 +CGGACTGCATTAGCCA.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,464,0.03245436,0.007099391,0.0,0.39249492,986,8,T8,0.0,P016 +TACTCGCAGATGTTAG.02_LLY018_T_5,1.960475192,2,T,breast,NR,Post_treatment,Chemo,1,946,0.046500243,0.012236906,0.001468429,0.24865393,2043,6,T6,1.960475192,P018 +GGCCGATCACGCATCG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,481,0.031687547,0.001473839,0.0,0.5696389,1357,1,T1,0.0,P007 +ATCATCTGTTCCACTC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1341,0.03364486,0.062429905,0.000373832,0.081869155,2675,11,T11,0.0,P013 +TAAACCGTCTGTCTAT.01_YSS020_T_5,3.391605361,1,T,breast,R,Pre_treatment,Chemo,1,1147,0.050655812,0.038896427,0.0,0.13161466,2211,3,T3,3.391605361,P020 +AACTCAGTCCGCTGTT.02_HFR012_T_5,1.595879447,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,601,0.07388664,0.051619433,0.002024292,0.025303643,988,3,T3,1.595879447,P012 +TTAGGCAAGATTACCC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1097,0.05315162,0.013969336,0.002725724,0.2722317,2935,0,T0,0.0,P022 +TAGCCGGGTGCGGTAA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,808,0.04261796,0.005327245,0.00304414,0.35083714,2628,1,T1,0.0,P019 +CACCACTCAATTGCTG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1023,0.050466496,0.010178117,0.002544529,0.23409669,2358,0,T0,0.0,P025 +GGACAGACATTCGACA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,664,0.038431976,0.03228286,0.001537279,0.21675634,1301,0,T0,0.0,P019 +TACTCGCTCTGCAAGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,810,0.03280182,0.002277904,0.001366743,0.41366744,2195,1,T1,0.0,P019 +GTTAAGCAGGGATGGG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,844,0.032590758,0.018976897,0.0,0.39851484,2424,1,T1,0.0,P012 +GTGCATAAGCCCTAAT.02_LLY018_T_5,1.784719285,2,T,breast,NR,Post_treatment,Chemo,1,1046,0.030950626,0.002210759,0.0,0.055268977,1357,3,T3,1.784719285,P018 +GGATTACTCATGGTCA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2160,0.027924294,0.028234564,0.002637294,0.2998759,6446,4,T4,0.0,P025 +GCAGTTATCTGAAAGA.01_XLJ019_T_5,0.987841921,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1310,0.054931335,0.030898876,0.001248439,0.2340824,3204,3,T3,0.987841921,P019 +TTCTCAATCACCACCT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1212,0.012388695,0.026713124,0.000387147,0.1606659,2583,5,T5,0.0,P020 +GGACGTCAGTATCGAA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,772,0.020381328,0.019066405,0.0,0.32610124,1521,7,T7,0.0,P007 +GGTATTGCATCGGAAG.02_XLJ019_T_5,1.450015529,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1188,0.057919014,0.009738595,0.000512558,0.079446435,1951,3,T3,1.450015529,P019 +GGAGCAATCTCTTATG.02_HLH023_T_5,1.443645183,2,T,breast,NR,Post_treatment,Chemo,1,1372,0.04734982,0.012956419,0.0,0.34982333,4245,2,T2,1.443645183,P023 +TCGCGTTGTAGTACCT.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1338,0.032786883,0.013831968,0.0,0.32786885,3904,1,T1,0.0,P013 +CAGTCCTAGTATCTCG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,2159,0.025115563,0.031124808,0.0,0.28659475,6490,2,T2,0.0,P023 +GACGCGTTCAAGGTAA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1939,0.02494331,0.021645023,0.000412286,0.19336219,4851,6,T6,0.0,P002 +CTGATCCTCCTTGACC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1264,0.05209884,0.004763322,0.0,0.32003573,3359,8,T8,0.0,P013 +TTCGAAGGTTTAGCTG.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,747,0.06366048,0.00331565,0.00198939,0.27586207,1508,0,T0,0.0,P012 +ACGGCCAGTCGATTGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2743,0.014865542,0.037915483,0.002672457,0.07917154,5987,4,T4,0.0,P025 +TCATTACAGGTGGGTT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,958,0.087576374,0.03411405,0.001527495,0.18075356,1964,0,T0,0.0,P012 +CGCTTCAAGTGTCCAT.02_XLJ019_T_5,1.80437236,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1109,0.05958132,0.056763284,0.00120773,0.15257649,2484,0,T0,1.80437236,P019 +TATTACCCAGGTCGTC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1079,0.058323678,0.037079953,0.001931248,0.18539977,2589,3,T3,0.0,P019 +ATTATCCCAGTCGATT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,501,0.040456433,0.014522822,0.0,0.36721992,964,2,T2,0.0,P001 +CTCGGGAAGACCTTTG.02_HLH023_T_5,1.941966997,2,T,breast,NR,Post_treatment,Chemo,1,1397,0.027205694,0.032290872,0.000508518,0.22222222,3933,7,T7,1.941966997,P023 +CTGCCTATCTATCCCG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,2760,0.026613029,0.011449792,0.000309454,0.104595385,6463,5,T5,0.0,P020 +GCGGGTTTCGCGTAGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,535,0.047715735,0.012182741,0.003045685,0.21421319,985,12,T12,0.0,P019 +CTTTGCGCAGATGAGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,932,0.051819865,0.041949414,0.006785935,0.059222702,1621,4,T4,0.0,P025 +CTAATGGCATTCGACA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,683,0.052841477,0.032901295,0.002991027,0.08773679,1003,1,T1,0.0,P012 +CGTCACTAGTATCGAA.01_YSS020_T_5,1.418369131,1,T,breast,R,Pre_treatment,Chemo,1,1532,0.028705148,0.026209049,0.00124805,0.14914197,3205,3,T3,1.418369131,P020 +AGGGAGTCACCATCCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,612,0.0251938,0.029069768,0.0,0.17829457,1032,0,T0,0.0,P025 +AGTAGTCAGATGAGAG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1199,0.031874664,0.005132361,0.0,0.39032954,3702,1,T1,0.0,P019 +CTTACCGCAGACACTT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1123,0.02592726,0.005041412,0.002520706,0.2574721,2777,0,T0,0.0,P025 +CAAGTTGCACTGAAGG.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1137,0.07735782,0.026845638,0.002472624,0.2500883,2831,6,T6,0.0,P022 +AGTGGGATCGTTACGA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1073,0.048742138,0.039308175,0.000314465,0.3301887,3180,11,T11,0.0,P013 +ACCAGTACAATGTTGC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,955,0.024462253,0.021509912,0.0,0.29143822,2371,2,T2,0.0,P005 +TCGTACCAGGAATCGC.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,768,0.048812665,0.001978892,0.003298153,0.29815304,1516,4,T4,0.0,P022 +TACGGTAGTTCTCATT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1334,0.07548225,0.07492312,0.0,0.20575902,3577,6,T6,0.0,P018 +ATGAGGGGTTATGCGT.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1409,0.087830454,0.004369674,0.0,0.322045,4577,8,T8,0.0,P005 +CGATGGCGTCGCTTCT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,920,0.06490385,0.03846154,0.000600962,0.1484375,1664,2,T2,0.0,P002 +TGACAACTCTGCCCTA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,714,0.0910556,0.05479452,0.0,0.034649476,1241,0,T0,0.0,P025 +TCATTACAGCATGGCA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1331,0.049140047,0.008599509,0.0,0.20792383,3256,8,T8,0.0,P013 +CTGATAGAGCCGGTAA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1129,0.04780745,0.040883612,0.0,0.27563468,3033,1,T1,0.0,P023 +ATGAGGGAGGCCATAG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1873,0.029989384,0.019639065,0.000265393,0.11518047,3768,5,T5,0.0,P020 +CGTTAGATCTTGAGGT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,535,0.030548068,0.001796945,0.000898473,0.41509435,1113,1,T1,0.0,P012 +AAACCTGTCCCAAGAT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,893,0.07596109,0.002315887,0.0,0.3770264,2159,1,T1,0.0,P023 +AGAGTGGCACACCGCA.02_WYP025_T_5,0.765572063,2,T,breast,NR,Post_treatment,Chemo,1,1919,0.020463562,0.02025475,0.0,0.17707245,4789,5,T5,0.765572063,P025 +CGCGTTTTCGGGAGTA.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,938,0.0920354,0.030088495,0.0,0.22345133,2260,1,T1,0.0,P004 +CCTCTGAAGAGCTGGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1433,0.032666393,0.038383015,0.003674969,0.07064108,2449,4,T4,0.0,P025 +CGAGCACAGTTAGGTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1083,0.01786778,0.029779632,0.002977963,0.055390112,1679,4,T4,0.0,P025 +CGGACTGGTGATGTGG.01_YSS020_T_5,1.743347984,1,T,breast,R,Pre_treatment,Chemo,1,1955,0.03283302,0.008677298,0.001172608,0.15079737,4264,3,T3,1.743347984,P020 +CCCAGTTAGATGCGAC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1111,0.06278714,0.015696784,0.0,0.25765696,2612,6,T6,0.0,P019 +GCAAACTGTGTTCTTT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,650,0.017869906,0.002144389,0.002144389,0.38098642,1399,0,T0,0.0,P012 +GCTCCTACATTGGCGC.02_LCL002_T_5,2.239223197,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,3119,0.06672084,0.007557903,0.000406339,0.26021942,12305,6,T6,2.239223197,P002 +CAAGAAACAACACCCG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1484,0.034015283,0.008380577,0.0,0.31649002,4057,0,T0,0.0,P012 +ACATGGTCAATGTAAG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1374,0.032796,0.07726515,0.003891051,0.20511395,3598,0,T0,0.0,P025 +TGGACGCTCAGCTCGG.01_HLH023_T_5,3.04710548,1,T,breast,NR,Pre_treatment,Chemo,1,1266,0.038474187,0.004932588,0.0,0.2357777,3041,0,T0,3.04710548,P023 +ACCAGTAAGAGTGAGA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1586,0.0253614,0.028658383,0.000253614,0.21227492,3943,0,T0,0.0,P013 +CACACCTGTCAGGACA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,3256,0.025794564,0.027452787,0.0,0.1547674,10855,5,T5,0.0,P013 +GGGAGATGTCCAGTGC.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1182,0.028373955,0.012368134,0.0,0.1844307,2749,11,T11,0.0,P016 +GACGCGTAGGGATACC.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,420,0.020910209,0.006150062,0.0,0.41574416,813,1,T1,0.0,P018 +GTGAAGGGTATATCCG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1445,0.08121432,0.018162947,0.000259471,0.20939285,3854,8,T8,0.0,P005 +CATCGAATCCAGAGGA.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1338,0.07857757,0.010037282,0.0,0.15916261,3487,11,T11,0.0,P005 +TCGCGTTCATTTCAGG.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,569,0.039917413,0.001376463,0.001376463,0.44184446,1453,6,T6,0.0,P012 +CTTGGCTTCCGAGCCA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,772,0.01925321,0.008168028,0.0,0.36989498,1714,1,T1,0.0,P007 +GCGCGATAGCTATGCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1031,0.03543454,0.01380082,0.001491981,0.29765013,2681,1,T1,0.0,P025 +CATCAGACAGCCTTGG.01_XLJ019_T_5,1.75995538,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,720,0.041347627,0.034456354,0.003062787,0.13705972,1306,3,T3,1.75995538,P019 +TATCTCAAGGACGAAA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1352,0.070360824,0.012113402,0.0,0.3530928,3880,0,T0,0.0,P023 +TGTGGTAAGGCATGGT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,948,0.03170163,0.073193476,0.0004662,0.19393939,2145,5,T5,0.0,P012 +GTTCTCGGTAAGTTCC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,626,0.024105754,0.002332815,0.000777605,0.38724726,1286,1,T1,0.0,P012 +GCGAGAATCAGTCCCT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,736,0.036036037,0.001501502,0.000750751,0.23048048,1332,3,T3,0.0,P012 +GTCACAACAGCCTTTC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,2005,0.02215817,0.031165555,0.000540443,0.23257071,5551,6,T6,0.0,P019 +CCTCAGTGTTGGTAAA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,413,0.04090909,0.026136363,0.0,0.3693182,880,1,T1,0.0,P001 +GGCTCGAGTTCCACGG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,749,0.06818182,0.04195804,0.01048951,0.049825177,1144,4,T4,0.0,P025 +TTGGAACTCGTAGGTT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1808,0.0345094,0.01364924,0.000772599,0.1388102,3883,5,T5,0.0,P002 +CATCAAGGTACCGAGA.02_WYP025_T_5,2.017076677,2,T,breast,NR,Post_treatment,Chemo,1,1091,0.028348397,0.025061628,0.000821693,0.24445358,2434,7,T7,2.017076677,P025 +CCATGTCGTACGCACC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,810,0.039384615,0.026461538,0.002461538,0.24246153,1625,0,T0,0.0,P019 +GCCAAATCATTCCTCG.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,621,0.024252223,0.06628941,0.0,0.15844786,1237,2,T2,0.0,P016 +TAGAGCTCATAGAAAC.01_HFR012_T_5,0.843939881,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1958,0.030159766,0.009129442,0.000163026,0.33012715,6134,12,T12,0.843939881,P012 +TGAGCCGCACTAAGTC.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,434,0.042735044,0.032967035,0.0,0.2857143,819,1,T1,0.0,P018 +GTAGGCCCAGCCAGAA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,846,0.050887574,0.010059171,0.0,0.20710059,1690,0,T0,0.0,P012 +CAGATCAAGAGTGAGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1381,0.05395769,0.011171857,0.001188495,0.39244118,4207,1,T1,0.0,P019 +TCCCGATTCCGGGTGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,984,0.03666954,0.061259706,0.005608283,0.19197585,2318,6,T6,0.0,P019 +CTGCGGATCTCTTATG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1783,0.0382134,0.068486355,0.003722085,0.07667494,4030,4,T4,0.0,P025 +CATATGGAGCACACAG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,844,0.013202934,0.004400978,0.004889976,0.40929094,2045,1,T1,0.0,P022 +ACATGGTCACGGTTTA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1006,0.042276423,0.022764228,0.000813008,0.24471545,2460,1,T1,0.0,P025 +CAGTCCTCACGAAGCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1126,0.014931397,0.02582728,0.00322841,0.20500404,2478,0,T0,0.0,P025 +ACGGGTCTCCCAAGAT.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,922,0.056791104,0.06989674,0.000397141,0.20452741,2518,2,T2,0.0,P019 +GGTGAAGCAGCTCGCA.01_WYP025_T_5,3.090968332,1,T,breast,NR,Pre_treatment,Chemo,1,879,0.0774983,0.017675051,0.008837526,0.05778382,1471,4,T4,3.090968332,P025 +GATCAGTAGGTGATTA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1198,0.05771812,0.051901568,0.000447427,0.040715884,2235,3,T3,0.0,P019 +AATCGGTAGGATGCGT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1195,0.015241321,0.042054757,0.0,0.278013,3543,2,T2,0.0,P023 +ACGAGGAGTCGAACAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,995,0.026083468,0.025682183,0.001605136,0.25642055,2492,0,T0,0.0,P025 +TTAGGACTCGAGCCCA.02_LCL002_T_5,1.082825609,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1655,0.016970944,0.010028285,0.006942659,0.27616355,3889,12,T12,1.082825609,P002 +AAACGGGGTAGGCATG.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1120,0.04464286,0.00974026,0.001623377,0.22362013,2464,6,T6,0.0,P022 +CTACACCTCTGCGACG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,701,0.0911983,0.004772004,0.002120891,0.34199363,1886,7,T7,0.0,P019 +TCAGGTACACTTCTGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,577,0.044701986,0.033940397,0.001655629,0.25165564,1208,0,T0,0.0,P019 +AAGCCGCCATCCCATC.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,914,0.032770097,0.002560164,0.000512033,0.2923707,1953,1,T1,0.0,P018 +AGTTGGTCATTAACCG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,420,0.031438936,0.010882708,0.0,0.40991536,827,1,T1,0.0,P007 +ACGGCCATCACTTATC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1274,0.038029924,0.024937656,0.0,0.18422693,3208,0,T0,0.0,P005 +GGGAATGAGAAGGCCT.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1134,0.047826085,0.003043478,0.002173913,0.2778261,2300,0,T0,0.0,P022 +ATGCGATTCAACTCTT.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1581,0.028863346,0.010472542,0.000255428,0.28761175,3915,4,T4,0.0,P019 +GCCTCTATCCGCAGTG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,631,0.05186591,0.023402909,0.000632511,0.32321316,1581,1,T1,0.0,P012 +GCATACAGTTTGACTG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1360,0.00851735,0.008832808,0.000946372,0.22050473,3170,0,T0,0.0,P002 +GTGCGGTGTACTCAAC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,694,0.024746906,0.002249719,0.010123734,0.08548931,889,4,T4,0.0,P022 +GAATAAGAGAGCTGGT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,766,0.03652968,0.00456621,0.000570776,0.3635845,1752,1,T1,0.0,P012 +GGACATTTCGTAGGAG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1710,0.043420173,0.014028057,0.000222668,0.32153195,4491,4,T4,0.0,P019 +TACCTTAGTAGCTAAA.02_LCL002_T_5,1.001228683,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1761,0.022761434,0.013098561,0.001503114,0.22267555,4657,6,T6,1.001228683,P002 +CTAGTGATCTTTCCTC.01_WYP025_T_5,2.074814134,1,T,breast,NR,Pre_treatment,Chemo,1,703,0.0648318,0.02324159,0.005504587,0.33394495,1635,1,T1,2.074814134,P025 +GCGCGATGTTGGTAAA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1491,0.053106472,0.03892756,0.00154679,0.13534416,3879,0,T0,0.0,P002 +TGACAACCAGGTCTCG.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,750,0.05075337,0.017446471,0.000793021,0.04520222,1261,11,T11,0.0,P013 +AGACGTTCACGTGAGA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,463,0.06767956,0.008287293,0.001381216,0.12569061,724,5,T5,0.0,P012 +ACGAGCCAGCCCGAAA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1012,0.0355663,0.015538674,0.0,0.34426796,2896,1,T1,0.0,P012 +GTGCAGCTCGAACTGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,792,0.026376147,0.015481652,0.005160551,0.28612384,1744,0,T0,0.0,P019 +CTGATCCGTCCAAGTT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1168,0.056454513,0.025889968,0.001078749,0.22977346,2781,3,T3,0.0,P019 +AAACCTGCAGGACCCT.02_XLJ019_T_5,1.824968466,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1107,0.07966177,0.02047174,0.003560303,0.20026702,2247,3,T3,1.824968466,P019 +CTGATAGGTAAGTAGT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,804,0.055687204,0.023104265,0.001777251,0.3021327,1688,2,T2,0.0,P022 +CAACCAATCGTCACGG.01_YSS020_T_5,1.787082216,1,T,breast,R,Pre_treatment,Chemo,1,1142,0.005008347,0.038397327,0.000417362,0.17946577,2396,12,T12,1.787082216,P020 +CTTGGCTCAAGCGATG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,2292,0.02359882,0.01179941,0.0,0.30417517,8814,8,T8,0.0,P013 +GCTTCCAAGTCTCAAC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1509,0.025483305,0.014938489,0.000659051,0.33787346,4552,8,T8,0.0,P013 +AAGGTTCCATCCTTGC.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1236,0.018018018,0.029696364,0.001334668,0.21921922,2997,0,T0,0.0,P018 +GACTAACAGTGTTTGC.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1552,0.044121753,0.004188774,0.000279252,0.22395979,3581,0,T0,0.0,P004 +CTCACACAGGCGCTCT.01_YSS020_T_5,2.260323674,1,T,breast,R,Pre_treatment,Chemo,1,858,0.04868421,0.011842106,0.0,0.15065789,1520,3,T3,2.260323674,P020 +AGAGCGACATATACGC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,459,0.09631391,0.024970273,0.001189061,0.060642093,841,6,T6,0.0,P013 +GCGCAACTCGCATGAT.01_ZJ005_T_5,1.123077601,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1481,0.049904488,0.008834766,0.0,0.2858166,4188,8,T8,1.123077601,P005 +GGACGTCTCGTCCAGG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1765,0.061542746,0.059593428,0.007240323,0.048732944,3591,4,T4,0.0,P025 +CGGAGTCCAAACCTAC.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,614,0.022714036,0.002329645,0.0,0.511357,1717,1,T1,0.0,P007 +TAGACCAAGCTCCTCT.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,600,0.030916844,0.025586354,0.0,0.1609808,938,5,T5,0.0,P018 +GGGTCTGGTACGCTGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1117,0.062298603,0.0349087,0.016111707,0.06283566,1862,4,T4,0.0,P025 +TGACTTTGTCCTCTTG.03_LBH013_T_5,2.179744075,3,T,liver,R,Progression,Chemo,1,985,0.05467372,0.09259259,0.0,0.15696649,2268,11,T11,2.179744075,P013 +GCGCAACGTTGAGGTG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,594,0.027442371,0.003293084,0.008781559,0.19758508,911,2,T2,0.0,P022 +GACTAACTCAGTACGT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1755,0.022544283,0.07430412,0.000690131,0.17345296,4347,5,T5,0.0,P018 +CGCGTTTTCACAACGT.02_LCL002_T_5,1.338310344,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1272,0.053840633,0.006460876,0.002153625,0.27207467,2786,7,T7,1.338310344,P002 +TTCGGTCTCTTGAGAC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,976,0.02834008,0.019664546,0.0,0.13880856,1729,0,T0,0.0,P005 +GCCTCTACAGATCTGT.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,621,0.002111189,0.003518649,0.002111189,0.4468684,1421,1,T1,0.0,P019 +CTGCGGAGTTTGACTG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,748,0.09035222,0.03598775,0.000765697,0.03828484,1306,0,T0,0.0,P002 +GTTCGGGCACTTACGA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1562,0.024174247,0.020823361,0.000957396,0.21637148,4178,2,T2,0.0,P002 +GGACAGAAGATGAGAG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1220,0.05263158,0.004385965,0.001949318,0.45760235,4104,1,T1,0.0,P022 +TCTTTCCTCAACGGCC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1520,0.026122242,0.008369262,0.0,0.24397667,3943,2,T2,0.0,P005 +GTATTCTTCAAACCGT.01_XLJ019_T_5,2.552752391,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,723,0.04015444,0.033204634,0.004633205,0.15752895,1295,3,T3,2.552752391,P019 +ATGGGAGAGCACCGCT.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1412,0.053113554,0.01831502,0.0,0.28231293,3822,2,T2,0.0,P004 +GGCTCGAGTTCTGTTT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,579,0.056475904,0.009036144,0.0,0.40286145,1328,1,T1,0.0,P007 +GCGCAGTAGTCAATAG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,808,0.031143552,0.008272506,0.0,0.40389293,2055,1,T1,0.0,P007 +TGGCTGGAGCCACGTC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,906,0.014376322,0.00422833,0.001691332,0.3678647,2365,1,T1,0.0,P019 +TAGCCGGCAGCTGCTG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,714,0.05677517,0.0340651,0.003785011,0.14307342,1321,3,T3,0.0,P019 +CCGGTAGAGTCCGGTC.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,997,0.03966765,0.001876173,0.0,0.5250603,3731,1,T1,0.0,P017 +CAGCATAAGGCAGGTT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,933,0.01520387,0.01658604,0.03593642,0.122322045,1447,4,T4,0.0,P025 +GACACGCGTATTCGTG.01_YSS020_T_5,1.507960676,1,T,breast,R,Pre_treatment,Chemo,1,2855,0.025701584,0.01486524,0.000277855,0.07140873,7198,5,T5,1.507960676,P020 +CTGCGGAGTGCAGACA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,2639,0.025591634,0.02173913,0.0,0.12465603,7268,5,T5,0.0,P013 +CACAGTACAAACTGCT.01_XLJ019_T_5,0.863404715,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1469,0.045142554,0.044614572,0.002903907,0.19297783,3788,1,T1,0.863404715,P019 +AGCTCTCAGTGGGATC.01_XLJ019_T_5,1.937783539,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1912,0.04110922,0.023838483,0.000729749,0.18122111,4111,7,T7,1.937783539,P019 +TGACAACCATAACCTG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1207,0.053931452,0.03175403,0.0,0.3092238,3968,8,T8,0.0,P013 +CAGCTGGGTGTGACCC.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,987,0.04139073,0.008278145,0.001655629,0.105960265,1812,5,T5,0.0,P016 +GGTATTGAGTGACATA.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,1219,0.031638894,0.002952964,0.000210926,0.5144484,4741,1,T1,0.0,P017 +ACACCAATCGGAAATA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1213,0.03918544,0.015118791,0.0,0.2931194,3241,8,T8,0.0,P013 +CATCCACTCAGCTCGG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2265,0.025829436,0.03651748,0.005789356,0.055444222,4491,4,T4,0.0,P025 +TAGGCATTCCATGAGT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1423,0.019163763,0.02071235,0.0,0.3786295,5166,2,T2,0.0,P023 +CAAGAAATCCACGCAG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1136,0.019742884,0.035812672,0.002754821,0.09687787,2178,3,T3,0.0,P022 +GTGCATAGTTTCCACC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,768,0.039559014,0.064850844,0.001945525,0.20298314,1542,1,T1,0.0,P019 +ATTGGTGGTAAGGGAA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1004,0.013903744,0.0342246,0.005347594,0.06898396,1870,0,T0,0.0,P022 +TCGTAGATCTCCGGTT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,775,0.059236165,0.0436477,0.007794232,0.05533905,1283,4,T4,0.0,P025 +GGTGAAGGTCTCTCGT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,561,0.05844846,0.09032944,0.005313496,0.08289054,941,1,T1,0.0,P018 +CATCGGGGTGAGTGAC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,856,0.03635527,0.025770824,0.000460193,0.35342845,2173,1,T1,0.0,P025 +GTATTCTAGCGTGTCC.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,658,0.029358897,0.01018574,0.000599161,0.39065307,1669,1,T1,0.0,P007 +TTAACTCCAGCGTTCG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,846,0.044162128,0.006654568,0.001814882,0.24863884,1653,1,T1,0.0,P022 +CTGCCTACACAGGTTT.01_YSS020_T_5,2.648399924,1,T,breast,R,Pre_treatment,Chemo,1,2092,0.01855163,0.025480554,0.000670541,0.12494412,4474,3,T3,2.648399924,P020 +GGGTCTGGTAGCGTCC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1523,0.042861044,0.004641005,0.000273,0.23860224,3663,0,T0,0.0,P019 +TTTGTCATCTGTTGAG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1450,0.048633095,0.032805756,0.0,0.243741,3475,3,T3,0.0,P019 +ATAACGCCAAGAAAGG.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1123,0.022833906,0.008758211,0.0,0.33500156,3197,2,T2,0.0,P005 +CTCAGAAGTGTTTGGT.02_LCL002_T_5,1.514195158,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1905,0.014627351,0.027861621,0.00046436,0.2015324,4307,3,T3,1.514195158,P002 +CTCGGAGAGGTGCAAC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1532,0.045078687,0.018404908,0.0,0.21979195,3749,8,T8,0.0,P005 +CCACCTATCAGTCCCT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1096,0.063600786,0.009784736,0.000326158,0.33692107,3066,0,T0,0.0,P012 +ACCTTTAGTGTGCCTG.02_HFR012_T_5,1.305885258,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,879,0.054732773,0.01159047,0.000643915,0.15196393,1553,3,T3,1.305885258,P012 +GGCTCGAAGGATTCGG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1561,0.014209115,0.03002681,0.0,0.19892761,3730,2,T2,0.0,P005 +GGTGCGTAGAGTTGGC.02_LLY018_T_5,1.870262148,2,T,breast,NR,Post_treatment,Chemo,1,963,0.030551756,0.04377565,0.000911993,0.27040583,2193,12,T12,1.870262148,P018 +TAGAGCTAGCGATAGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1485,0.034954406,0.04331307,0.00493921,0.041033436,2632,4,T4,0.0,P025 +CAGCCGATCACATGCA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,580,0.028719127,0.005743825,0.0,0.54623777,1741,1,T1,0.0,P007 +GATCAGTAGAGCCCAA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1479,0.05631579,0.026578948,0.00131579,0.22868422,3800,0,T0,0.0,P025 +GATGAAAAGCGTCTAT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,521,0.035755478,0.03690888,0.003460208,0.2295271,867,6,T6,0.0,P019 +AGCAGCCAGACAAGCC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,452,0.076177284,0.004155125,0.0,0.030470913,722,4,T4,0.0,P012 +TTTGTCATCATTATCC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1059,0.023728814,0.011864407,0.001271186,0.20720339,2360,0,T0,0.0,P025 +GTTACAGCAACCGCCA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,933,0.046984833,0.030706622,0.001109878,0.36662966,2703,1,T1,0.0,P019 +TTGCCGTGTCTCGTTC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1041,0.041771095,0.010860484,0.0,0.24060151,2394,11,T11,0.0,P013 +GCAGTTATCAGCTCGG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,879,0.087507196,0.05641911,0.0,0.06390328,1737,1,T1,0.0,P023 +TACAGTGTCGCCTGTT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1405,0.03608087,0.007153966,0.000933126,0.23670295,3215,2,T2,0.0,P002 +ATTTCTGAGTACATGA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,627,0.07893101,0.01678061,0.0,0.3666874,1609,1,T1,0.0,P013 +CCTACCACACGTCTCT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,639,0.029472241,0.007539411,0.000685401,0.40644276,1459,1,T1,0.0,P012 +TAAACCGCAATGGACG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1372,0.013594689,0.026873222,0.000632311,0.18558331,3163,5,T5,0.0,P018 +CGTCCATGTTATCCGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1266,0.031996395,0.007210455,0.000901307,0.13474537,2219,3,T3,0.0,P020 +TTTGGTTGTTACGGAG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1514,0.05170517,0.0110011,0.0,0.23294829,3636,6,T6,0.0,P019 +GCGCCAACACAGACAG.02_LLY018_T_5,1.659779973,2,T,breast,NR,Post_treatment,Chemo,1,1886,0.04494649,0.03448276,0.000713436,0.16195007,4205,5,T5,1.659779973,P018 +AGCTCCTAGCGTTCCG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,751,0.086142324,0.04344569,0.0,0.03670412,1335,0,T0,0.0,P013 +TCCCGATCATAGACTC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,981,0.023742227,0.002261165,0.000565291,0.19389486,1769,4,T4,0.0,P002 +ACGATACTCCTATTCA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,502,0.04829857,0.016465422,0.001097695,0.2151482,911,1,T1,0.0,P012 +ACGAGGACAGCGATCC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,607,0.05593804,0.04819277,0.002581756,0.22203098,1162,1,T1,0.0,P019 +CGCTATCGTGCCTTGG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1098,0.060176127,0.051369864,0.006360078,0.09393346,2044,4,T4,0.0,P002 +GTCTTCGGTGTGAAAT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1200,0.026132405,0.014808362,0.00203252,0.37078977,3444,1,T1,0.0,P022 +CAGCTGGAGTCGCCGT.01_HFR012_T_5,1.421752671,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,776,0.054054055,0.005564388,0.00317965,0.145469,1258,3,T3,1.421752671,P012 +TTTGTCAAGAAGGGTA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1655,0.0169006,0.087653965,0.000572902,0.0996849,3491,5,T5,0.0,P018 +ACATACGGTTGTGGCC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1243,0.056465667,0.011502266,0.000348554,0.18229347,2869,3,T3,0.0,P019 +CAGTCCTAGTATCTCG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1410,0.030371204,0.009748781,0.001874766,0.1616048,2667,6,T6,0.0,P020 +ATTCTACTCTCTTATG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1780,0.040972535,0.04885187,0.002026114,0.21476813,4442,5,T5,0.0,P025 +GACTAACTCAGCTTAG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1622,0.025416302,0.012927257,0.001971955,0.34224364,4564,1,T1,0.0,P019 +GGAATAAAGCGACGTA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,490,0.057038836,0.007281554,0.002427185,0.28640777,824,1,T1,0.0,P019 +CAAGAAAAGTGTACGG.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1674,0.040397763,0.010358401,0.0,0.32794696,4827,8,T8,0.0,P005 +GACGGCTTCATGGTCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1119,0.034395367,0.018102825,0.013034034,0.2686459,2762,1,T1,0.0,P025 +CTCATTAAGCAGATCG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,686,0.037631433,0.006087438,0.00166021,0.44382957,1807,1,T1,0.0,P019 +GAGTCCGAGTAGCGGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,724,0.039715473,0.037937168,0.001778305,0.2969769,1687,1,T1,0.0,P019 +GACGTGCAGACTTGAA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,701,0.02532358,0.006190208,0.0,0.47326955,1777,1,T1,0.0,P007 +AGGGTGAAGCTTTGGT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,663,0.028747434,0.002053388,0.0,0.37029433,1461,1,T1,0.0,P007 +CAGAGAGCACCAACCG.01_YSS020_T_5,2.038026181,1,T,breast,R,Pre_treatment,Chemo,1,1471,0.020687802,0.040569585,0.0,0.20069855,3722,3,T3,2.038026181,P020 +AGGTCATGTGTTCTTT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,780,0.038247567,0.014603616,0.0,0.26703754,1438,7,T7,0.0,P007 +TGGTTCCTCAGCTGGC.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,463,0.02108963,0.002636204,0.0,0.4745167,1138,1,T1,0.0,P007 +GCATGTAAGCCGCCTA.02_WYP025_T_5,1.037254283,2,T,breast,NR,Post_treatment,Chemo,1,1363,0.021293376,0.026288118,0.000788644,0.25788644,3804,1,T1,1.037254283,P025 +CGTGTCTCAGACTCGC.02_LCL002_T_5,2.425242819,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1613,0.045045044,0.005405406,0.000675676,0.24887387,4440,6,T6,2.425242819,P002 +CGAGCCAGTGATGTCT.02_XLJ019_T_5,2.096072527,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1452,0.054294176,0.024350116,0.000329056,0.17801909,3039,3,T3,2.096072527,P019 +CGATCGGGTTGTTTGG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,831,0.034222223,0.014666666,0.002222222,0.36222222,2250,1,T1,0.0,P019 +CCCAGTTCATACGCCG.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1362,0.029546758,0.002868617,0.000286862,0.3238669,3486,0,T0,0.0,P023 +GCTTCCAAGCAGCGTA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1638,0.01970166,0.023641992,0.001407262,0.1657754,3553,3,T3,0.0,P002 +AGCTCCTGTCTGCCAG.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1315,0.050675675,0.006756757,0.000281532,0.3054617,3552,2,T2,0.0,P023 +GGTGCGTTCGGCGCTA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,611,0.034839924,0.024482109,0.003766478,0.22881356,1062,0,T0,0.0,P019 +GGAACTTGTTTCGCTC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,555,0.055884287,0.005259698,0.001972387,0.4503616,1521,1,T1,0.0,P019 +ATCCACCCAAATTGCC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,536,0.04016478,0.020597322,0.005149331,0.21936148,971,1,T1,0.0,P019 +CTACCCAAGGCATGGT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1636,0.026701685,0.05230904,0.000437733,0.2394397,4569,0,T0,0.0,P023 +TAAGAGACAGACTCGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,646,0.06260032,0.024879614,0.001605136,0.19983949,1246,0,T0,0.0,P019 +GAGGTGACAGGGATTG.03_LBH013_T_5,2.946901737,3,T,liver,R,Progression,Chemo,1,1008,0.024571428,0.08514286,0.0,0.037142858,1750,5,T5,2.946901737,P013 +CGCGGTACACACCGCA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,734,0.054158606,0.023210831,0.001289491,0.2830432,1551,0,T0,0.0,P012 +CCATTCGTCCTCAATT.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,719,0.057280883,0.031055901,0.000690131,0.24637681,1449,1,T1,0.0,P016 +AGTGAGGTCGCCCTTA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,676,0.039339103,0.020456333,0.005507474,0.21715185,1271,0,T0,0.0,P019 +TTTATGCAGTGGGCTA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1037,0.026199114,0.014107215,0.000806127,0.27529222,2481,7,T7,0.0,P022 +TTTGGTTCAGGCTGAA.02_HLH023_T_5,1.280499253,2,T,breast,NR,Post_treatment,Chemo,1,1481,0.05477308,0.051196065,0.0,0.26984128,4473,0,T0,1.280499253,P023 +GACCTGGTCAAACGGG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,993,0.04389632,0.01797659,0.002508361,0.3014214,2392,6,T6,0.0,P019 +GCAGCCACAGGATCGA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1932,0.010619151,0.047516197,0.0,0.24316055,5556,8,T8,0.0,P013 +GGGAATGTCCGCTGTT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1093,0.05543155,0.012276785,0.001860119,0.27380952,2688,6,T6,0.0,P012 +GAGCAGATCTGTGCAA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,586,0.049918167,0.002454992,0.0,0.39689034,1222,1,T1,0.0,P007 +CTGGTCTCATGAACCT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,856,0.03827751,0.019138755,0.002126528,0.30728337,1881,1,T1,0.0,P018 +AACCATGCACTGCCAG.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,620,0.03268945,0.005200594,0.0,0.36478454,1346,2,T2,0.0,P001 +ATTATCCTCGTCGTTC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,698,0.007874016,0.000656168,0.005249344,0.36811024,1524,7,T7,0.0,P022 +CAAGATCTCGGAGGTA.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1046,0.055759355,0.016140865,0.000366838,0.24908291,2726,0,T0,0.0,P004 +CGTAGCGCAAAGAATC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1788,0.033260033,0.06157229,0.034359537,0.058273777,3638,4,T4,0.0,P025 +TCAACGAGTAAGTTCC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1377,0.026630249,0.012632297,0.00102424,0.21884602,2929,4,T4,0.0,P022 +CAGAGAGCATGAGCGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1000,0.047396768,0.026570916,0.001436266,0.29802513,2785,1,T1,0.0,P019 +AGGCCACGTCTGATCA.01_WYP025_T_5,0.687787916,1,T,breast,NR,Pre_treatment,Chemo,1,2247,0.019681742,0.063860975,0.002721943,0.057788946,4776,4,T4,0.687787916,P025 +TAGCCGGAGGCTACGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,979,0.038707253,0.003757986,0.003006389,0.41187525,2661,1,T1,0.0,P019 +TGCACCTCACTATCTT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1231,0.06329114,0.008763389,0.004868549,0.088607594,2054,4,T4,0.0,P002 +CTCACACCACAAGACG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,817,0.035742972,0.009638554,0.002811245,0.47028112,2490,1,T1,0.0,P019 +GTTTCTAAGGTTACCT.02_XCY022_T_5,1.605557018,2,T,breast,R,Post_treatment,Chemo,1,2151,0.05436309,0.012437312,0.001805416,0.10511535,4985,3,T3,1.605557018,P022 +CTTTGCGCATCCCACT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1119,0.063033,0.010752688,0.0,0.31405264,2697,11,T11,0.0,P013 +AAACGGGGTGCGCTTG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,811,0.051359516,0.003021148,0.001208459,0.27432024,1655,12,T12,0.0,P002 +GTGCTTCTCAGTTTGG.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,956,0.06912442,0.003225806,0.000921659,0.26589862,2170,0,T0,0.0,P022 +GCCAAATCAATGGTCT.02_LCL002_T_5,1.536112949,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1768,0.04858804,0.017649502,0.001038206,0.21200167,4816,6,T6,1.536112949,P002 +GACGGCTGTGGGTCAA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1206,0.033790402,0.018609207,0.0,0.41356513,4084,0,T0,0.0,P013 +CTCTAATAGTATGACA.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,916,0.032811712,0.033821303,0.000504796,0.20898536,1981,5,T5,0.0,P018 +CGTTGGGAGGTGATTA.01_YSS020_T_5,3.02170997,1,T,breast,R,Pre_treatment,Chemo,1,2436,0.028616352,0.027515722,0.000943396,0.10660377,6360,5,T5,3.02170997,P020 +CACATAGCATATGGTC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1916,0.024271844,0.015256588,0.000693481,0.16920944,4326,6,T6,0.0,P002 +GAACATCCACGAAGCA.03_LBH013_T_5,1.918192087,3,T,liver,R,Progression,Chemo,1,1152,0.03365004,0.05344418,0.000395883,0.18408552,2526,8,T8,1.918192087,P013 +TCTCATAAGAAGAAGC.02_LCL002_T_5,1.387728742,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1380,0.0520669,0.011991165,0.000631114,0.19185863,3169,6,T6,1.387728742,P002 +CTAGCCTCATTCGACA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,774,0.03621439,0.007242878,0.0,0.4331241,2071,2,T2,0.0,P007 +CGTTGGGGTGACTCAT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,925,0.037065342,0.003821169,0.003056936,0.4134505,2617,1,T1,0.0,P019 +AAGGCAGTCGCTTAGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,713,0.02979903,0.023562023,0.005544005,0.26888427,1443,1,T1,0.0,P019 +ACAGCCGGTATCGCAT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,816,0.0589872,0.030050084,0.002225932,0.21702838,1797,0,T0,0.0,P019 +CGGGTCACACATTCGA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,525,0.02146264,0.007154213,0.000794913,0.42527822,1258,1,T1,0.0,P012 +CAAGATCCATCGGACC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,657,0.026654411,0.03584559,0.006433824,0.109375,1088,4,T4,0.0,P002 +TGCCCTAGTAGCGCTC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,2440,0.015275421,0.04274032,0.0,0.1035334,6481,5,T5,0.0,P013 +TAAGTGCAGACAGAGA.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,734,0.038007863,0.002621232,0.000655308,0.33224115,1526,0,T0,0.0,P017 +TTTATGCTCATTATCC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1943,0.016737245,0.020568663,0.000201654,0.18350475,4959,5,T5,0.0,P025 +CAGAGAGAGTACCGGA.03_LBH013_T_5,1.304643489,3,T,liver,R,Progression,Chemo,1,1754,0.024820054,0.03127327,0.0,0.1362621,4029,8,T8,1.304643489,P013 +CACAGTACAGGATCGA.02_ZFY017_T_5,0.0,2,T,lymph_node,NR,Post_treatment,anti-PDL1+Chemo,0,406,0.026874116,0.015558699,0.0,0.31400284,707,0,T0,0.0,P017 +GCATGATAGTGGTAGC.01_HLH023_T_5,2.118169836,1,T,breast,NR,Pre_treatment,Chemo,1,1268,0.04610351,0.005353956,0.0,0.2727543,3362,12,T12,2.118169836,P023 +CAAGGCCCAAGCCCAC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1625,0.06468949,0.007563694,0.000398089,0.28125,5024,11,T11,0.0,P005 +GGGCATCAGCTAGTGG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,824,0.050167225,0.020066889,0.0,0.25585285,1794,4,T4,0.0,P023 +TTATGCTAGGGTCTCC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,614,0.05703971,0.033935018,0.0,0.21444044,1385,1,T1,0.0,P012 +GAGCAGAGTAGCGCTC.01_YSS020_T_5,1.774638788,1,T,breast,R,Pre_treatment,Chemo,1,1183,0.02172196,0.005134281,0.000394945,0.14494471,2532,3,T3,1.774638788,P020 +AAAGCAAAGACAGAGA.02_HLH023_T_5,1.33768271,2,T,breast,NR,Post_treatment,Chemo,1,1296,0.03968254,0.005866115,0.0,0.29434094,2898,1,T1,1.33768271,P023 +CGTAGCGAGGCTCATT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1225,0.027127462,0.021924935,0.0,0.20810108,2691,5,T5,0.0,P012 +GTCACAAAGGGAGTAA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1227,0.05182273,0.006790565,0.001429593,0.30271623,2798,1,T1,0.0,P019 +GCGCCAAAGGAATGGA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,765,0.04036327,0.004540868,0.0,0.43693238,1982,1,T1,0.0,P007 +CTCACACAGTATGACA.01_XLJ019_T_5,1.86570431,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1755,0.053322617,0.012325831,0.001339764,0.12245445,3732,7,T7,1.86570431,P019 +TCGTACCGTCTTCGTC.01_YSS020_T_5,3.612536064,1,T,breast,R,Pre_treatment,Chemo,1,835,0.036645964,0.005590062,0.0,0.17453416,1610,3,T3,3.612536064,P020 +TCGTAGAAGAAGGACA.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,1270,0.03199086,0.002285061,0.0,0.32962012,3501,11,T11,0.0,P017 +TGATTTCTCCGATATG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,575,0.059052058,0.04040404,0.0,0.22299923,1287,1,T1,0.0,P012 +CACACAAGTACAGTTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1432,0.019447288,0.027891506,0.001535312,0.27789152,3908,0,T0,0.0,P025 +ACACTGAAGGACATTA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1631,0.055148136,0.024053974,0.0,0.14197712,3409,5,T5,0.0,P023 +GGAACTTAGTGCAAGC.02_LCL002_T_5,2.377015019,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1050,0.049101796,0.048502993,0.019161677,0.025748502,1670,7,T7,2.377015019,P002 +CTCGGAGTCTGCCCTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,422,0.01724138,0.020376176,0.11128527,0.2413793,638,4,T4,0.0,P025 +CTACCCAGTTCCCGAG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1303,0.026806526,0.004273505,0.001942502,0.28282827,2574,1,T1,0.0,P018 +ACTGAGTAGAGGGATA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1511,0.041543026,0.017534394,0.0,0.21715672,3707,11,T11,0.0,P013 +TCATTTGCACTATCTT.01_ZJ005_T_5,1.005201903,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1698,0.044901572,0.00951117,0.0,0.25591683,4521,8,T8,1.005201903,P005 +GGGTTGCCATGTTGAC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,629,0.042042043,0.011261261,0.0,0.31306306,1332,1,T1,0.0,P001 +CAGCTGGAGTTGTCGT.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,894,0.035393555,0.022187004,0.0,0.29054412,1893,11,T11,0.0,P013 +TGCTACCCATTCCTCG.03_LBH013_T_5,0.883010961,3,T,liver,R,Progression,Chemo,1,2507,0.03198349,0.02153727,0.000128966,0.12109879,7754,5,T5,0.883010961,P013 +GACGTTATCAACGGCC.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,948,0.021917809,0.001826484,0.000304414,0.50380516,3285,1,T1,0.0,P017 +GGCAATTCATACTACG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1009,0.020148462,0.036055144,0.00795334,0.16224815,1886,5,T5,0.0,P019 +ATCATCTAGGGATGGG.01_YSS020_T_5,1.906185337,1,T,breast,R,Pre_treatment,Chemo,1,1088,0.030333167,0.012928891,0.002486325,0.15514669,2011,3,T3,1.906185337,P020 +TTCTTAGTCATGGTCA.02_XLJ019_T_5,1.922527224,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1620,0.055689424,0.013386881,0.0,0.20053548,3735,6,T6,1.922527224,P019 +ACTGATGCAATTCCTT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1192,0.022813689,0.06425855,0.001140684,0.10570342,2630,12,T12,0.0,P018 +GAGCAGATCCTATTCA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,861,0.05668449,0.005347594,0.0,0.24278075,1870,0,T0,0.0,P012 +TGGGAAGTCACGATGT.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,817,0.07134364,0.005152596,0.000792707,0.38089576,2523,1,T1,0.0,P023 +CAGCTAATCTACTTAC.01_ZJ005_T_5,1.463155851,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1753,0.06483517,0.004578755,0.0,0.31172162,5460,2,T2,1.463155851,P005 +TTGCGTCGTAAATGAC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1031,0.055578597,0.00953961,0.0,0.3550394,2411,1,T1,0.0,P019 +ACGAGCCTCAGCTGGC.01_YSS020_T_5,3.709921786,1,T,breast,R,Pre_treatment,Chemo,1,1728,0.01521112,0.040125884,0.000524521,0.14896408,3813,7,T7,3.709921786,P020 +CTGCCTATCACAATGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,897,0.016428193,0.024377318,0.002119767,0.23211446,1887,3,T3,0.0,P019 +TACACGAGTCTAGCGC.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,570,0.036042403,0.002120141,0.0,0.48975265,1415,1,T1,0.0,P007 +CCTACACTCAGTTGAC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,2085,0.052255854,0.004140491,0.0,0.3119646,7004,1,T1,0.0,P012 +TACTTACTCCAAGTAC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1219,0.04481354,0.00908806,0.004700721,0.32403636,3191,5,T5,0.0,P025 +ACTTACTCATGCAACT.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,3131,0.044496283,0.017539313,8.64e-05,0.13055123,11574,5,T5,0.0,P013 +AGGGTGAAGCTGGAAC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1052,0.049205735,0.044168927,0.0,0.22588144,2581,0,T0,0.0,P013 +AAACCTGGTAAACACA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,939,0.030190678,0.009533898,0.0,0.21186441,1888,0,T0,0.0,P013 +GTGCAGCAGTACACCT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,713,0.030823648,0.05861546,0.001010611,0.11773623,1979,0,T0,0.0,P019 +AGTCTTTTCGTGTAGT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,803,0.0402169,0.010845006,0.0,0.43380028,2213,2,T2,0.0,P023 +TGGCTGGCATCCGTGG.02_WYP025_T_5,2.228250467,2,T,breast,NR,Post_treatment,Chemo,1,1938,0.021575253,0.030153366,0.0,0.11437484,3847,7,T7,2.228250467,P025 +CAGAATCAGATCACGG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,446,0.024120603,0.005025126,0.0,0.48241207,995,1,T1,0.0,P007 +TTCGAAGAGCGCTTAT.02_WYP025_T_5,1.321639423,2,T,breast,NR,Post_treatment,Chemo,1,1068,0.030781694,0.005670312,0.000810045,0.29890645,2469,1,T1,1.321639423,P025 +TGCCAAAAGAGTACAT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1378,0.047876257,0.005646943,0.006874539,0.3339062,4073,1,T1,0.0,P025 +TGACTTTCAGCCTGTG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,2099,0.04879483,0.009798158,0.000195963,0.21791103,5103,4,T4,0.0,P005 +CGTTAGAAGAAGGCCT.02_LLY018_T_5,2.742992149,2,T,breast,NR,Post_treatment,Chemo,1,1592,0.025092445,0.042789225,0.0,0.20206022,3786,3,T3,2.742992149,P018 +AGGCCGTGTATTACCG.01_XLJ019_T_5,1.17435204,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1038,0.04138595,0.024061598,0.000962464,0.2170356,2078,7,T7,1.17435204,P019 +CTGCTGTAGCTGTTCA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,958,0.03508772,0.10016978,0.003395586,0.024900962,1767,5,T5,0.0,P022 +AGCTTGACATCTCCCA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,591,0.04753029,0.035414726,0.007455732,0.18359739,1073,11,T11,0.0,P025 +AGTGTCAAGATATGCA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,745,0.03267974,0.019607844,0.0,0.15976761,1377,6,T6,0.0,P001 +GTGCAGCGTCTAGCGC.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1401,0.0319206,0.005633047,0.00026824,0.2805794,3728,7,T7,0.0,P022 +AGTGGGACATTGGGCC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1291,0.053281352,0.00877193,0.000649773,0.31351528,3078,2,T2,0.0,P019 +TAAGTGCTCTTGTTTG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1142,0.045069166,0.008478357,0.000446229,0.13877733,2241,5,T5,0.0,P020 +GCAATCACATTAGGCT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,632,0.055268977,0.011053795,0.0,0.3448784,1357,2,T2,0.0,P007 +CACCACTGTAACGCGA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,665,0.05965909,0.055397727,0.0,0.25142047,1408,1,T1,0.0,P001 +CGGACTGCAGACGCCT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1433,0.04100172,0.041983794,0.000736558,0.25534004,4073,2,T2,0.0,P002 +GTGCATATCAGGCGAA.02_LLY018_T_5,4.055960763,2,T,breast,NR,Post_treatment,Chemo,1,1328,0.014946619,0.07829182,0.000355872,0.14163701,2810,7,T7,4.055960763,P018 +ATCGAGTTCATACGGT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1463,0.019170169,0.043067228,0.00105042,0.21953781,3808,0,T0,0.0,P022 +CTGATCCGTATTAGCC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1215,0.012638835,0.004978935,0.000382995,0.306396,2611,4,T4,0.0,P012 +GTTACAGTCGTCGTTC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,907,0.06712735,0.005429417,0.0,0.25715697,2026,11,T11,0.0,P013 +CGTAGCGTCATCTGTT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1569,0.03960987,0.031449046,0.0,0.23507166,5024,12,T12,0.0,P023 +AGCGTCGCACAACGTT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,624,0.03419886,0.006966434,0.000633312,0.37745407,1579,1,T1,0.0,P019 +GCGGGTTTCATACGGT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,451,0.03567681,0.022035677,0.0,0.2161595,953,5,T5,0.0,P001 +ACGATACGTCTAGCGC.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,984,0.08216169,0.011423551,0.0,0.28119507,2276,0,T0,0.0,P004 +CTACATTAGCCCGAAA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1551,0.033869762,0.03648952,0.0,0.32166916,5344,2,T2,0.0,P023 +CTCTACGGTTGCGCAC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1148,0.042375952,0.051430643,0.000724375,0.18218037,2761,0,T0,0.0,P019 +TGCGGGTTCTTAGCCC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,820,0.039479587,0.00538358,0.0,0.38088828,2229,11,T11,0.0,P013 +CCTTCCCAGTCGTACT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,519,0.02443609,0.018796992,0.0,0.25281954,1064,2,T2,0.0,P001 +GCTCCTACAGTGAGTG.01_HFR012_T_5,2.043220695,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,721,0.030704815,0.002791347,0.0,0.31472436,1433,0,T0,2.043220695,P012 +AAACCTGAGAGTCTGG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,748,0.019181585,0.003836317,0.0,0.5520034,2346,1,T1,0.0,P007 +AGTTGGTCATTCCTGC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,817,0.09160756,0.026595745,0.0,0.26241136,1692,0,T0,0.0,P001 +TATCAGGTCTTCGGTC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1135,0.023765996,0.004875076,0.0,0.3976234,3282,1,T1,0.0,P012 +CTACATTAGACTAAGT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1362,0.06086184,0.012883163,0.0,0.0888494,2251,6,T6,0.0,P018 +GAAATGACAGGCGATA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,3303,0.023868313,0.032098766,9.14e-05,0.21179698,10935,11,T11,0.0,P013 +AAATGCCCACTAAGTC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,901,0.031011969,0.019042438,0.001088139,0.25408053,1838,7,T7,0.0,P019 +TAGTGGTGTAGCTAAA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,589,0.054030877,0.002572899,0.0,0.35334477,1166,1,T1,0.0,P001 +GTACGTAGTAGCACGA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1170,0.004313001,0.017252002,0.003696858,0.0702403,1623,4,T4,0.0,P022 +AACCGCGTCGCCGTGA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1252,0.022698613,0.028499369,0.000252207,0.35460278,3965,2,T2,0.0,P023 +GGTGTTAGTGTGTGCC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1305,0.083899125,0.001939864,0.00242483,0.060620755,2062,4,T4,0.0,P002 +GTTCATTCAGCCTATA.01_XLJ019_T_5,2.43429876,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1116,0.023386747,0.030316154,0.002598528,0.21697704,2309,7,T7,2.43429876,P019 +CTCGTACGTCAACTGT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1013,0.012788982,0.003443187,0.006886375,0.23315297,2033,0,T0,0.0,P022 +CTGTTTAGTCGCTTTC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,739,0.0352,0.0112,0.0008,0.1808,1250,3,T3,0.0,P012 +TCAGCAATCCACGAAT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1056,0.044005543,0.016285516,0.0,0.3087318,2886,11,T11,0.0,P013 +TTAGTTCAGACCACGA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,633,0.03851175,0.016318537,0.0,0.36031333,1532,1,T1,0.0,P001 +CCACTACGTATGGTTC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,3140,0.060387675,0.037690524,0.0,0.24842611,12072,5,T5,0.0,P013 +TCAGGATCATCGGTTA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1267,0.038618438,0.012238238,0.001359804,0.3584444,3677,1,T1,0.0,P019 +ATGCGATCAGCATACT.02_LLY018_T_5,2.285947584,2,T,breast,NR,Post_treatment,Chemo,1,1207,0.025599482,0.045690212,0.002268309,0.2838626,3086,1,T1,2.285947584,P018 +CAACTAGCAATGAAAC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1159,0.052883178,0.004182851,0.002091425,0.31371376,3347,1,T1,0.0,P022 +CATCCACAGTAACCCT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1420,0.033497095,0.019428317,0.00111657,0.3528361,4478,1,T1,0.0,P019 +CTCACACAGCTATGCT.01_XLJ019_T_5,1.663403542,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,716,0.07037359,0.029539531,0.010425717,0.13900955,1151,7,T7,1.663403542,P019 +GGAAAGCGTAAGAGGA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1103,0.022118744,0.008537059,0.001164144,0.2991851,2577,11,T11,0.0,P025 +CAAGAAACATTCTCAT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,618,0.053503186,0.02866242,0.0,0.34713376,1570,1,T1,0.0,P001 +CTACCCATCAAGAAGT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,554,0.042132415,0.003439381,0.0,0.3576956,1163,1,T1,0.0,P007 +CTCGTACTCGGTCTAA.02_XLJ019_T_5,3.732928151,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,2301,0.058098953,0.018066106,0.000205297,0.08766167,4871,7,T7,3.732928151,P019 +CGTTGGGCACATGACT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,986,0.06886076,0.023291139,0.0,0.1392405,1975,3,T3,0.0,P012 +GGTGCGTAGCGTCTAT.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,549,0.093873516,0.002964427,0.0,0.26778656,1012,8,T8,0.0,P005 +ATTGGTGGTCAGGACA.01_YSS020_T_5,1.371242035,1,T,breast,R,Pre_treatment,Chemo,1,1653,0.024488531,0.04215747,0.000619963,0.15964042,3226,3,T3,1.371242035,P020 +AAAGATGAGATCGGGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,683,0.03902439,0.0200542,0.001084011,0.3810298,1845,2,T2,0.0,P019 +TAGACCACAGCATGAG.01_YSS020_T_5,2.083182481,1,T,breast,R,Pre_treatment,Chemo,1,1568,0.024539877,0.008282209,0.000306748,0.15276073,3260,3,T3,2.083182481,P020 +TTTGCGCCACGGCTAC.02_LBH013_T_5,1.650667697,2,T,liver,R,Post_treatment,Chemo,1,878,0.030988686,0.008853911,0.0,0.29316282,2033,3,T3,1.650667697,P013 +CGAGCACCAAAGCAAT.02_LLY018_T_5,1.670269156,2,T,breast,NR,Post_treatment,Chemo,1,1161,0.055533674,0.00945254,0.001969279,0.24931075,2539,0,T0,1.670269156,P018 +GGACGTCCATTAGCCA.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1325,0.0607894,0.01642178,0.0,0.2451743,3471,8,T8,0.0,P005 +ATTCTACCAACGATCT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1287,0.019931102,0.0359252,0.000492126,0.3577756,4064,1,T1,0.0,P023 +ACTTACTGTAGGCATG.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1709,0.03712221,0.015440211,0.005913272,0.06668857,3044,4,T4,0.0,P022 +GATCGTACATTTCACT.01_XCY022_T_5,0.834020887,1,T,breast,R,Pre_treatment,Chemo,1,1791,0.006774118,0.027797244,0.001167951,0.17916375,4281,7,T7,0.834020887,P022 +GGGAATGCACGAGAGT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1118,0.073067635,0.030193238,0.0,0.30585748,3312,2,T2,0.0,P013 +CATGGCGCACACCGCA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,700,0.022003034,0.04248862,0.003793627,0.031107739,1318,6,T6,0.0,P002 +CTGATCCCAATCCGAT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2149,0.015933845,0.08168616,0.00383219,0.110730134,4958,4,T4,0.0,P025 +CGCTATCAGTATCGAA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,490,0.09966025,0.005662514,0.0,0.25594565,883,0,T0,0.0,P013 +CTAGTGAAGAGGTAGA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1257,0.027481966,0.011336311,0.001717623,0.26691857,2911,0,T0,0.0,P022 +CGTAGCGCAAACCTAC.02_WYP025_T_5,1.225608398,2,T,breast,NR,Post_treatment,Chemo,1,1173,0.059604906,0.030313352,0.001021798,0.26226157,2936,2,T2,1.225608398,P025 +GTATCTTCAATGACCT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1538,0.029303184,0.028380249,0.001153669,0.28957084,4334,6,T6,0.0,P025 +TGTCCCATCTAACTCT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,829,0.033523537,0.042082738,0.0021398,0.113409415,1402,5,T5,0.0,P019 +CCGTGGAGTAAACCTC.01_YSS020_T_5,2.16958014,1,T,breast,R,Pre_treatment,Chemo,1,909,0.024048096,0.01002004,0.005344022,0.17301269,1497,3,T3,2.16958014,P020 +CCTAAAGCATCAGTCA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1456,0.06421812,0.003379901,0.001126634,0.31478143,4438,2,T2,0.0,P022 +ACGAGCCCACAGCGTC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,2020,0.028377654,0.019096913,0.000892379,0.22987685,5603,5,T5,0.0,P019 +ATCTACTTCTTGAGGT.01_XCY022_T_5,1.540557637,1,T,breast,R,Pre_treatment,Chemo,1,1556,0.047298864,0.02133086,0.004173429,0.26640388,4313,12,T12,1.540557637,P022 +TTAGGCAAGTATTGGA.01_XCY022_T_5,1.176810503,1,T,breast,R,Pre_treatment,Chemo,1,2083,0.024067389,0.028880866,0.001604493,0.15403129,4986,3,T3,1.176810503,P022 +GAAGCAGCATACGCCG.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,496,0.023281597,0.007760532,0.0,0.31707317,902,0,T0,0.0,P018 +CTAGCCTTCAGCGATT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1884,0.04250822,0.06552372,0.00234852,0.0925317,4258,6,T6,0.0,P025 +CCTACCAAGGGAAACA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,656,0.033414833,0.007334963,0.000814996,0.31295845,1227,0,T0,0.0,P012 +TCGTACCCAGTCGATT.01_LCL002_T_5,1.972858205,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,3286,0.02799643,0.006897671,0.004300901,0.09681084,12323,3,T3,1.972858205,P002 +TGCGCAGGTCCATGAT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1153,0.037753224,0.006445672,0.0,0.33210558,3258,0,T0,0.0,P013 +GTTACAGTCACATACG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1306,0.031069564,0.003299423,0.000274952,0.44267252,3637,1,T1,0.0,P023 +CCTCTGACACGCATCG.02_LLY018_T_5,1.769212026,2,T,breast,NR,Post_treatment,Chemo,1,1067,0.04603899,0.009954376,0.0,0.23475736,2411,6,T6,1.769212026,P018 +GCATGTACACAACTGT.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,2276,0.038338017,0.009433962,0.000401445,0.12906463,4982,4,T4,0.0,P022 +CAGCGACCACTTGGAT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1129,0.034592304,0.031062478,0.000352983,0.28838688,2833,1,T1,0.0,P018 +GGCGTGTAGCAATCTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,769,0.043253712,0.024531957,0.001291156,0.25112975,1549,11,T11,0.0,P025 +CGTCAGGAGATGTTAG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,735,0.059336822,0.06573589,0.001745201,0.25770798,1719,1,T1,0.0,P019 +ACGCAGCTCGCGTAGC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1003,0.030163385,0.003770423,0.005027231,0.35232508,2387,1,T1,0.0,P025 +GGGAGATGTGACTCAT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1312,0.038175046,0.032588456,0.012104283,0.05586592,2148,4,T4,0.0,P025 +GAACGGAGTATAATGG.02_YSS020_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,558,0.07298578,0.008530806,0.003791469,0.3014218,1055,3,T3,0.0,P020 +CAGCTAATCTTTACAC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1420,0.050017994,0.003598417,0.0,0.22166246,2779,0,T0,0.0,P019 +CAAGGCCTCTTGAGGT.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,468,0.027722772,0.055445544,0.0,0.3980198,1010,2,T2,0.0,P018 +GTATTCTCATCAGTCA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1752,0.043406706,0.022834808,0.001028595,0.20448467,4861,11,T11,0.0,P022 +GGGCACTAGAATAGGG.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,860,0.024265645,0.011494253,0.0,0.2394636,1566,3,T3,0.0,P012 +GTCTTCGCACCAGCAC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,623,0.048543688,0.006178288,0.000882613,0.27360988,1133,5,T5,0.0,P012 +CTTAGGATCATGTCTT.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,752,0.022222223,0.004301075,0.0,0.2716846,1395,2,T2,0.0,P016 +CTCAGAATCAACACTG.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1082,0.036195286,0.016835017,0.0,0.22095959,2376,8,T8,0.0,P016 +TCTGAGACATGATCCA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1277,0.04615048,0.002843395,0.000437445,0.50174975,4572,1,T1,0.0,P022 +TTTGTCAAGGGAACGG.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1052,0.04118404,0.006864007,0.0,0.26040325,2331,11,T11,0.0,P023 +GTTCTCGTCGCCGTGA.01_XLJ019_T_5,2.33407886,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,778,0.006676558,0.007418398,0.003709199,0.22997032,1348,3,T3,2.33407886,P019 +CTAATGGGTTGTTTGG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,568,0.06910569,0.012195122,0.00101626,0.15955284,984,0,T0,0.0,P012 +ACTGATGAGATAGCAT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,850,0.040272262,0.00680658,0.00113443,0.29381737,1763,0,T0,0.0,P019 +GACACGCGTTATCCGA.02_LCL002_T_5,1.802999741,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1879,0.037171483,0.018876143,0.000145201,0.3807173,6887,1,T1,1.802999741,P002 +ATCATGGGTATCTGCA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1918,0.023043687,0.01632261,0.000960154,0.18050888,4166,4,T4,0.0,P022 +CACATTTAGGTGGGTT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,947,0.018041236,0.03041237,0.000515464,0.2371134,1940,5,T5,0.0,P012 +ATGAGGGCAGGCTGAA.02_WYP025_T_5,0.334374995,2,T,breast,NR,Post_treatment,Chemo,1,3822,0.05279299,0.012778387,0.000730194,0.14786418,13695,15,T15,0.334374995,P025 +ATCATGGTCCTTCAAT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,509,0.003062787,0.0,0.007656968,0.12557428,653,0,T0,0.0,P022 +CTCGAAATCCAGAAGG.01_LBH013_T_5,1.375544745,1,T,liver,R,Pre_treatment,Chemo,1,424,0.04491018,0.023952097,0.0,0.2709581,668,5,T5,1.375544745,P013 +CCTCAGTTCTTGGGTA.01_YSS020_T_5,1.634424929,1,T,breast,R,Pre_treatment,Chemo,1,2773,0.028025145,0.02187009,0.000392876,0.19316396,7636,7,T7,1.634424929,P020 +TGAGCCGCAAGCGAGT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,564,0.033788174,0.003248863,0.0,0.51721895,1539,1,T1,0.0,P007 +CAAGGCCCACAGACTT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,724,0.07807571,0.02681388,0.005520505,0.12776025,1268,5,T5,0.0,P019 +AGGGATGGTGGCCCTA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,987,0.058276,0.004046944,0.0,0.26426548,2471,0,T0,0.0,P013 +ACTTGTTTCGTAGGAG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1114,0.052897573,0.031334233,0.0,0.28268194,2968,0,T0,0.0,P023 +GCAATCATCAACACCA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1040,0.026548672,0.10973451,0.001327434,0.14955752,2260,0,T0,0.0,P018 +GTTCATTTCATCTGCC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1666,0.06581387,0.01594364,0.000185391,0.30385613,5394,8,T8,0.0,P005 +GTTCTCGTCCCAAGTA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1501,0.076541044,0.016944202,0.000876424,0.22115104,3423,6,T6,0.0,P019 +AAACGGGGTAGGCTGA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,721,0.022974607,0.015719468,0.0,0.30169287,1654,2,T2,0.0,P001 +GTCAAGTCAGGCAGTA.02_HLH023_T_5,1.681923824,2,T,breast,NR,Post_treatment,Chemo,1,932,0.09682081,0.020953758,0.0,0.037572253,1384,7,T7,1.681923824,P023 +AGAATAGGTTCGGGCT.02_HFR012_T_5,0.731405858,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1600,0.057135195,0.02414163,0.00026824,0.14940988,3728,3,T3,0.731405858,P012 +TTTCCTCCAACACCTA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,678,0.051170386,0.005988024,0.0,0.41752857,1837,1,T1,0.0,P012 +ACTATCTGTACGCACC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1649,0.024117354,0.002734958,0.005469916,0.24888115,4022,12,T12,0.0,P002 +GGAGCAATCTTTACAC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,2029,0.01759015,0.004837291,0.001759015,0.30167106,6822,0,T0,0.0,P025 +TAAGTGCGTGCTAGCC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1327,0.033735685,0.020736614,0.002476014,0.23707831,3231,1,T1,0.0,P002 +TTTGGTTCAAGCCGTC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1025,0.030240266,0.001657001,0.0,0.2763049,2414,0,T0,0.0,P013 +TGAAAGAAGCTAGTCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,726,0.02665706,0.004322767,0.002161383,0.33069164,1388,1,T1,0.0,P025 +CAAGTTGGTATAATGG.01_XLJ019_T_5,2.205891295,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,874,0.06580566,0.012300123,0.003690037,0.17773677,1626,3,T3,2.205891295,P019 +CACACAAAGAGATGAG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1145,0.08457711,0.01840796,0.002487562,0.119900495,2010,0,T0,0.0,P019 +CAACTAGTCGGAAACG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1484,0.03020335,0.024521532,0.000598086,0.16357656,3344,0,T0,0.0,P002 +GTTCGGGGTCATATGC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1251,0.021454912,0.038887028,0.000670466,0.22695273,2983,0,T0,0.0,P022 +TGACAACGTACCAGTT.01_ZJ005_T_5,1.027130338,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1524,0.04788052,0.006369427,0.0,0.3033165,4553,2,T2,1.027130338,P005 +CTTTGCGAGGTAGCCA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,522,0.042979944,0.006685769,0.003820439,0.37726837,1047,1,T1,0.0,P019 +ATCATCTCAAGTCATC.02_ZFY017_T_5,0.0,2,T,lymph_node,NR,Post_treatment,anti-PDL1+Chemo,0,440,0.02016129,0.017473118,0.0,0.22983871,744,0,T0,0.0,P017 +GGGAGATGTGTGGCTC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1010,0.0295858,0.012961398,0.00028177,0.44885883,3549,2,T2,0.0,P023 +CCTTACGCATCAGTCA.01_XLJ019_T_5,1.32273396,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,885,0.04226919,0.010011124,0.004449388,0.24805339,1798,7,T7,1.32273396,P019 +TCAGGTATCAGTTTGG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1511,0.044966444,0.016442953,0.000671141,0.18422818,2980,3,T3,0.0,P019 +CATCGAAGTAAGAGAG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1890,0.037063435,0.063435495,0.003563792,0.08101687,4209,4,T4,0.0,P025 +ATCATGGGTTTAGCTG.01_WX016_T_5,1.650336857,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,2702,0.047769096,0.046004537,0.0,0.13876985,7934,5,T5,1.650336857,P016 +CGATGGCGTCTAGGTT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,947,0.026987242,0.004906771,0.000981354,0.2772326,2038,0,T0,0.0,P022 +TGTTCCGCATAAAGGT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1174,0.026224451,0.004242191,0.0,0.1731585,2593,5,T5,0.0,P020 +CTACGTCAGATCCGAG.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1798,0.022416499,0.06411119,0.0,0.119704105,4461,11,T11,0.0,P013 +TCACAAGCAAATTGCC.01_WYP025_T_5,0.705569703,1,T,breast,NR,Pre_treatment,Chemo,1,2142,0.021501172,0.05179828,0.002736513,0.059225958,5116,4,T4,0.705569703,P025 +CCGGGATTCAGCATGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,826,0.054054055,0.02759009,0.000563063,0.24268018,1776,0,T0,0.0,P019 +GCACATATCACCCGAG.01_WYP025_T_5,1.482620488,1,T,breast,NR,Pre_treatment,Chemo,1,1082,0.034750614,0.04946852,0.008994277,0.22649223,2446,1,T1,1.482620488,P025 +AGATTGCGTCAATGTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1542,0.017504489,0.0244614,0.00067325,0.2933124,4456,7,T7,0.0,P025 +AGCCTAACAAGGACTG.01_DXJ007_T_5,1.473982373,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,464,0.012925969,0.021151586,0.001175088,0.31139836,851,0,T0,1.473982373,P007 +TGAGAGGGTAAGGGCT.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1513,0.045209903,0.02664155,0.0,0.26749194,3716,0,T0,0.0,P019 +CCATGTCTCTAGAGTC.01_YSS020_T_5,1.974915931,1,T,breast,R,Pre_treatment,Chemo,1,2125,0.034382284,0.014180264,0.00019425,0.13791764,5148,3,T3,1.974915931,P020 +TTGGCAATCGTCCAGG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,724,0.04383117,0.005952381,0.0,0.44642857,1848,1,T1,0.0,P007 +GTGCGGTCACAGGTTT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1151,0.050190113,0.012927757,0.000253485,0.3424588,3945,8,T8,0.0,P013 +AGGCCGTTCCCAGGTG.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,873,0.042145595,0.008757526,0.001094691,0.2703886,1827,2,T2,0.0,P012 +ATGGGAGTCCGGGTGT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1083,0.044418238,0.00668239,0.001965409,0.23309748,2544,0,T0,0.0,P012 +TAGACCAAGTTCCACA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1106,0.098407514,0.05716619,0.00081666,0.05961617,2449,1,T1,0.0,P023 +GGCGACTCAGCTCGCA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1270,0.036775973,0.003677597,0.001225866,0.360711,3263,6,T6,0.0,P019 +ACCCACTAGGGATCTG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,600,0.05882353,0.005347594,0.000891266,0.28342247,1122,0,T0,0.0,P019 +GCGCGATTCAACGGCC.02_WYP025_T_5,3.307152169,2,T,breast,NR,Post_treatment,Chemo,1,1529,0.032298762,0.036083777,0.001009336,0.19530658,3963,3,T3,3.307152169,P025 +TCACGAAAGAGACGAA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1357,0.067073174,0.005863039,0.000938086,0.331379,4264,2,T2,0.0,P019 +CCACTACTCCAGATCA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1529,0.057333704,0.004453103,0.003339828,0.28221542,3593,8,T8,0.0,P022 +TGCCAAACATTGTGCA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1176,0.05574913,0.009756098,0.002439024,0.33658537,2870,4,T4,0.0,P022 +GTAGGCCTCTTGCCGT.02_LCL002_T_5,2.416777393,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,3046,0.026812585,0.028545372,0.001094391,0.1891473,10965,5,T5,2.416777393,P002 +GTGCAGCTCCCTCAGT.02_ZFY017_T_5,0.0,2,T,lymph_node,NR,Post_treatment,anti-PDL1+Chemo,0,405,0.056287427,0.004790419,0.0,0.39401197,835,1,T1,0.0,P017 +ATAACGCTCTTGACGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1118,0.035714287,0.015997024,0.000744048,0.328125,2688,3,T3,0.0,P019 +ACAGCCGCATCACCCT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1015,0.05483208,0.022618232,0.0,0.32899246,2918,1,T1,0.0,P013 +ACGATACGTTACAGAA.02_LCL002_T_5,2.464876954,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1573,0.009015025,0.023372287,0.001669449,0.11619366,2995,5,T5,2.464876954,P002 +TTGCGTCAGTAGGCCA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,568,0.04362703,0.00855432,0.0,0.24807528,1169,0,T0,0.0,P001 +AACTCAGCACACAGAG.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1334,0.002298096,0.057124097,0.0,0.13197637,3046,0,T0,0.0,P013 +CGTCCATGTTCCATGA.01_WYP025_T_5,0.852125822,1,T,breast,NR,Pre_treatment,Chemo,1,1771,0.04111338,0.008682329,0.003319714,0.20020428,3916,4,T4,0.852125822,P025 +TCTGAGACATTTGCTT.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,683,0.0528,0.0224,0.0008,0.2112,1250,8,T8,0.0,P016 +CTTACCGGTCTAACGT.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1615,0.04829668,0.012936611,0.0,0.32104355,4638,2,T2,0.0,P004 +TACGGATGTCTTCGTC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1526,0.0410069,0.03410475,0.000203004,0.28928137,4926,2,T2,0.0,P023 +GCTGCGAGTGAGTATA.02_WYP025_T_5,1.001845075,2,T,breast,NR,Post_treatment,Chemo,1,3042,0.032184683,0.010110372,0.000505519,0.21577218,11869,3,T3,1.001845075,P025 +CCTACCACATGAGCGA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1799,0.014054384,0.022303697,0.004582951,0.09318668,3273,4,T4,0.0,P025 +ACTGAACCAGTCAGCC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,618,0.08715809,0.004172462,0.001390821,0.50764954,2157,1,T1,0.0,P022 +TCAATCTGTACCCAAT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1705,0.020545518,0.007438895,0.006376196,0.114417285,2823,4,T4,0.0,P025 +CGTCCATTCAACGAAA.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1844,0.012757386,0.006938228,0.000671441,0.17569382,4468,5,T5,0.0,P016 +TATTACCGTCCGTGAC.02_LLY018_T_5,1.68744402,2,T,breast,NR,Post_treatment,Chemo,1,1090,0.016749144,0.049105443,0.001141987,0.20098972,2627,0,T0,1.68744402,P018 +ACACCGGAGCCTATGT.02_ZFY017_T_5,0.0,2,T,lymph_node,NR,Post_treatment,anti-PDL1+Chemo,0,968,0.0186824,0.020157326,0.0,0.21583088,2034,5,T5,0.0,P017 +TGCTACCCACAGAGGT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1275,0.032309532,0.005584364,0.0,0.18348624,2507,7,T7,0.0,P020 +CTCGTACCACACAGAG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,627,0.017964073,0.002177463,0.0,0.51714754,1837,1,T1,0.0,P007 +GTGCTTCCACAAGTAA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,745,0.047879618,0.003419973,0.002051984,0.25307798,1462,3,T3,0.0,P012 +ACTGAGTTCAGTTCGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1146,0.025620496,0.008006405,0.001200961,0.21056846,2498,3,T3,0.0,P020 +GTCTTCGTCTCTTATG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1859,0.015741508,0.039491855,0.005523336,0.054404862,3621,4,T4,0.0,P025 +GCACATAAGTGGCACA.01_HFR012_T_5,1.474708808,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,631,0.011541632,0.009068426,0.001648805,0.3190437,1213,0,T0,1.474708808,P012 +CTCCTAGTCAGGATCT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,803,0.04375,0.030625,0.0,0.180625,1600,0,T0,0.0,P012 +TTTATGCCACCATGTA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1350,0.055555556,0.027607363,0.000340832,0.117246084,2934,3,T3,0.0,P012 +ATTACTCGTAGCTCCG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1108,0.047890153,0.023107836,0.0,0.26088414,2986,1,T1,0.0,P012 +CCGGGATTCACCCGAG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,663,0.03372093,0.003488372,0.0,0.44186047,1720,1,T1,0.0,P007 +AACTTTCCAGTATAAG.02_LBH013_T_5,0.817611201,2,T,liver,R,Post_treatment,Chemo,1,1821,0.05272037,0.017292282,0.0,0.19991565,4742,6,T6,0.817611201,P013 +ATTCTACGTGTGGTTT.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,904,0.048492257,0.003259984,0.0,0.41768542,2454,1,T1,0.0,P005 +TTTATGCCAAGCTGAG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,790,0.052417304,0.024936387,0.004071247,0.23969465,1965,3,T3,0.0,P022 +AGTCTTTAGCTAGGCA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,759,0.08464682,0.026269702,0.000583771,0.24810274,1713,0,T0,0.0,P019 +GTAACGTTCGCCTGAG.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1092,0.041923076,0.007307692,0.0,0.24307692,2600,0,T0,0.0,P005 +GCCTCTACATGCTAGT.02_LCL002_T_5,1.834893724,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1451,0.07034632,0.043650795,0.001082251,0.03787879,2772,4,T4,1.834893724,P002 +AACGTTGTCATTCACT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,842,0.029872674,0.029382957,0.000489716,0.31145936,2042,1,T1,0.0,P023 +CATGACACACACCGCA.02_LBH013_T_5,1.082236077,2,T,liver,R,Post_treatment,Chemo,1,1370,0.04943533,0.012784999,0.0,0.38994247,4693,2,T2,1.082236077,P013 +AGTGTCATCTTTACAC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,2287,0.014677948,0.06112934,0.0,0.12502159,5791,5,T5,0.0,P013 +TCACAAGAGGATATAC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1473,0.016146688,0.014504653,0.0,0.22550629,3654,2,T2,0.0,P005 +CACTCCAAGACGCTTT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,728,0.03128555,0.023890786,0.0,0.37599546,1758,1,T1,0.0,P001 +ATTATCCTCATGTGGT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,2888,0.03792368,0.006281109,0.0,0.12040768,8438,5,T5,0.0,P020 +TTCCCAGCACGGCCAT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1175,0.08047554,0.03292181,0.000457247,0.0260631,2187,4,T4,0.0,P002 +AGTCTTTTCGCCCTTA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,921,0.090678506,0.006341154,0.001268231,0.16106531,1577,4,T4,0.0,P019 +CACCACTAGATTACCC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1517,0.04067483,0.008088745,0.0,0.29859024,4327,8,T8,0.0,P005 +GAATAAGCATGTCCTC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1346,0.031862747,0.010348584,0.000272331,0.2780501,3672,5,T5,0.0,P022 +CTTAACTGTATTAGCC.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1678,0.012414649,0.009310987,0.000310366,0.12104283,3222,4,T4,0.0,P018 +AACTTTCGTCCGAGTC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,905,0.079283886,0.002557545,0.0,0.30605286,2346,11,T11,0.0,P013 +CGTCAGGGTTCGCTAA.02_ZFY017_T_5,0.0,2,T,lymph_node,NR,Post_treatment,anti-PDL1+Chemo,0,401,0.03668639,0.007100592,0.0,0.37159765,845,6,T6,0.0,P017 +CGTGTCTAGTCTCGGC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1148,0.01930693,0.008910891,0.001485149,0.14059407,2020,3,T3,0.0,P020 +ATCACGATCGCTTAGA.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1133,0.023901809,0.010981912,0.0,0.3003876,3096,12,T12,0.0,P005 +CGACTTCAGGCTAGCA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,903,0.022674419,0.036627907,0.001744186,0.22093023,1720,2,T2,0.0,P022 +TCAGATGCAGTCAGAG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1335,0.025405636,0.017079419,0.000640478,0.3975235,4684,2,T2,0.0,P023 +GTAACTGCAAAGTGCG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1162,0.055572335,0.06644518,0.0,0.24947146,3311,0,T0,0.0,P023 +GCCAAATCAAAGGTGC.02_XLJ019_T_5,1.173170996,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1644,0.05826886,0.005560929,0.0,0.2819149,4136,7,T7,1.173170996,P019 +CGATGTACATCTCCCA.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1174,0.03635734,0.004155125,0.0,0.28601107,2888,8,T8,0.0,P005 +GAATGAAGTCCTGCTT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,915,0.033533964,0.011607911,0.004299226,0.32803094,2326,0,T0,0.0,P025 +GGGCATCGTCGACTAT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1355,0.008170676,0.00635497,0.003177485,0.16068996,2203,4,T4,0.0,P022 +CGGACACAGTGTTGAA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1461,0.03897041,0.014433485,0.001443349,0.2549916,4157,0,T0,0.0,P025 +TGCTACCAGACAAAGG.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,825,0.08456535,0.018923713,0.0,0.20993495,1691,8,T8,0.0,P004 +ACTTACTCAGTCTTCC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1469,0.029867256,0.007743363,0.0,0.2699115,3616,0,T0,0.0,P005 +CTCGGAGCACTCAGGC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1128,0.035407014,0.11052283,0.000330907,0.18001324,3022,11,T11,0.0,P013 +GGTGAAGTCCCGGATG.02_LBH013_T_5,1.889356688,2,T,liver,R,Post_treatment,Chemo,1,1628,0.033333335,0.006875,0.0,0.26979166,4800,0,T0,1.889356688,P013 +CACCACTGTGAGTGAC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,435,0.08279431,0.001293661,0.01164295,0.23803364,773,1,T1,0.0,P019 +GAAATGATCACGCGGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,550,0.09322034,0.001883239,0.004708098,0.3323917,1062,0,T0,0.0,P019 +TGCGCAGAGCGTGAGT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1081,0.035822183,0.015537333,0.0,0.2442814,2317,5,T5,0.0,P023 +CACACAATCTCGTTTA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,1020,0.043291733,0.007410296,0.0,0.30694228,2564,1,T1,0.0,P001 +AGCTCCTCAATCCAAC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,680,0.07096172,0.003734827,0.003734827,0.08496732,1071,5,T5,0.0,P012 +CCCAATCGTACCATCA.02_LLY018_T_5,2.166018551,2,T,breast,NR,Post_treatment,Chemo,1,1309,0.017864078,0.03805825,0.0,0.19339806,2575,3,T3,2.166018551,P018 +TCGCGTTTCAAACAAG.02_LCL002_T_5,1.19917975,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1522,0.029804144,0.02526256,0.001135396,0.17967641,3523,6,T6,1.19917975,P002 +AGTCTTTGTACAGTTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2370,0.021334298,0.061110105,0.003796782,0.052612547,5531,4,T4,0.0,P025 +TAGTTGGGTGAGTATA.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,885,0.07060953,0.024743512,0.0,0.15932408,1657,6,T6,0.0,P023 +GGTGCGTCATACGCTA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,813,0.038431678,0.004658385,0.001552795,0.51086956,2576,1,T1,0.0,P019 +CCTACCATCTGTTGAG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,434,0.003911343,0.027379401,0.036505867,0.38591915,767,4,T4,0.0,P025 +GTTCATTTCATAGCAC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,800,0.07055961,0.0162206,0.00081103,0.03325223,1233,3,T3,0.0,P019 +CCACCTAAGGTGGGTT.02_HLH023_T_5,2.169119961,2,T,breast,NR,Post_treatment,Chemo,1,1188,0.0516991,0.051989544,0.0,0.2579146,3443,2,T2,2.169119961,P023 +GTAACTGGTGAGTATA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1033,0.040947545,0.016582064,0.002030457,0.39593908,2955,1,T1,0.0,P019 +TGGCCAGAGTGCCATT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1740,0.05746032,0.027619047,0.002222222,0.064444445,3150,4,T4,0.0,P002 +AATCGGTTCCGTACAA.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1475,0.024697222,0.00213726,0.0,0.32153884,4211,0,T0,0.0,P005 +TCGCGTTCAACCGCCA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1247,0.049415205,0.022222223,0.000877193,0.34590644,3420,2,T2,0.0,P022 +GTGCATAAGCGAGAAA.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1188,0.014104882,0.002169982,0.0,0.30922243,2765,8,T8,0.0,P005 +GTATCTTGTGTTTGGT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,803,0.034246575,0.034246575,0.000570776,0.24657534,1752,2,T2,0.0,P001 +GCCTCTACATGTTGAC.01_JLR004_T_5,1.217234359,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,2690,0.042695988,0.016849922,0.0,0.119948596,7003,0,T0,1.217234359,P004 +TACTCGCAGGCTAGCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1560,0.028052805,0.025459688,0.002593116,0.26308346,4242,0,T0,0.0,P025 +CTGAAACCATATACGC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1170,0.035070468,0.056047197,0.0,0.24549328,3051,2,T2,0.0,P023 +TTGGAACGTCCGAGTC.01_XLJ019_T_5,1.501263367,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,771,0.018615475,0.010471204,0.003490401,0.34729493,1719,7,T7,1.501263367,P019 +GCTTCCATCTTCTGGC.03_LBH013_T_5,1.170535188,3,T,liver,R,Progression,Chemo,1,2969,0.020984832,0.031061707,0.0,0.16891752,9626,5,T5,1.170535188,P013 +TACCTATTCATGTCCC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1020,0.032349374,0.010917913,0.0,0.2842701,2473,11,T11,0.0,P013 +CGTAGCGGTCCAACTA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1590,0.05770751,0.023978919,0.001581028,0.17417654,3795,6,T6,0.0,P020 +GTATTCTCAGCCAATT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,783,0.03116604,0.012358947,0.002149382,0.33261687,1861,1,T1,0.0,P019 +CACATAGTCCTTGGTC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1440,0.041666668,0.027059387,0.05531609,0.24952108,4176,6,T6,0.0,P022 +ATCGAGTCACCGATAT.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,1075,0.02344077,0.003348681,0.0,0.2771034,2389,11,T11,0.0,P017 +GGTGAAGCAACAACCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1580,0.038393978,0.011543287,0.001505646,0.23613551,3985,3,T3,0.0,P025 +GACGTTACAAGTCTGT.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,489,0.03211679,0.001459854,0.0,0.15912409,685,4,T4,0.0,P019 +CCTAAAGGTCTAAAGA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1337,0.012048192,0.003786575,0.004475043,0.29053357,2905,0,T0,0.0,P022 +ATGAGGGAGACACTAA.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,741,0.08630952,0.001488095,0.0,0.20238096,1344,0,T0,0.0,P004 +ATCTGCCGTTCCACTC.01_XLJ019_T_5,1.427840551,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,733,0.05466593,0.012147985,0.002208724,0.36167863,1811,1,T1,1.427840551,P019 +GCAGCCAGTACAGTTC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1475,0.050113466,0.011346445,0.0,0.38369894,5288,2,T2,0.0,P023 +CTCATTAAGCCAGTAG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,587,0.019595448,0.005689001,0.0,0.494311,1582,2,T2,0.0,P007 +GCAGTTAGTTTGGGCC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1943,0.00132246,0.04804937,0.00264492,0.1084417,4537,4,T4,0.0,P025 +GTTCATTGTTATCACG.01_XLJ019_T_5,1.536261119,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,762,0.024216523,0.012820513,0.005698006,0.24643874,1404,3,T3,1.536261119,P019 +TGAGCATGTCATGCCG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,798,0.075256556,0.04732041,0.003420753,0.22006841,1754,1,T1,0.0,P019 +TACTCGCAGTTGTAGA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1239,0.052915767,0.018718503,0.000359971,0.15550756,2778,11,T11,0.0,P013 +ACGATACCAGCGTCCA.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1207,0.040931545,0.039520115,0.000352858,0.22371207,2834,2,T2,0.0,P016 +AGCTTGACACGGTGTC.02_HFR012_T_5,1.555056229,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,665,0.05571227,0.009167842,0.0,0.2616361,1418,0,T0,1.555056229,P012 +ACACTGACACAAGACG.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1204,0.05622716,0.031487208,0.0,0.29322463,3557,8,T8,0.0,P013 +CATCGGGCAAGTAGTA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,849,0.04791996,0.022116903,0.0,0.28541338,1899,8,T8,0.0,P013 +GGCCGATCATGTAGTC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,712,0.089734875,0.010876955,0.0,0.22025833,1471,0,T0,0.0,P013 +GACCAATTCTTCCTTC.01_XLJ019_T_5,1.82474298,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,2290,0.021566201,0.019975252,0.001060633,0.2131872,5657,7,T7,1.82474298,P019 +TCACAAGTCGGATGTT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,958,0.020645844,0.006352568,0.002117523,0.2625728,1889,7,T7,0.0,P019 +CAACCAACAGATTGCT.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1045,0.0540906,0.06964165,0.0,0.21129142,2958,0,T0,0.0,P005 +AACACGTTCTGCGTAA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1460,0.044528063,0.006585137,0.000313578,0.1846974,3189,12,T12,0.0,P002 +ACTATCTAGACCTAGG.01_WYP025_T_5,0.996810265,1,T,breast,NR,Pre_treatment,Chemo,1,2671,0.047306176,0.0282523,0.002135348,0.0630749,6088,4,T4,0.996810265,P025 +CCAATCCAGTCCATAC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1256,0.037996545,0.026943006,0.000345423,0.20483592,2895,1,T1,0.0,P019 +TCAACGACAAGTAATG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,570,0.020542318,0.009860313,0.0,0.3385374,1217,1,T1,0.0,P019 +TTTGGTTCAGGAACGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1213,0.005777778,0.078666665,0.005333333,0.044444446,2250,4,T4,0.0,P025 +CCGTACTCATGCCCGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,866,0.036797933,0.0058102,0.000645578,0.13557133,1549,3,T3,0.0,P020 +CGGACACGTTACAGAA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,2025,0.027524753,0.028316831,0.000792079,0.16950496,5050,6,T6,0.0,P020 +ATAAGAGTCTTCGAGA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1188,0.031562973,0.04066768,0.00030349,0.28528073,3295,8,T8,0.0,P018 +AGAGTGGAGGCTCTTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,680,0.050045498,0.06824386,0.009099181,0.07643312,1099,5,T5,0.0,P025 +GGACATTCAAGTACCT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1190,0.011674572,0.001459322,0.001824152,0.3367384,2741,1,T1,0.0,P018 +CCGTGGAAGAATGTGT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,790,0.028985508,0.011042098,0.002760524,0.22360249,1449,2,T2,0.0,P025 +CTTAACTCAAACTGCT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1052,0.057152636,0.00513347,0.0,0.31416836,2922,11,T11,0.0,P013 +GTGCGGTGTACTTAGC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1078,0.034460954,0.015807778,0.0,0.42997155,3163,1,T1,0.0,P023 +TTCTTAGGTCTTGTCC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,908,0.029054053,0.058783785,0.002027027,0.05945946,1480,6,T6,0.0,P022 +GCAGCCAGTGACAAAT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1023,0.043403525,0.013751611,0.0,0.23979373,2327,0,T0,0.0,P013 +CGAGCACCAATGGACG.02_HLH023_T_5,1.596587003,2,T,breast,NR,Post_treatment,Chemo,1,2388,0.035451133,0.016682886,0.000139024,0.19532879,7193,7,T7,1.596587003,P023 +GGTGTTAAGACATAAC.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,914,0.045519885,0.00574988,0.000479157,0.2764734,2087,6,T6,0.0,P016 +GACGTTACAGGTCGTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2498,0.020243675,0.028303655,0.004686036,0.12783505,5335,4,T4,0.0,P025 +GTGCAGCCACGGACAA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1381,0.054860715,0.054576464,0.0,0.105173394,3518,12,T12,0.0,P023 +GGGCATCAGTCGTTTG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1553,0.026976308,0.023223082,0.0,0.2704668,4263,2,T2,0.0,P023 +TACGGGCAGAAACGCC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,654,0.043133803,0.006161972,0.0,0.20334508,1136,3,T3,0.0,P012 +TGCGGGTTCAATAAGG.02_ZFY017_T_5,0.0,2,T,lymph_node,NR,Post_treatment,anti-PDL1+Chemo,0,747,0.027896997,0.007868383,0.0,0.2832618,1398,2,T2,0.0,P017 +TGTGTTTCACAACGTT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1431,0.03824772,0.041360907,0.0,0.25928396,4497,0,T0,0.0,P023 +AGGGTGAGTAGAGCTG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,962,0.06921676,0.00273224,0.0,0.34881604,2196,4,T4,0.0,P023 +CAGTAACAGGTGGGTT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1673,0.04515839,0.02740957,0.0,0.20916648,4451,6,T6,0.0,P023 +ACGGGTCTCATAACCG.01_WX016_T_5,1.848117035,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,3102,0.023325657,0.012613875,0.0,0.23315647,9989,3,T3,1.848117035,P016 +AAAGTAGTCACCATAG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,993,0.0328125,0.006770833,0.000520833,0.19739583,1920,6,T6,0.0,P023 +CCTTCGACAAGGACTG.01_HFR012_T_5,1.137792899,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,776,0.020966802,0.042516015,0.0,0.23005241,1717,3,T3,1.137792899,P012 +CGATGTAAGATGTCGG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1301,0.04700253,0.005066142,0.0,0.31663382,3553,1,T1,0.0,P020 +ACCCACTAGATGGGTC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,848,0.009453072,0.002025658,0.006752194,0.2538825,1481,4,T4,0.0,P022 +ACGTCAACAAGTCATC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,526,0.09616888,0.011727912,0.0,0.3119625,1279,1,T1,0.0,P013 +ATGTGTGCACATGGGA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,510,0.028181817,0.004545454,0.0,0.41363636,1100,2,T2,0.0,P007 +CACAGGCTCAATAAGG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1672,0.012041745,0.059673537,0.000535189,0.15761305,3737,5,T5,0.0,P018 +TACTTGTCAAGTTCTG.02_HFR012_T_5,1.409034242,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,806,0.030162413,0.012180975,0.000580046,0.27494198,1724,5,T5,1.409034242,P012 +CAGAATCTCACCGGGT.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,618,0.07020164,0.012696042,0.0,0.2935026,1339,0,T0,0.0,P004 +TATCAGGGTGAGCGAT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,547,0.048543688,0.004854369,0.0,0.34271845,1030,1,T1,0.0,P012 +GATCGATCAGACGCCT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,460,0.060919542,0.028735632,0.0,0.22873563,870,0,T0,0.0,P001 +CTAGTGAGTCATGCCG.02_WYP025_T_5,2.285048783,2,T,breast,NR,Post_treatment,Chemo,1,1030,0.04803695,0.026789838,0.000923788,0.21016166,2165,3,T3,2.285048783,P025 +CAAGAAAAGACAATAC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,813,0.04,0.028275862,0.002758621,0.16275862,1450,5,T5,0.0,P019 +ATCATGGGTGATAAAC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1202,0.08588008,0.022823984,0.0,0.12147002,2585,0,T0,0.0,P012 +CTGTTTACAAGTCATC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,852,0.09709379,0.035006605,0.0,0.036327608,1514,4,T4,0.0,P023 +TCAATCTTCGTCTGCT.02_HFR012_T_5,1.544259835,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1210,0.03547497,0.009854158,0.0,0.22979897,2537,3,T3,1.544259835,P012 +GACCAATAGGCCCTCA.01_JLR004_T_5,1.615906263,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1178,0.0752363,0.05708885,0.0,0.09867675,2645,5,T5,1.615906263,P004 +CTGATAGTCTTTACGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1361,0.03544601,0.016197182,0.002112676,0.20586854,4260,1,T1,0.0,P019 +CTAGTGAAGATAGCAT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1301,0.04195968,0.014767933,0.000234412,0.39076418,4266,2,T2,0.0,P023 +ACGGGCTAGTGGGCTA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1396,0.04644809,0.021311475,0.000273224,0.2773224,3660,6,T6,0.0,P002 +CAACCAAAGTACATGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,761,0.06338028,0.014626219,0.006500542,0.2708559,1846,2,T2,0.0,P019 +AGATTGCTCACTATTC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1663,0.013354459,0.049796287,0.0,0.21548212,4418,0,T0,0.0,P023 +AGCATACAGGATGCGT.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1064,0.029501915,0.013409962,0.0,0.2578544,2610,2,T2,0.0,P005 +TGTGTTTCAATAGAGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,785,0.07665505,0.018292682,0.008710802,0.08885018,1148,4,T4,0.0,P025 +GGTATTGTCGTTACAG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,941,0.03448276,0.014540922,0.00083091,0.299543,2407,8,T8,0.0,P013 +GGAACTTAGCTCCTCT.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,559,0.0372191,0.007022472,0.0,0.49087077,1424,1,T1,0.0,P007 +GACTAACTCAGTTGAC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,465,0.08220859,0.0,0.001226994,0.1202454,815,4,T4,0.0,P012 +TTTGGTTCACATGACT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,739,0.035757575,0.017575758,0.001212121,0.27939394,1650,2,T2,0.0,P025 +GGTGAAGAGCTTATCG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1137,0.08996898,0.002585315,0.000517063,0.0966908,1934,5,T5,0.0,P023 +CTTACCGTCCACTGGG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1851,0.028939351,0.008031016,0.0,0.3838272,7222,2,T2,0.0,P005 +AAGGAGCCATCGACGC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,577,0.070058994,0.002212389,0.0,0.3178466,1356,5,T5,0.0,P012 +CCGTGGACAGGAATCG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1082,0.081953645,0.002483444,0.001241722,0.29056293,2416,0,T0,0.0,P025 +ATTGGTGCATGAGCGA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,725,0.042562723,0.002240144,0.0,0.5022401,2232,1,T1,0.0,P007 +GATCTAGTCACTCCTG.01_XLJ019_T_5,1.717796393,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,658,0.034995627,0.003499563,0.004374453,0.27471566,1143,7,T7,1.717796393,P019 +GCAGCCAAGGTGTGGT.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1409,0.03943662,0.018661972,0.0,0.17676057,2840,3,T3,0.0,P016 +ACGCCGAGTTAAGATG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,934,0.069869,0.031191517,0.0,0.08109794,1603,5,T5,0.0,P023 +AGTGTCATCAGGATCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,2573,0.017169429,0.005842375,0.000119232,0.18087517,8387,5,T5,0.0,P025 +ACATCAGTCGCCGTGA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1231,0.04360465,0.03911205,0.0,0.25845665,3784,0,T0,0.0,P023 +GCATGTATCTAGCACA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,823,0.039554317,0.04178273,0.0,0.26518106,1795,2,T2,0.0,P001 +GGACAAGCATTGGTAC.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,999,0.051201012,0.007585335,0.000632111,0.17193426,1582,12,T12,0.0,P022 +TACTCGCTCCAAATGC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1248,0.055062167,0.022202486,0.0,0.08703375,2252,8,T8,0.0,P013 +CCGTTCATCTGGCGTG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1472,0.052003816,0.005725191,0.000715649,0.22948474,4192,6,T6,0.0,P002 +CGAATGTTCCGTCAAA.02_XLJ019_T_5,2.288318886,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,666,0.08305085,0.034745764,0.001694915,0.023728814,1180,3,T3,2.288318886,P019 +GGGAGATCACTGTTAG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,652,0.04393673,0.025483305,0.0,0.22934973,1138,5,T5,0.0,P019 +CAGCAGCAGAGGTAGA.01_JLR004_T_5,1.423763748,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1235,0.04313602,0.02581864,0.0,0.27361462,3176,0,T0,1.423763748,P004 +ACGCAGCGTTCGCGAC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1348,0.043339416,0.037864964,0.009124087,0.06569343,2192,4,T4,0.0,P025 +AGTGAGGCAGACAAAT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,858,0.027920227,0.010256411,0.003418803,0.3019943,1755,1,T1,0.0,P025 +CTGCTGTGTAAGGGCT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,751,0.041304346,0.026086956,0.0,0.32010868,1840,2,T2,0.0,P001 +CCTTTCTTCGCATGAT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1221,0.013919096,0.066985644,0.003044802,0.11439756,2299,0,T0,0.0,P022 +GGGACCTCAAGAAAGG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1460,0.015649868,0.032095492,0.0,0.23342176,3770,12,T12,0.0,P005 +CAAGGCCTCCTTTACA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1788,0.058982037,0.03772455,0.00508982,0.041616768,3340,4,T4,0.0,P025 +CGTCAGGTCGAGAGCA.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1058,0.06672638,0.033139274,0.000895656,0.18181819,2233,0,T0,0.0,P019 +AGCTCTCTCTTCCTTC.02_XLJ019_T_5,1.793953315,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1770,0.03123521,0.03147184,0.0,0.21036442,4226,7,T7,1.793953315,P019 +CGGACGTCATTCCTGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,868,0.039365772,0.02788409,0.003280481,0.2367414,1829,0,T0,0.0,P019 +TGGGCGTAGGTGATTA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1764,0.08965897,0.0220022,0.00220022,0.07810781,3636,11,T11,0.0,P022 +CACACCTAGTTACCCA.01_ZJ005_T_5,2.030048105,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1603,0.015018485,0.010166358,0.0,0.24445471,4328,12,T12,2.030048105,P005 +CTTAACTAGAATAGGG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1603,0.06229885,0.009885058,0.000229885,0.3264368,4350,5,T5,0.0,P019 +CCATTCGCATCACCCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1171,0.04075896,0.014406184,0.001054111,0.25579762,2846,0,T0,0.0,P025 +GAGTCCGAGAGCTGGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,938,0.052594174,0.019900497,0.008528785,0.07818053,1407,4,T4,0.0,P025 +GGTATTGAGGATATAC.02_WYP025_T_5,1.82578316,2,T,breast,NR,Post_treatment,Chemo,1,1615,0.038637664,0.04550658,0.002289639,0.110188894,3494,7,T7,1.82578316,P025 +GTGCTTCGTGTTGAGG.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,893,0.040983606,0.0568306,0.0,0.04480874,1830,8,T8,0.0,P013 +CGTGTCTGTCACCTAA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1184,0.05112316,0.018977536,0.000387297,0.21843532,2582,11,T11,0.0,P020 +CACATTTGTTAAAGAC.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1291,0.037369642,0.01825029,0.000869061,0.32618773,3452,12,T12,0.0,P018 +TGAAAGAAGAGGTAGA.01_XLJ019_T_5,2.265603568,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1015,0.065743946,0.026198715,0.000494315,0.22244191,2023,7,T7,2.265603568,P019 +CTAAGACTCTGATACG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1259,0.020351846,0.016557433,0.00103484,0.19454984,2899,0,T0,0.0,P025 +TCGGGACTCTTTACGT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,696,0.06066536,0.022178734,0.003261579,0.30332682,1533,0,T0,0.0,P022 +AAGGAGCAGTGTGGCA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1029,0.070020124,0.010060363,0.001609658,0.2720322,2485,2,T2,0.0,P022 +AGGGTGACAAAGGAAG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1852,0.059792943,0.011620536,0.0,0.18275934,4733,11,T11,0.0,P005 +AGCGGTCTCAGCTGGC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1204,0.04205827,0.00493421,0.000234962,0.4074248,4256,5,T5,0.0,P023 +GGATGTTGTAATAGCA.02_XLJ019_T_5,1.360763295,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1567,0.060091443,0.01665578,0.002286088,0.12148922,3062,3,T3,1.360763295,P019 +CAGCTAAGTGTTGGGA.02_XLJ019_T_5,1.544782589,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,2120,0.08650875,0.037487127,0.0,0.13820803,4855,7,T7,1.544782589,P019 +AGACGTTTCGCAGGCT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,668,0.041884817,0.017015707,0.0,0.36518323,1528,1,T1,0.0,P001 +CTGGTCTGTGCATCTA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1532,0.011486251,0.005221023,0.000348068,0.22206752,2873,3,T3,0.0,P018 +TCAGGTATCCAGAGGA.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1354,0.06148389,0.012415016,0.0,0.29352647,3383,8,T8,0.0,P005 +GTTAAGCGTGAGGGAG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1513,0.030734107,0.02687039,0.0,0.36336493,5694,12,T12,0.0,P023 +CTAAGACAGCTAGCCC.02_CLR001_T_5,2.529281818,2,T,chest_wall,NR,Post_treatment,Chemo,1,789,0.038352273,0.024621213,0.0,0.38020834,2112,1,T1,2.529281818,P001 +ATCATGGGTTCTGAAC.01_XLJ019_T_5,1.503336736,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,768,0.038040347,0.023631124,0.004034582,0.3089337,1735,0,T0,1.503336736,P019 +CGATGGCCAGCTGTGC.01_XCY022_T_5,2.028416505,1,T,breast,R,Pre_treatment,Chemo,1,2776,0.01236476,0.018968666,0.000702543,0.13502881,7117,7,T7,2.028416505,P022 +TAAGTGCCAAATACAG.01_WYP025_T_5,1.106105085,1,T,breast,NR,Pre_treatment,Chemo,1,2287,0.030645566,0.023109771,0.002763125,0.053504143,3981,4,T4,1.106105085,P025 +CTACGTCAGAGCTTCT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,931,0.09193246,0.006566604,0.001876173,0.27251408,2132,6,T6,0.0,P022 +TGCTACCTCGCAAGCC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,822,0.05346913,0.019096117,0.004455761,0.21578613,1571,0,T0,0.0,P019 +CCTATTAGTATAGGGC.02_ZJ005_T_5,1.471092458,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1131,0.05739994,0.006515669,0.0,0.31492397,3223,0,T0,1.471092458,P005 +GGTGTTAGTAAGCACG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,792,0.038057085,0.033049576,0.002003005,0.2999499,1997,2,T2,0.0,P019 +CGTGTCTAGAATGTGT.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,695,0.089810014,0.02849741,0.000863558,0.046632126,1158,6,T6,0.0,P019 +ACCGTAATCTCAAACG.02_WYP025_T_5,0.977512991,2,T,breast,NR,Post_treatment,Chemo,1,1545,0.024527187,0.030437352,0.001182033,0.14125295,3384,5,T5,0.977512991,P025 +CTGAAGTCAGTAACGG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1375,0.018716577,0.024331551,0.000802139,0.29652408,3740,12,T12,0.0,P022 +GCATGCGCATTGGCGC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,785,0.042450294,0.012896292,0.0,0.25685117,1861,0,T0,0.0,P012 +ATCCACCTCAGGCAAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1339,0.047830544,0.03689785,0.001366587,0.15852408,2927,11,T11,0.0,P025 +ACCAGTATCAGTTAGC.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1721,0.05682639,0.013965808,0.0,0.2689622,4153,4,T4,0.0,P019 +ACGGAGAGTCCCTTGT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,634,0.07037037,0.043209877,0.0,0.3160494,1620,2,T2,0.0,P001 +TCAGCAAGTAGAGGAA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,896,0.037962038,0.00999001,0.002497503,0.31918082,2002,1,T1,0.0,P019 +ACCAGTACATCCTTGC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1343,0.04143798,0.011800219,0.0,0.25274423,3644,2,T2,0.0,P005 +CTGCTGTGTATAGGGC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1241,0.010534846,0.008914101,0.000405186,0.19165316,2468,0,T0,0.0,P005 +CTCGAGGTCAAAGACA.01_YSS020_T_5,3.107596989,1,T,breast,R,Pre_treatment,Chemo,1,2064,0.03776824,0.012875536,0.003218884,0.14291845,4660,3,T3,3.107596989,P020 +CAGATCAAGCACCGTC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1274,0.027312228,0.036002483,0.003103662,0.23122284,3222,6,T6,0.0,P022 +CCAGCGATCAGGCAAG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,901,0.0489418,0.004850088,0.0,0.30291006,2268,8,T8,0.0,P013 +CAGCATAAGACCTTTG.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1494,0.039912004,0.008799497,0.001257071,0.16750471,3182,5,T5,0.0,P016 +CACCTTGGTAACGTTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1808,0.02481438,0.03008988,0.048456427,0.24013287,5118,6,T6,0.0,P025 +CCACCTATCTGAAAGA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1887,0.012154125,0.039565556,0.003361779,0.10783553,3867,4,T4,0.0,P025 +ATTGGACCATCTCGCT.02_ZFY017_T_5,0.0,2,T,lymph_node,NR,Post_treatment,anti-PDL1+Chemo,0,430,0.044510387,0.014836796,0.0,0.20771514,674,5,T5,0.0,P017 +TTCGAAGAGTACGATA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1397,0.023295071,0.027008777,0.002025658,0.17319378,2962,5,T5,0.0,P025 +TGACAACCAGAGCCAA.02_ZJ005_T_5,1.438590254,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1129,0.06210621,0.00330033,0.00030003,0.40234023,3333,2,T2,1.438590254,P005 +ACTTGTTCACACTGCG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1644,0.04872579,0.008358818,0.0,0.20509684,4905,8,T8,0.0,P005 +ACTGATGCACGACGAA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1377,0.019458802,0.023107328,0.000304044,0.24201885,3289,2,T2,0.0,P019 +GGCTGGTCAGTCCTTC.01_YSS020_T_5,1.222282274,1,T,breast,R,Pre_treatment,Chemo,1,1770,0.021457966,0.014991182,0.002351558,0.10699589,3402,5,T5,1.222282274,P020 +GTCTCGTAGTAGTGCG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1541,0.058595765,0.01806918,0.1750129,0.04155911,3874,4,T4,0.0,P025 +CTGCGGAGTCTAGTGT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1369,0.028293546,0.007662835,0.000884173,0.3147657,3393,12,T12,0.0,P002 +AGAGCTTAGAACAACT.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1782,0.063356735,0.006853895,0.000167168,0.34319624,5982,2,T2,0.0,P005 +CCTAGCTCAATGTAAG.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,2529,0.035253298,0.05260236,0.000138793,0.10673144,7205,8,T8,0.0,P013 +TTGCGTCGTTTAGGAA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,465,0.07107232,0.008728179,0.0,0.2680798,802,2,T2,0.0,P013 +GGTGCGTCAGGCGATA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,968,0.07089552,0.012852404,0.0,0.2106136,2412,0,T0,0.0,P013 +AAGGAGCCAGCGTTCG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,756,0.03645593,0.002768805,0.000922935,0.4693124,2167,1,T1,0.0,P019 +CTGAAGTCAATCTGCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1127,0.036248755,0.009976721,0.001995344,0.3032923,3007,0,T0,0.0,P025 +TGGGCGTCATGACATC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,711,0.033519555,0.0103751,0.002394254,0.1660016,1253,3,T3,0.0,P020 +GCGAGAAAGTGTTGAA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1225,0.07710418,0.00765156,0.0,0.2954679,3398,11,T11,0.0,P022 +AGAGCTTTCATAAAGG.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1368,0.03734313,0.004285277,0.0,0.29231712,3267,8,T8,0.0,P005 +CACACCTTCCACGAAT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1115,0.043792516,0.020833334,0.0,0.27465987,2352,1,T1,0.0,P023 +GACGGCTGTTACGGAG.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1392,0.052208837,0.006961178,0.0,0.26907632,3735,0,T0,0.0,P023 +AGCAGCCAGTGCTGCC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,820,0.046336208,0.005747126,0.004310345,0.47306034,2784,1,T1,0.0,P022 +AGCGTATCATCGTCGG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,580,0.0496063,0.002362205,0.005511811,0.38110235,1270,1,T1,0.0,P022 +GTTACAGTCAGCTCTC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1254,0.065209605,0.010390541,0.000358295,0.19204587,2791,0,T0,0.0,P013 +TGCGCAGGTCCTCCAT.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,889,0.08883495,0.050970875,0.0,0.14757282,2060,5,T5,0.0,P004 +AAATGCCGTCCTGCTT.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1308,0.039563034,0.005314438,0.0,0.28343666,3387,11,T11,0.0,P005 +AGCATACCAGCTGTTA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,697,0.029634735,0.015161958,0.0,0.30186078,1451,1,T1,0.0,P007 +AGAGCGACAGACAGGT.02_WYP025_T_5,2.459964658,2,T,breast,NR,Post_treatment,Chemo,1,1609,0.036320753,0.026886793,0.001179245,0.2740566,4240,7,T7,2.459964658,P025 +CCTACCAAGGCAATTA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,743,0.0489709,0.000709723,0.001419446,0.20936835,1409,1,T1,0.0,P012 +CCGGGATTCAAAGTAG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1152,0.020733653,0.040669855,0.000398724,0.1507177,2508,12,T12,0.0,P018 +TACCTTACAACTTGAC.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1891,0.041422717,0.013905153,0.00102459,0.3824649,6832,1,T1,0.0,P002 +GTATCTTTCGATGAGG.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1425,0.027673546,0.01641651,0.000938086,0.06144465,2132,4,T4,0.0,P022 +GATCAGTAGTGCGTGA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,2617,0.021152629,0.043825205,0.0,0.1851805,7895,5,T5,0.0,P013 +CACAGTACATTGCGGC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,647,0.03683858,0.002009377,0.0,0.35365036,1493,7,T7,0.0,P012 +AGTGTCAAGAACTCGG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1474,0.04798427,0.012782694,0.000196657,0.36794493,5085,8,T8,0.0,P013 +TAAGCGTTCTGCCAGG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,838,0.038148526,0.04069176,0.002543235,0.26144457,1966,6,T6,0.0,P019 +CAGCTGGGTTCGTCTC.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,724,0.043503147,0.00057241,0.0,0.38694906,1747,1,T1,0.0,P023 +TCTCATATCAGTTAGC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,554,0.06688963,0.010033445,0.0,0.31270903,1196,2,T2,0.0,P013 +TGATTTCGTGACGCCT.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,980,0.019439422,0.02079566,0.0,0.28074142,2212,2,T2,0.0,P005 +GGTGTTACAAGCTGTT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1674,0.032176286,0.02476599,0.001365055,0.31825274,5128,6,T6,0.0,P022 +AAGGAGCCAATGAAAC.02_LLY018_T_5,2.016866059,2,T,breast,NR,Post_treatment,Chemo,1,891,0.025331724,0.042219542,0.0,0.20506634,1658,5,T5,2.016866059,P018 +AAAGATGGTCGCTTTC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,559,0.033968516,0.056338027,0.004142502,0.24026512,1207,0,T0,0.0,P019 +CTTAGGATCCCTAACC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,960,0.04526167,0.031471003,0.0,0.34724188,2828,2,T2,0.0,P023 +CATGCCTTCCGTCAAA.02_LLY018_T_5,1.593534741,2,T,breast,NR,Post_treatment,Chemo,1,1149,0.032382965,0.08870116,0.000703978,0.18866596,2841,1,T1,1.593534741,P018 +GTATCTTCAGGTGGAT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1375,0.022107081,0.014507772,0.000690846,0.16062176,2895,7,T7,0.0,P020 +GTGCATATCGCATGGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,951,0.041533545,0.005591054,0.002795527,0.3913738,2504,1,T1,0.0,P019 +CATATTCCAGATCGGA.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,590,0.09471366,0.030837005,0.001101322,0.03524229,908,12,T12,0.0,P002 +CGTTAGACAAGCGATG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1268,0.080149814,0.019850187,0.000749064,0.17977528,2670,6,T6,0.0,P019 +TGCTACCTCCTGCTTG.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1322,0.06668496,0.007958287,0.0,0.25960484,3644,2,T2,0.0,P013 +GACCAATCACGTAAGG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1645,0.029728465,0.03628277,0.000234082,0.23970038,4272,0,T0,0.0,P023 +CTAGTGAGTATAGGTA.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1445,0.03453909,0.026837807,0.0,0.3099183,4285,2,T2,0.0,P013 +GCGGGTTTCGTTTATC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,894,0.030900372,0.005860416,0.00319659,0.33084708,1877,1,T1,0.0,P019 +GTGAAGGCAGATGGCA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,503,0.07011494,0.002298851,0.0,0.2321839,870,1,T1,0.0,P012 +CGACCTTAGCAACGGT.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,652,0.08282828,0.006060606,0.0,0.33468014,1485,1,T1,0.0,P001 +AGAGTGGGTCCTCCAT.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1383,0.045333333,0.012102564,0.000615385,0.42297435,4875,2,T2,0.0,P004 +TTGAACGCAAGAGGCT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,581,0.033570703,0.01525941,0.001017294,0.2360122,983,0,T0,0.0,P012 +CCGTGGAGTATAGGGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,743,0.046278924,0.00750469,0.003752345,0.32145092,1599,1,T1,0.0,P019 +GGGTCTGGTTATGCGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,970,0.08084023,0.024188414,0.007001909,0.08147676,1571,4,T4,0.0,P025 +GCAGCCATCTTCCTTC.01_WYP025_T_5,1.406407657,1,T,breast,NR,Pre_treatment,Chemo,1,1121,0.0566352,0.033314824,0.0094392,0.0755136,1801,4,T4,1.406407657,P025 +GGAACTTCATCGGTTA.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1294,0.05931818,0.008863636,0.0,0.42522728,4400,1,T1,0.0,P023 +AGTAGTCAGAAGGCCT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,502,0.05141658,0.004197272,0.0,0.28121722,953,2,T2,0.0,P012 +CGAACATGTCACTTCC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1336,0.019634578,0.030542677,0.012817017,0.27079356,3667,2,T2,0.0,P022 +TCGGTAACAGACACTT.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1621,0.036146823,0.001863238,0.000745295,0.44046953,5367,1,T1,0.0,P022 +AACTGGTTCAAACAAG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,738,0.048440065,0.009852217,0.0,0.19622332,1218,1,T1,0.0,P007 +TACGGTAAGTCACGCC.01_WX016_T_5,1.279373972,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,2146,0.018346773,0.026612904,0.0,0.10141129,4960,5,T5,1.279373972,P016 +ACACTGAAGTACACCT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,833,0.040145986,0.024330901,0.005474452,0.2615572,1644,7,T7,0.0,P019 +CATCCACCACCATCCT.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,419,0.02097902,0.023776224,0.0,0.24895105,715,1,T1,0.0,P018 +AGGGTGAAGAGGTACC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1143,0.012468828,0.013715711,0.0,0.21654198,2406,2,T2,0.0,P005 +CTTTGCGAGAGAACAG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1702,0.018443113,0.023473054,0.001197605,0.22850299,4175,4,T4,0.0,P002 +GTACGTATCTAACCGA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1265,0.050600063,0.011028219,0.004541032,0.26240674,3083,0,T0,0.0,P022 +CAAGTTGCAGGAATGC.01_XLJ019_T_5,0.54025713,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,2216,0.013676908,0.021010902,0.001189296,0.10346878,5045,3,T3,0.54025713,P019 +AGTGTCACAATCGAAA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,769,0.043022614,0.014892443,0.014892443,0.3171539,1813,0,T0,0.0,P019 +CTTACCGTCGATAGAA.01_XLJ019_T_5,2.195611825,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,962,0.02402746,0.044622425,0.007437071,0.14988558,1748,3,T3,2.195611825,P019 +AACCATGAGTTAGGTA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,925,0.053540587,0.005613126,0.000431779,0.38860103,2316,4,T4,0.0,P012 +CGCGTTTGTAAGCACG.01_XLJ019_T_5,2.908527701,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,549,0.04574468,0.013829787,0.007446809,0.2638298,940,7,T7,2.908527701,P019 +CTCTGGTTCAGCGACC.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,528,0.09190672,0.008230452,0.005486968,0.027434843,729,12,T12,0.0,P018 +CATCCACAGCCCAATT.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1843,0.021607278,0.008908263,0.0,0.22479151,5276,6,T6,0.0,P005 +CAGATCAGTCCGAAGA.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,2736,0.056397215,0.023775296,0.0,0.23443547,9043,5,T5,0.0,P004 +TAGCCGGAGAGATGAG.01_YSS020_T_5,3.559425985,1,T,breast,R,Pre_treatment,Chemo,1,1258,0.02763316,0.012014417,0.001601922,0.16259511,2497,3,T3,3.559425985,P020 +AAAGCAAAGCGTGTCC.01_YSS020_T_5,2.396625644,1,T,breast,R,Pre_treatment,Chemo,1,1281,0.023983316,0.011817866,0.000347584,0.1904762,2877,3,T3,2.396625644,P020 +TCTGAGAGTACCCAAT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1719,0.04087332,0.029195227,0.000253872,0.14749937,3939,2,T2,0.0,P002 +ACGCCAGAGATGCGAC.01_WYP025_T_5,0.849101883,1,T,breast,NR,Pre_treatment,Chemo,1,1894,0.039580353,0.08392942,0.005960897,0.042918455,4194,4,T4,0.849101883,P025 +CGACCTTGTGCCTGGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1098,0.0516882,0.003751563,0.003334723,0.3297207,2399,4,T4,0.0,P019 +CACAAACGTGTTTGTG.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1264,0.024618993,0.01031653,0.000468933,0.41828838,4265,1,T1,0.0,P019 +GGAGCAACAAGGTTCT.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1252,0.06356712,0.026267402,0.001050696,0.3438403,3807,2,T2,0.0,P022 +CGTGTAATCATAGCAC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1082,0.028289178,0.061068702,0.053435113,0.13920072,2227,6,T6,0.0,P020 +TTATGCTCACGAAAGC.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,908,0.07522567,0.022567702,0.0,0.20361084,1994,3,T3,0.0,P012 +TCAGCTCGTACGAAAT.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,1067,0.023129743,0.002529816,0.0,0.37911096,2767,5,T5,0.0,P017 +GCGCAACTCACAAACC.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1219,0.077770576,0.013609851,0.0,0.308814,3086,1,T1,0.0,P004 +CTGTTTATCTTGTATC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1480,0.04709952,0.016498137,0.000532198,0.27700904,3758,0,T0,0.0,P023 +CTGCCTAAGTCCAGGA.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1676,0.055151112,0.032428853,0.0,0.287227,4533,8,T8,0.0,P013 +ATAAGAGCAGTTCCCT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1480,0.014902753,0.08638545,0.001010356,0.17428644,3959,6,T6,0.0,P002 +CTCATTAAGGCATTGG.01_WX016_T_5,2.496850681,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1609,0.02914749,0.01775148,0.0,0.23033093,4563,6,T6,2.496850681,P016 +CATATGGCACATCTTT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,866,0.03960396,0.05374823,0.0,0.20226309,2121,0,T0,0.0,P013 +TGCCCTACAAACTGTC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1347,0.062284656,0.003445534,0.000265041,0.29048502,3773,7,T7,0.0,P012 +AGCTCTCAGCTAGTCT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1578,0.015908526,0.060154114,0.000248571,0.19960229,4023,0,T0,0.0,P018 +TTCCCAGTCAGCATGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,475,0.018716577,0.037433155,0.004010695,0.23663102,748,2,T2,0.0,P019 +TCTTCGGGTATATCCG.01_XLJ019_T_5,1.388119167,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,882,0.01613988,0.003362475,0.00134499,0.11566913,1487,5,T5,1.388119167,P019 +TGACTTTAGAAGCCCA.02_HFR012_T_5,0.866722703,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1278,0.04890605,0.015122266,0.00032175,0.20302445,3108,0,T0,0.866722703,P012 +GTGCTTCAGAGTGAGA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,811,0.06854839,0.016129032,0.0,0.31048387,1984,2,T2,0.0,P001 +AACCATGTCGTGGTCG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1035,0.022133416,0.006455579,0.001229634,0.44850907,3253,1,T1,0.0,P025 +CAGATCAGTACACCGC.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1286,0.07875458,0.007783883,0.001831502,0.07326008,2184,3,T3,0.0,P022 +AACCATGCATCACAAC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,793,0.065945946,0.028108109,0.0,0.26,1850,1,T1,0.0,P001 +CCGGGATGTGTTTGGT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1117,0.07500987,0.033557046,0.0,0.24990131,2533,5,T5,0.0,P023 +TGTATTCCATATACCG.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1930,0.046884272,0.006083086,0.0,0.38412464,6740,1,T1,0.0,P005 +TAAGTGCCAGACAAGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,768,0.06585789,0.022530328,0.002310803,0.33044484,1731,1,T1,0.0,P019 +GCACTCTAGACAAAGG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,698,0.012041285,0.002293578,0.0,0.46158257,1744,1,T1,0.0,P007 +TCTTCGGGTGTCGCTG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,872,0.031100478,0.022727273,0.002392344,0.19078948,1672,11,T11,0.0,P022 +GAAGCAGCAGTGACAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1055,0.04681504,0.008058327,0.002302379,0.31197238,2606,1,T1,0.0,P025 +GCAATCAAGTGACATA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,434,0.04304636,0.01986755,0.034768213,0.19205298,604,4,T4,0.0,P025 +GGGAATGGTCCTAGCG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,847,0.025974026,0.030303031,0.0,0.38787878,2310,1,T1,0.0,P012 +GACTACATCGGTGTCG.01_ZJ005_T_5,0.841125894,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1903,0.05857967,0.007390051,0.000180245,0.23918529,5548,11,T11,0.841125894,P005 +TTGACTTAGACCTTTG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,970,0.0835851,0.007385029,0.0,0.36119503,2979,0,T0,0.0,P023 +AACTCTTTCTTGCAAG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,498,0.023121387,0.006606111,0.0,0.47811726,1211,1,T1,0.0,P007 +CCGTACTCAGACAAAT.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,605,0.034031413,0.002617801,0.002617801,0.07460733,764,4,T4,0.0,P022 +GCAAACTAGGTACTCT.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1809,0.06086086,0.007807808,0.0,0.22682683,4995,2,T2,0.0,P005 +TTAGGCACATCTGGTA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,781,0.06491885,0.006242198,0.005617978,0.2915106,1602,1,T1,0.0,P019 +ACGGGCTGTCACTGGC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,702,0.04181601,0.018518519,0.0,0.3339307,1674,2,T2,0.0,P001 +AACTCCCTCGCGCCAA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,676,0.033877037,0.008155583,0.0,0.45796737,1594,1,T1,0.0,P001 +CCATTCGAGCTCTCGG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,703,0.036363635,0.002727273,0.0,0.51272726,2200,1,T1,0.0,P007 +ACTGCTCTCTGCGACG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1148,0.037476808,0.020037105,0.000371058,0.27792206,2695,1,T1,0.0,P018 +TCATTTGAGACTAAGT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1432,0.04347826,0.009983897,0.001932367,0.23961353,3105,5,T5,0.0,P019 +GCGAGAAAGCAGATCG.02_HFR012_T_5,1.866125386,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,586,0.03843009,0.06295993,0.000817661,0.17661488,1223,1,T1,1.866125386,P012 +ACTGAGTGTGACGGTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1070,0.07545107,0.010934937,0.007654456,0.061782394,1829,4,T4,0.0,P025 +CGTTCTGAGGTAAACT.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,452,0.023837902,0.017878426,0.001191895,0.3444577,839,0,T0,0.0,P018 +CATCCACCATTCGACA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,495,0.08203125,0.041992188,0.0,0.265625,1024,2,T2,0.0,P001 +TACGGGCTCGGATGGA.01_YSS020_T_5,2.633767276,1,T,breast,R,Pre_treatment,Chemo,1,1076,0.025086505,0.05752595,0.001297578,0.18036333,2312,1,T1,2.633767276,P020 +GACACGCAGATCCCGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1624,0.03041825,0.016327443,0.002907627,0.31133974,4471,0,T0,0.0,P025 +TATGCCCAGATGTCGG.01_XLJ019_T_5,0.643499617,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1860,0.02929406,0.011365456,0.000480231,0.38290378,6247,1,T1,0.643499617,P019 +CGTGTAATCCGAACGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,546,0.023302939,0.01621074,0.006079027,0.24012157,987,0,T0,0.0,P019 +CACCACTTCTGTTTGT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1876,0.02985771,0.011896431,0.002332634,0.2316305,4287,4,T4,0.0,P002 +TTAGGACCAATCGGTT.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1286,0.04832377,0.059196617,0.000302024,0.16520688,3311,5,T5,0.0,P018 +CCTAGCTTCAGAGACG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1426,0.034291312,0.00751143,0.000653168,0.21162638,3062,3,T3,0.0,P019 +CGGTTAACAGGGTACA.02_ZFY017_T_5,0.0,2,T,lymph_node,NR,Post_treatment,anti-PDL1+Chemo,0,432,0.030013643,0.021828104,0.0,0.28785813,733,2,T2,0.0,P017 +TTGAACGGTAAGGGAA.01_WX016_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,869,0.045265038,0.005360334,0.001191185,0.2662299,1679,0,T0,0.0,P016 +TCAGCAAGTGCACTTA.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1817,0.057473823,0.009133438,0.0,0.17264424,4489,8,T8,0.0,P005 +GGGCACTAGGACATTA.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1594,0.060547296,0.010127128,0.002154708,0.29067013,4641,2,T2,0.0,P022 +GATCAGTAGCGATGAC.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,595,0.043844856,0.008431703,0.0,0.33136594,1186,6,T6,0.0,P007 +GATGCTACAATGTTGC.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,1726,0.022705993,0.004447565,0.000234082,0.16338952,4272,11,T11,0.0,P017 +GTGTGCGGTAAATACG.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1137,0.03226914,0.010298661,0.0,0.3044971,2913,0,T0,0.0,P012 +GTGTTAGAGTGGGCTA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1219,0.023413641,0.035290126,0.001017984,0.24804886,2947,6,T6,0.0,P019 +ATCCGAACAGACTCGC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,724,0.032863848,0.007042253,0.006259781,0.22143975,1278,7,T7,0.0,P019 +ACTATCTCACAAGCCC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1239,0.041821826,0.004583214,0.0,0.32569465,3491,2,T2,0.0,P005 +AACTCCCAGCCTCGTG.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,757,0.045618247,0.022809124,0.0,0.25930372,1666,5,T5,0.0,P012 +CTTAACTTCACCAGGC.01_ZJ005_T_5,1.023402944,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,1634,0.053804766,0.02024084,0.0,0.17755572,3903,8,T8,1.023402944,P005 +AACTCCCTCGAGCCCA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,553,0.041012216,0.009598604,0.0,0.39790577,1146,2,T2,0.0,P001 +CTGCTGTTCGTGGACC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1525,0.042894565,0.006221349,0.000327439,0.22134905,3054,0,T0,0.0,P023 +AGATTGCCATCGGAAG.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,925,0.060081467,0.005600815,0.0,0.2846232,1964,0,T0,0.0,P023 +GCATGATAGTTACGGG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,841,0.06386342,0.004426178,0.004110022,0.47613025,3163,1,T1,0.0,P022 +CCCTCCTTCCAGAGGA.01_LLY018_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,418,0.045911048,0.011477762,0.0,0.33572453,697,2,T2,0.0,P018 +GATTCAGAGATGAGAG.02_XLJ019_T_5,1.556969678,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1130,0.024390243,0.024390243,0.0,0.04498645,1845,3,T3,1.556969678,P019 +AGCCTAAAGCACAGGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1008,0.007722008,0.067567565,0.009009009,0.09009009,1554,4,T4,0.0,P025 +ACTTGTTCAAGCGCTC.01_YSS020_T_5,1.6433346,1,T,breast,R,Pre_treatment,Chemo,1,1268,0.015873017,0.014652015,0.0,0.15832315,2457,0,T0,1.6433346,P020 +GACAGAGGTAGCGCTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1189,0.028779253,0.030044276,0.000632511,0.20018975,3162,0,T0,0.0,P025 +CTCAGAATCCGCTGTT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,756,0.047642928,0.005015045,0.003009027,0.40471414,1994,5,T5,0.0,P025 +GTGGGTCCATCTATGG.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1140,0.03653613,0.00827614,0.0,0.497174,4954,2,T2,0.0,P023 +CGTAGGCCACCTATCC.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1205,0.051854394,0.010989011,0.0,0.26167583,2912,0,T0,0.0,P023 +TAAGCGTTCTCGGACG.01_WX016_T_5,2.313565546,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,995,0.019151846,0.028271774,0.0,0.18376653,2193,3,T3,2.313565546,P016 +CCACGGATCTGCTGTC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1288,0.05891771,0.038744796,0.0,0.21966058,3123,2,T2,0.0,P013 +AACCATGGTTCCGGCA.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,974,0.056822166,0.007716591,0.0,0.4152929,2851,1,T1,0.0,P012 +GATCTAGAGAAGGTTT.02_HLH023_T_5,1.859803295,2,T,breast,NR,Post_treatment,Chemo,1,1531,0.034822453,0.0419244,0.00137457,0.29965636,4365,7,T7,1.859803295,P023 +CCGGGATGTAGCTGCC.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1099,0.028375287,0.019221967,0.000915332,0.20183067,2185,11,T11,0.0,P013 +CTTACCGTCGTGGGAA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,677,0.05202822,0.009700176,0.004409171,0.17372134,1134,4,T4,0.0,P025 +CCTAGCTCAAGTCTAC.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,677,0.07137907,0.022869023,0.0,0.23284823,1443,2,T2,0.0,P001 +TGCCCATTCTAAGCCA.01_XLJ019_T_5,1.859880295,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1353,0.02414487,0.050301813,0.001341382,0.14822267,2982,3,T3,1.859880295,P019 +ATCTGCCAGGCACATG.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1755,0.021836229,0.0191067,0.001985112,0.14615385,4030,6,T6,0.0,P002 +CATCGGGAGGTGCTTT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,684,0.05753542,0.006011164,0.0,0.4534135,2329,2,T2,0.0,P013 +GCGAGAATCTGACCTC.02_HFR012_T_5,1.331192179,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1331,0.04967904,0.020653084,0.0,0.25481442,3583,7,T7,1.331192179,P012 +GTATTCTGTCGGATCC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1269,0.0602537,0.016384779,0.001849894,0.32293868,3784,2,T2,0.0,P025 +ATTGGTGGTGACGGTA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,2426,0.038231563,0.022830224,0.000724769,0.075375974,5519,3,T3,0.0,P020 +CTAGTGAGTGGCCCTA.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1137,0.0622431,0.005871991,0.0002936,0.3661186,3406,2,T2,0.0,P023 +GGGAGATCAAGACGTG.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,1064,0.030216414,0.011841568,0.0,0.18456513,2449,5,T5,0.0,P005 +TAAACCGGTGAGTGAC.01_ZJ005_T_5,0.0,1,T,liver,NR,Pre_treatment,anti-PDL1+Chemo,0,898,0.022252498,0.014532244,0.0,0.25567666,2202,0,T0,0.0,P005 +GCTTGAAAGTTGAGAT.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1578,0.035437144,0.008406621,0.0,0.4826694,7732,2,T2,0.0,P013 +CTACACCGTCCAACTA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,587,0.064020485,0.019206146,0.00256082,0.07042254,781,3,T3,0.0,P019 +CCGTACTTCACGCATA.02_XLJ019_T_5,1.640837144,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1083,0.0411224,0.08563135,0.0,0.042089984,2067,1,T1,1.640837144,P019 +GATGAAATCGCCATAA.01_XLJ019_T_5,2.488661489,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,690,0.036315322,0.031000886,0.00088574,0.20017715,1129,7,T7,2.488661489,P019 +TTTACTGGTCCAGTGC.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,920,0.053444676,0.005845511,0.00125261,0.3716075,2395,1,T1,0.0,P022 +GTCGTAACAATTCCTT.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1047,0.09112596,0.03912214,0.000954199,0.038645037,2096,4,T4,0.0,P023 +TCACAAGGTTCACCTC.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,796,0.034722224,0.036324788,0.002136752,0.26121795,1872,6,T6,0.0,P019 +AGCGTATGTACCGAGA.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1414,0.03685548,0.008896151,0.001270879,0.44880176,5508,1,T1,0.0,P022 +AAGACCTTCTGCCAGG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,462,0.024439918,0.0,0.0,0.4592668,982,1,T1,0.0,P007 +AGGGATGGTGCTCTTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2099,0.014393754,0.011466212,0.003415467,0.16589412,4099,4,T4,0.0,P025 +ACGAGGATCCACGTGG.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,745,0.020212766,0.03723404,0.0,0.35851064,1880,2,T2,0.0,P001 +TGACGGCCAAGCGTAG.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,765,0.067261904,0.007142857,0.0,0.25,1680,8,T8,0.0,P001 +CTGATCCTCTGTTGAG.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,815,0.048737522,0.021139165,0.001174398,0.27246037,1703,0,T0,0.0,P018 +GAACATCCAAAGTCAA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,973,0.038224414,0.092478424,0.001233046,0.038224414,1622,1,T1,0.0,P018 +GTTAAGCTCGGGAGTA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1458,0.033832643,0.040030994,0.000258264,0.20506199,3872,6,T6,0.0,P025 +CCTTCGATCGCGTAGC.01_LBH013_T_5,0.0,1,T,liver,R,Pre_treatment,Chemo,1,537,0.029445074,0.020385051,0.0,0.25594565,883,1,T1,0.0,P013 +CGATTGAAGACATAAC.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,893,0.032853566,0.001564456,0.0,0.54098874,3196,1,T1,0.0,P017 +CTCGTCAGTCTCCACT.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,637,0.04132901,0.002431118,0.001620746,0.29011345,1234,2,T2,0.0,P012 +TGTATTCGTTCTGTTT.03_LBH013_T_5,0.0,3,T,liver,R,Progression,Chemo,1,1530,0.099535845,0.019339865,0.0,0.25373903,3878,0,T0,0.0,P013 +CGGACGTGTGAGGGTT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1025,0.036726803,0.020618556,0.00128866,0.05347938,1552,4,T4,0.0,P002 +AATCGGTAGTACACCT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,807,0.0335277,0.017006803,0.001457726,0.20213799,2058,1,T1,0.0,P019 +AGCATACGTTGATTCG.01_XCY022_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1936,0.028926859,0.008693046,0.00029976,0.33243406,6672,12,T12,0.0,P022 +ACGAGCCGTATATCCG.01_JLR004_T_5,0.0,1,T,chest_wall,NR,Pre_treatment,anti-PDL1+Chemo,0,1020,0.07700312,0.024973985,0.0,0.16077003,1922,0,T0,0.0,P004 +AACCGCGAGCGATTCT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1499,0.098929614,0.009730781,0.001297438,0.14369121,3083,12,T12,0.0,P002 +CATCAAGAGCAGCCTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1670,0.03581546,0.02043707,0.008498584,0.23431809,4942,6,T6,0.0,P025 +ACCCACTTCGCTTGTC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,786,0.077634014,0.04805915,0.0,0.03142329,1623,0,T0,0.0,P023 +GATGCTAAGTGCCAGA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,692,0.039205156,0.004296456,0.0,0.51181525,1862,1,T1,0.0,P007 +CCCATACCACAGGCCT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,454,0.074527256,0.013348165,0.004449388,0.31256953,899,0,T0,0.0,P019 +CATTATCCAATGGAAT.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,845,0.02942841,0.032823995,0.001697793,0.25693265,1767,0,T0,0.0,P019 +CATCGGGGTCGCTTTC.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,469,0.0417802,0.000908265,0.0,0.44504994,1101,1,T1,0.0,P007 +TCAACGATCGCGCCAA.01_XLJ019_T_5,0.932428871,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1260,0.061061677,0.019944768,0.002761583,0.28106782,3259,6,T6,0.932428871,P019 +AGGGATGCAAGGCTCC.02_ZJ005_T_5,0.0,2,T,liver,NR,Post_treatment,anti-PDL1+Chemo,0,948,0.028870292,0.014644352,0.0,0.3046025,2390,12,T12,0.0,P005 +GGCAATTTCAACACCA.02_LLY018_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,454,0.058992807,0.017266188,0.001438849,0.2532374,695,3,T3,0.0,P018 +AGAGTGGGTTGTGGCC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1215,0.05421995,0.022506393,0.006138107,0.08695652,1955,4,T4,0.0,P025 +CTTCTCTCACGGATAG.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,568,0.023030303,0.001818182,0.0,0.54121214,1650,1,T1,0.0,P007 +GTACTCCCAAAGTCAA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1624,0.040811773,0.009589653,0.001561106,0.24509367,4484,1,T1,0.0,P019 +TTGTAGGGTATCGCAT.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1210,0.057273768,0.002863688,0.001431844,0.30441007,3492,2,T2,0.0,P022 +CTTCTCTTCACGACTA.02_WYP025_T_5,2.810121798,2,T,breast,NR,Post_treatment,Chemo,1,1807,0.02459815,0.06015587,0.000974184,0.16074038,4106,7,T7,2.810121798,P025 +CGGACTGAGTTCGATC.02_HLH023_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1463,0.034029037,0.01724138,0.00022686,0.2751815,4408,12,T12,0.0,P023 +GGCGTGTCAATGGAGC.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,682,0.011682243,0.005841122,0.002336449,0.07359813,856,4,T4,0.0,P012 +CTGGTCTTCAGGTTCA.01_HLH023_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,957,0.06302916,0.008936971,0.000470367,0.2681091,2126,12,T12,0.0,P023 +CTACGTCTCCGGGTGT.02_LCL002_T_5,0.0,2,T,chest_wall,NR,Post_treatment,anti-PDL1+Chemo,0,1322,0.03708566,0.019035116,0.000984575,0.28585494,3047,12,T12,0.0,P002 +ATTATCCAGCGATAGC.01_YSS020_T_5,0.666876239,1,T,breast,R,Pre_treatment,Chemo,1,2893,0.030086812,0.011059579,0.001189202,0.101795696,8409,3,T3,0.666876239,P020 +CGGACTGAGAGTCGGT.02_HFR012_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,633,0.07056145,0.016691957,0.000758725,0.19271624,1318,8,T8,0.0,P012 +TTGCCGTCAACGATCT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1202,0.010382514,0.02021858,0.006557377,0.06393442,1830,4,T4,0.0,P025 +CAGTCCTGTACCGAGA.01_XLJ019_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,1019,0.028812056,0.060283687,0.003546099,0.24822696,2256,6,T6,0.0,P019 +GAAATGAAGTGTGGCA.02_CLR001_T_5,0.0,2,T,chest_wall,NR,Post_treatment,Chemo,1,490,0.05319149,0.026595745,0.0,0.24255319,940,2,T2,0.0,P001 +CGACCTTCACACATGT.02_LBH013_T_5,1.950642323,2,T,liver,R,Post_treatment,Chemo,1,1991,0.024883028,0.012122501,0.000425351,0.19076988,4702,0,T0,1.950642323,P013 +CGATGTATCGTAGGAG.02_XLJ019_T_5,0.0,2,T,lymph_node,R,Post_treatment,anti-PDL1+Chemo,0,1661,0.04586039,0.003449675,0.000608766,0.36181006,4928,4,T4,0.0,P019 +GTGCGGTCATGTTGAC.02_LBH013_T_5,0.0,2,T,liver,R,Post_treatment,Chemo,1,1119,0.06196054,0.009247842,0.0,0.32398275,3244,8,T8,0.0,P013 +GCCTCTAAGATGCCAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1593,0.030513918,0.017398287,0.001070664,0.25107068,3736,5,T5,0.0,P025 +ATGTGTGTCTCATTCA.01_DXJ007_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,822,0.027339643,0.004206099,0.0,0.552401,2853,1,T1,0.0,P007 +CATATTCTCCGAGCCA.02_LLY018_T_5,1.858700205,2,T,breast,NR,Post_treatment,Chemo,1,956,0.036918137,0.033707865,0.000401284,0.2953451,2492,2,T2,1.858700205,P018 +GACGGCTAGGTTCCTA.01_ZFY017_T_5,0.0,1,T,lymph_node,NR,Pre_treatment,anti-PDL1+Chemo,0,1082,0.038813885,0.003616201,0.0,0.4990357,4148,1,T1,0.0,P017 +GACTAACGTCTGGAGA.01_HFR012_T_5,0.0,1,T,lymph_node,R,Pre_treatment,anti-PDL1+Chemo,0,670,0.053747162,0.003785011,0.000757002,0.330053,1321,3,T3,0.0,P012 +ATCATCTAGGCCCTTG.03_LBH013_T_5,1.594292623,3,T,liver,R,Progression,Chemo,1,1506,0.057104915,0.005843293,0.0,0.28499335,3765,8,T8,1.594292623,P013 +TACGGGCTCAAGGCTT.02_XCY022_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,2196,0.044711757,0.005674081,0.000907853,0.16318657,4406,4,T4,0.0,P022 +CCTATTAGTTGATTCG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,968,0.053564236,0.012082159,0.001208216,0.33064842,2483,2,T2,0.0,P025 diff --git a/flask_backend/models/BreastCancer_SVM_v1/test_script.py b/flask_backend/models/BreastCancer_SVM_v1/test_script.py new file mode 100644 index 00000000..98263ca0 --- /dev/null +++ b/flask_backend/models/BreastCancer_SVM_v1/test_script.py @@ -0,0 +1,64 @@ +import pandas as pd +import numpy as np +import joblib +from sklearn.preprocessing import OneHotEncoder +from argparse import ArgumentParser + +parser = ArgumentParser() +parser.add_argument("--input", type=str, required=True) +parser.add_argument("--model", type=str, required=True) +args = parser.parse_args() + +FEATURE_COLS = [ + "Expression", "nGene", "percent_mito", "percent_hsp", + "percent_ig", "percent_rp", "nUMI", "PDCD1" +] +CHEMO_FEATURE_COLS = ["Expression", "Origin_breast", "Origin_liver", "nGene", "percent_mito", "percent_hsp", "percent_ig", "percent_rp", "nUMI", "PDCD1"] +COMBO_FEATURE_COLS = ["Expression", 'Origin_chest_wall', 'Origin_liver','Origin_lymph_node', "nGene", "percent_mito", "percent_hsp", "percent_ig", "percent_rp", "nUMI", "PDCD1"] + +model = joblib.load(args.model) + +def run_prediction(df: pd.DataFrame) -> dict: + + # 1️⃣ Handle timeline safely + if "Timeline" in df.columns: + df = df[df["Timeline"] == "Pre_treatment"].copy() + + # 2️⃣ Keep required columns + df = df[FEATURE_COLS + ["Origin"]].copy() + + # 3️⃣ One-hot encode Origin + encoder = OneHotEncoder(sparse_output=False, handle_unknown="ignore") + origin_encoded = encoder.fit_transform(df[["Origin"]]) + origin_df = pd.DataFrame( + origin_encoded, + columns=encoder.get_feature_names_out(["Origin"]) + ) + + df = pd.concat([df.drop(columns=["Origin"]).reset_index(drop=True), + origin_df.reset_index(drop=True)], axis=1) + + results = {} + + # ====================== + # MODEL SELECTION + # ====================== + if args.model == "chemo_model.pkl": + X = df.reindex(columns=CHEMO_FEATURE_COLS, fill_value=0) + elif args.model == "combo_model.pkl": + X = df.reindex(columns=COMBO_FEATURE_COLS, fill_value=0) + + preds = model.predict(X) + rate = np.mean(preds) * 100 + + return round(rate, 2) + +if __name__ == "__main__": + + input_path = args.input + df = pd.read_csv(input_path) + percentage = run_prediction(df) + print(f"Response Percentage: {percentage}") + + + \ No newline at end of file diff --git a/flask_backend/models/BreastCancer_SVM_v1/testset_P020.csv b/flask_backend/models/BreastCancer_SVM_v1/testset_P020.csv new file mode 100644 index 00000000..fb4d90e6 --- /dev/null +++ b/flask_backend/models/BreastCancer_SVM_v1/testset_P020.csv @@ -0,0 +1,84 @@ +Identifier,Expression,group,Tissue,Origin,Response,Timeline,Treatment,batch,nGene,percent_mito,percent_hsp,percent_ig,percent_rp,nUMI,myleiden,defcls,PDCD1,Patient_code +GCACATAGTGCTGTAT.01_YSS020_T_5,2.073070752,1,T,breast,R,Pre_treatment,Chemo,1,1543,0.02835298,0.01943294,0.000318573,0.1557821,3139,3,T3,2.073070752,P020 +TTTGCGCGTAAAGGAG.01_YSS020_T_5,1.500021646,1,T,breast,R,Pre_treatment,Chemo,1,1427,0.026686434,0.02779837,0.000370645,0.15567087,2698,3,T3,1.500021646,P020 +CTACACCCATCGGACC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1155,0.034995977,0.023330651,0.000402253,0.16251005,2486,0,T0,0.0,P020 +CGACTTCGTTCGGGCT.01_YSS020_T_5,2.579119285,1,T,breast,R,Pre_treatment,Chemo,1,1100,0.01830986,0.019248826,0.0,0.18544601,2130,3,T3,2.579119285,P020 +CCTAAAGCAGAGCCAA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1198,0.04395177,0.01672501,0.000777907,0.20108907,2571,3,T3,0.0,P020 +TCAGGTAAGTCCAGGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,999,0.031793345,0.020864382,0.001490313,0.1987084,2013,3,T3,0.0,P020 +TCGCGTTTCCGTTGCT.01_YSS020_T_5,2.666989274,1,T,breast,R,Pre_treatment,Chemo,1,988,0.016016016,0.004004004,0.0,0.15315315,1998,5,T5,2.666989274,P020 +AACTCAGGTGATGTGG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,851,0.020460358,0.006393862,0.000639386,0.23657289,1564,3,T3,0.0,P020 +TGGTTAGTCTTACCGC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,897,0.034520548,0.019726027,0.00109589,0.2290411,1825,6,T6,0.0,P020 +TGCGGGTAGAGTACCG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1417,0.025504151,0.011862396,0.00029656,0.27698696,3372,3,T3,0.0,P020 +CGCCAAGTCCCAAGAT.01_YSS020_T_5,1.464769241,1,T,breast,R,Pre_treatment,Chemo,1,1490,0.029973553,0.02145166,0.00176315,0.18424919,3403,3,T3,1.464769241,P020 +ATTTCTGGTCGGCTCA.01_YSS020_T_5,1.836199893,1,T,breast,R,Pre_treatment,Chemo,1,1837,0.043323018,0.008093311,0.001428231,0.16829327,4201,3,T3,1.836199893,P020 +GGGCATCTCTGGTATG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1059,0.011930586,0.01626898,0.000542299,0.14154013,1844,3,T3,0.0,P020 +ATGTGTGTCATACGGT.01_YSS020_T_5,2.123017557,1,T,breast,R,Pre_treatment,Chemo,1,2647,0.09892971,0.019236332,0.000578536,0.112814575,6914,7,T7,2.123017557,P020 +GAAATGAGTTGTGGCC.02_YSS020_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,609,0.038607117,0.003785011,0.0,0.34973505,1321,6,T6,0.0,P020 +CTACACCCACACTGCG.02_YSS020_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,1014,0.050036523,0.008400292,0.0,0.29620162,2738,0,T0,0.0,P020 +CATATGGAGGGTCTCC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,617,0.062311556,0.017085427,0.004020101,0.021105528,995,11,T11,0.0,P020 +AAGGCAGAGGCAAAGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1992,0.010343482,0.04781421,0.00058548,0.1362217,5124,5,T5,0.0,P020 +GCTTGAAAGTTAGGTA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,984,0.04822182,0.009644364,0.001808318,0.015069319,1659,5,T5,0.0,P020 +CGAGCCACATCATCCC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1368,0.033950616,0.006858711,0.000685871,0.19170097,2916,3,T3,0.0,P020 +ACGATGTTCGAGAGCA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1605,0.043339152,0.00814427,0.0,0.16055846,3438,3,T3,0.0,P020 +AACACGTAGAACAACT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1911,0.027704168,0.003613587,0.000963623,0.18525657,4151,3,T3,0.0,P020 +CTGCTGTGTGAGGCTA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1632,0.018424397,0.006670902,0.000635324,0.16486658,3148,3,T3,0.0,P020 +GCTGCGACAAGCTGAG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1374,0.020792468,0.025500197,0.001569243,0.11573166,2549,3,T3,0.0,P020 +GGATGTTGTCTAAAGA.01_YSS020_T_5,0.787272303,1,T,breast,R,Pre_treatment,Chemo,1,2592,0.039087493,0.019335095,0.003477535,0.13506746,7189,3,T3,0.787272303,P020 +TTCGAAGCAACGATGG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1174,0.04709648,0.014631916,0.001371742,0.12665752,2187,3,T3,0.0,P020 +AGGCCACCAGCAGTTT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,2690,0.019307483,0.014360938,0.000478698,0.08345301,6267,3,T3,0.0,P020 +CTAAGACCAATGGACG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1586,0.00984366,0.023451071,0.000579039,0.14765489,3454,3,T3,0.0,P020 +ACGGAGATCTCGATGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1350,0.027180405,0.002986858,0.000896057,0.34229392,3348,1,T1,0.0,P020 +CCGGTAGGTCAAACTC.01_YSS020_T_5,1.851847392,1,T,breast,R,Pre_treatment,Chemo,1,1766,0.031640913,0.024282562,0.000735835,0.244052,4077,3,T3,1.851847392,P020 +ATCCACCTCAGAGGTG.01_YSS020_T_5,1.709742397,1,T,breast,R,Pre_treatment,Chemo,1,1211,0.017964073,0.03512974,0.001596806,0.15528943,2505,5,T5,1.709742397,P020 +GTTAAGCAGGCTACGA.02_YSS020_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,724,0.03441011,0.002808989,0.001404494,0.24648876,1424,0,T0,0.0,P020 +GACACGCGTACGAAAT.01_YSS020_T_5,1.245482026,1,T,breast,R,Pre_treatment,Chemo,1,1496,0.017131243,0.004065041,0.0014518,0.19512194,3444,3,T3,1.245482026,P020 +ATGTGTGCAATCGGTT.01_YSS020_T_5,2.077769983,1,T,breast,R,Pre_treatment,Chemo,1,1525,0.039137132,0.01633282,0.000616333,0.13898306,3245,3,T3,2.077769983,P020 +AGACGTTCATTGCGGC.01_YSS020_T_5,2.340607989,1,T,breast,R,Pre_treatment,Chemo,1,1216,0.04710821,0.05130597,0.000932836,0.013992538,2144,3,T3,2.340607989,P020 +TGACGGCCATACGCCG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,821,0.02667628,0.008651766,0.000720981,0.1888969,1387,3,T3,0.0,P020 +GTTACAGTCACCACCT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1631,0.028993588,0.006690828,0.000278785,0.14608307,3587,3,T3,0.0,P020 +TAAACCGTCTGTCTAT.01_YSS020_T_5,3.391605361,1,T,breast,R,Pre_treatment,Chemo,1,1147,0.050655812,0.038896427,0.0,0.13161466,2211,3,T3,3.391605361,P020 +TTCTCAATCACCACCT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1212,0.012388695,0.026713124,0.000387147,0.1606659,2583,5,T5,0.0,P020 +CTGCCTATCTATCCCG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,2760,0.026613029,0.011449792,0.000309454,0.104595385,6463,5,T5,0.0,P020 +CGTCACTAGTATCGAA.01_YSS020_T_5,1.418369131,1,T,breast,R,Pre_treatment,Chemo,1,1532,0.028705148,0.026209049,0.00124805,0.14914197,3205,3,T3,1.418369131,P020 +ATGAGGGAGGCCATAG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1873,0.029989384,0.019639065,0.000265393,0.11518047,3768,5,T5,0.0,P020 +CGGACTGGTGATGTGG.01_YSS020_T_5,1.743347984,1,T,breast,R,Pre_treatment,Chemo,1,1955,0.03283302,0.008677298,0.001172608,0.15079737,4264,3,T3,1.743347984,P020 +CAACCAATCGTCACGG.01_YSS020_T_5,1.787082216,1,T,breast,R,Pre_treatment,Chemo,1,1142,0.005008347,0.038397327,0.000417362,0.17946577,2396,12,T12,1.787082216,P020 +CTCACACAGGCGCTCT.01_YSS020_T_5,2.260323674,1,T,breast,R,Pre_treatment,Chemo,1,858,0.04868421,0.011842106,0.0,0.15065789,1520,3,T3,2.260323674,P020 +GACACGCGTATTCGTG.01_YSS020_T_5,1.507960676,1,T,breast,R,Pre_treatment,Chemo,1,2855,0.025701584,0.01486524,0.000277855,0.07140873,7198,5,T5,1.507960676,P020 +CTGCCTACACAGGTTT.01_YSS020_T_5,2.648399924,1,T,breast,R,Pre_treatment,Chemo,1,2092,0.01855163,0.025480554,0.000670541,0.12494412,4474,3,T3,2.648399924,P020 +CGTCCATGTTATCCGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1266,0.031996395,0.007210455,0.000901307,0.13474537,2219,3,T3,0.0,P020 +CAGTCCTAGTATCTCG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1410,0.030371204,0.009748781,0.001874766,0.1616048,2667,6,T6,0.0,P020 +CAGAGAGCACCAACCG.01_YSS020_T_5,2.038026181,1,T,breast,R,Pre_treatment,Chemo,1,1471,0.020687802,0.040569585,0.0,0.20069855,3722,3,T3,2.038026181,P020 +CGTTGGGAGGTGATTA.01_YSS020_T_5,3.02170997,1,T,breast,R,Pre_treatment,Chemo,1,2436,0.028616352,0.027515722,0.000943396,0.10660377,6360,5,T5,3.02170997,P020 +GAGCAGAGTAGCGCTC.01_YSS020_T_5,1.774638788,1,T,breast,R,Pre_treatment,Chemo,1,1183,0.02172196,0.005134281,0.000394945,0.14494471,2532,3,T3,1.774638788,P020 +TCGTACCGTCTTCGTC.01_YSS020_T_5,3.612536064,1,T,breast,R,Pre_treatment,Chemo,1,835,0.036645964,0.005590062,0.0,0.17453416,1610,3,T3,3.612536064,P020 +ATCATCTAGGGATGGG.01_YSS020_T_5,1.906185337,1,T,breast,R,Pre_treatment,Chemo,1,1088,0.030333167,0.012928891,0.002486325,0.15514669,2011,3,T3,1.906185337,P020 +ACGAGCCTCAGCTGGC.01_YSS020_T_5,3.709921786,1,T,breast,R,Pre_treatment,Chemo,1,1728,0.01521112,0.040125884,0.000524521,0.14896408,3813,7,T7,3.709921786,P020 +TAAGTGCTCTTGTTTG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1142,0.045069166,0.008478357,0.000446229,0.13877733,2241,5,T5,0.0,P020 +ATTGGTGGTCAGGACA.01_YSS020_T_5,1.371242035,1,T,breast,R,Pre_treatment,Chemo,1,1653,0.024488531,0.04215747,0.000619963,0.15964042,3226,3,T3,1.371242035,P020 +TAGACCACAGCATGAG.01_YSS020_T_5,2.083182481,1,T,breast,R,Pre_treatment,Chemo,1,1568,0.024539877,0.008282209,0.000306748,0.15276073,3260,3,T3,2.083182481,P020 +CCGTGGAGTAAACCTC.01_YSS020_T_5,2.16958014,1,T,breast,R,Pre_treatment,Chemo,1,909,0.024048096,0.01002004,0.005344022,0.17301269,1497,3,T3,2.16958014,P020 +GAACGGAGTATAATGG.02_YSS020_T_5,0.0,2,T,breast,R,Post_treatment,Chemo,1,558,0.07298578,0.008530806,0.003791469,0.3014218,1055,3,T3,0.0,P020 +CCTCAGTTCTTGGGTA.01_YSS020_T_5,1.634424929,1,T,breast,R,Pre_treatment,Chemo,1,2773,0.028025145,0.02187009,0.000392876,0.19316396,7636,7,T7,1.634424929,P020 +TGTTCCGCATAAAGGT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1174,0.026224451,0.004242191,0.0,0.1731585,2593,5,T5,0.0,P020 +CCATGTCTCTAGAGTC.01_YSS020_T_5,1.974915931,1,T,breast,R,Pre_treatment,Chemo,1,2125,0.034382284,0.014180264,0.00019425,0.13791764,5148,3,T3,1.974915931,P020 +TGCTACCCACAGAGGT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1275,0.032309532,0.005584364,0.0,0.18348624,2507,7,T7,0.0,P020 +ACTGAGTTCAGTTCGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1146,0.025620496,0.008006405,0.001200961,0.21056846,2498,3,T3,0.0,P020 +ATTATCCTCATGTGGT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,2888,0.03792368,0.006281109,0.0,0.12040768,8438,5,T5,0.0,P020 +CGTGTCTAGTCTCGGC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1148,0.01930693,0.008910891,0.001485149,0.14059407,2020,3,T3,0.0,P020 +CGTAGCGGTCCAACTA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1590,0.05770751,0.023978919,0.001581028,0.17417654,3795,6,T6,0.0,P020 +CCGTACTCATGCCCGA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,866,0.036797933,0.0058102,0.000645578,0.13557133,1549,3,T3,0.0,P020 +CGGACACGTTACAGAA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,2025,0.027524753,0.028316831,0.000792079,0.16950496,5050,6,T6,0.0,P020 +CGATGTAAGATGTCGG.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1301,0.04700253,0.005066142,0.0,0.31663382,3553,1,T1,0.0,P020 +CGTGTCTGTCACCTAA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1184,0.05112316,0.018977536,0.000387297,0.21843532,2582,11,T11,0.0,P020 +CTCGAGGTCAAAGACA.01_YSS020_T_5,3.107596989,1,T,breast,R,Pre_treatment,Chemo,1,2064,0.03776824,0.012875536,0.003218884,0.14291845,4660,3,T3,3.107596989,P020 +GGCTGGTCAGTCCTTC.01_YSS020_T_5,1.222282274,1,T,breast,R,Pre_treatment,Chemo,1,1770,0.021457966,0.014991182,0.002351558,0.10699589,3402,5,T5,1.222282274,P020 +TGGGCGTCATGACATC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,711,0.033519555,0.0103751,0.002394254,0.1660016,1253,3,T3,0.0,P020 +GTATCTTCAGGTGGAT.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1375,0.022107081,0.014507772,0.000690846,0.16062176,2895,7,T7,0.0,P020 +TAGCCGGAGAGATGAG.01_YSS020_T_5,3.559425985,1,T,breast,R,Pre_treatment,Chemo,1,1258,0.02763316,0.012014417,0.001601922,0.16259511,2497,3,T3,3.559425985,P020 +AAAGCAAAGCGTGTCC.01_YSS020_T_5,2.396625644,1,T,breast,R,Pre_treatment,Chemo,1,1281,0.023983316,0.011817866,0.000347584,0.1904762,2877,3,T3,2.396625644,P020 +CGTGTAATCATAGCAC.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,1082,0.028289178,0.061068702,0.053435113,0.13920072,2227,6,T6,0.0,P020 +TACGGGCTCGGATGGA.01_YSS020_T_5,2.633767276,1,T,breast,R,Pre_treatment,Chemo,1,1076,0.025086505,0.05752595,0.001297578,0.18036333,2312,1,T1,2.633767276,P020 +ACTTGTTCAAGCGCTC.01_YSS020_T_5,1.6433346,1,T,breast,R,Pre_treatment,Chemo,1,1268,0.015873017,0.014652015,0.0,0.15832315,2457,0,T0,1.6433346,P020 +ATTGGTGGTGACGGTA.01_YSS020_T_5,0.0,1,T,breast,R,Pre_treatment,Chemo,1,2426,0.038231563,0.022830224,0.000724769,0.075375974,5519,3,T3,0.0,P020 +ATTATCCAGCGATAGC.01_YSS020_T_5,0.666876239,1,T,breast,R,Pre_treatment,Chemo,1,2893,0.030086812,0.011059579,0.001189202,0.101795696,8409,3,T3,0.666876239,P020 diff --git a/flask_backend/models/BreastCancer_SVM_v1/testset_P025.csv b/flask_backend/models/BreastCancer_SVM_v1/testset_P025.csv new file mode 100644 index 00000000..c8b39918 --- /dev/null +++ b/flask_backend/models/BreastCancer_SVM_v1/testset_P025.csv @@ -0,0 +1,175 @@ +Identifier,Expression,group,Tissue,Origin,Response,Timeline,Treatment,batch,nGene,percent_mito,percent_hsp,percent_ig,percent_rp,nUMI,myleiden,defcls,PDCD1,Patient_code +CCGGTAGAGCTCCCAG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,429,0.047540985,0.027868852,0.029508196,0.17213115,610,4,T4,0.0,P025 +GACTACACAAGACGTG.02_WYP025_T_5,0.871290604,2,T,breast,NR,Post_treatment,Chemo,1,2452,0.023857936,0.027653517,0.000271113,0.12755863,7377,5,T5,0.871290604,P025 +AGATTGCGTACTTGAC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,3248,0.019988578,0.031753283,0.001827527,0.13203883,8755,4,T4,0.0,P025 +GAGGTGAGTTGATTGC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1380,0.02157032,0.043428242,0.001438021,0.21886684,3477,0,T0,0.0,P025 +AAGGTTCGTCGGCACT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1192,0.037495814,0.015065283,0.001004352,0.30733177,2987,6,T6,0.0,P025 +CTTTGCGGTAGGCTGA.02_WYP025_T_5,0.913211249,2,T,breast,NR,Post_treatment,Chemo,1,1542,0.037293106,0.006075843,0.000628536,0.3555416,4773,1,T1,0.913211249,P025 +ACGGCCACAGGGCATA.02_WYP025_T_5,1.007307236,2,T,breast,NR,Post_treatment,Chemo,1,1540,0.034590438,0.009848666,0.001441268,0.25798702,4163,6,T6,1.007307236,P025 +GTTCTCGCACTGTTAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1075,0.03180354,0.01489533,0.005233495,0.28542674,2484,7,T7,0.0,P025 +CTTACCGGTCGCGGTT.01_WYP025_T_5,1.061751123,1,T,breast,NR,Pre_treatment,Chemo,1,2588,0.017264726,0.029451592,0.005247123,0.11323629,5908,4,T4,1.061751123,P025 +TATTACCTCGTTTATC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,413,0.01305483,0.006527415,0.002610966,0.2767624,766,5,T5,0.0,P025 +GAAGCAGCAAATCCGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1621,0.03647587,0.020482603,0.00701459,0.22025813,3564,4,T4,0.0,P025 +GGTGAAGCAGGCAGTA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1411,0.024504693,0.011991658,0.000260688,0.27267987,3836,0,T0,0.0,P025 +CAGCTGGCAAAGCAAT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1567,0.02564895,0.042336218,0.00092707,0.15327565,3236,5,T5,0.0,P025 +ACGCAGCGTAGCGCAA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2248,0.03423733,0.020370597,0.001472573,0.34102345,8149,1,T1,0.0,P025 +ATCCGAAAGCGTCAAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,861,0.07472385,0.003898636,0.003248863,0.22547108,1539,5,T5,0.0,P025 +AATCCAGTCACCGGGT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1213,0.026524391,0.013719512,0.00152439,0.3054878,3280,5,T5,0.0,P025 +CATGACAAGCAGACTG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1114,0.07295976,0.016923655,0.010530274,0.25084618,2659,6,T6,0.0,P025 +AAAGTAGAGCGCCTTG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,911,0.036044363,0.014325324,0.002310536,0.35027727,2164,1,T1,0.0,P025 +TCGGGACGTCTAGCGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,779,0.047479913,0.015339664,0.003652301,0.26661798,1369,0,T0,0.0,P025 +CATATTCCAGCTGTTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2609,0.038547073,0.032616753,0.07614106,0.23943663,9443,6,T6,0.0,P025 +ATCACGAAGCTCTCGG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1043,0.039686974,0.014812744,0.000838457,0.39826718,3578,1,T1,0.0,P025 +TTGACTTGTATAGGTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,776,0.019766398,0.04222821,0.013477089,0.0754717,1113,4,T4,0.0,P025 +CACACAACAACGCACC.02_WYP025_T_5,1.244817948,2,T,breast,NR,Post_treatment,Chemo,1,1241,0.04714912,0.016812865,0.005847953,0.24524854,2736,7,T7,1.244817948,P025 +CAGAGAGGTATATGAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,929,0.050717212,0.039959017,0.002561475,0.17008197,1952,1,T1,0.0,P025 +AGCTTGAGTGTGCGTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1975,0.024981217,0.022539444,0.000563486,0.17129977,5324,5,T5,0.0,P025 +CTCGGAGCAGTCACTA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1022,0.069418386,0.009380863,0.008130081,0.04252658,1599,3,T3,0.0,P025 +GCCTCTAGTCAGAGGT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1977,0.020490928,0.01430096,0.000853789,0.17588048,4685,6,T6,0.0,P025 +TGTGTTTAGAACAACT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1624,0.06703214,0.032145526,0.000996761,0.18066284,4013,0,T0,0.0,P025 +ACGCCGACATTTGCCC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1068,0.07032967,0.052197803,0.005494506,0.055494506,1820,4,T4,0.0,P025 +TGACTAGTCATCTGTT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,3882,0.027802166,0.033728417,0.001170618,0.13776705,13668,4,T4,0.0,P025 +TACTTACGTCAGTGGA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1385,0.0553427,0.04129417,0.008514262,0.058748405,2349,4,T4,0.0,P025 +ACGCCAGTCTCGGACG.02_WYP025_T_5,1.052126629,2,T,breast,NR,Post_treatment,Chemo,1,1382,0.022341376,0.008936551,0.0,0.20524278,3357,3,T3,1.052126629,P025 +AACTCCCGTTGCCTCT.02_WYP025_T_5,1.146761545,2,T,breast,NR,Post_treatment,Chemo,1,1296,0.027959548,0.03420583,0.001189768,0.2117787,3362,0,T0,1.146761545,P025 +GGACAGACAGCTGCTG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1291,0.03718638,0.055107526,0.003584229,0.08512545,2232,0,T0,0.0,P025 +CACACTCGTACCATCA.02_WYP025_T_5,1.419705502,2,T,breast,NR,Post_treatment,Chemo,1,1617,0.018159807,0.017675545,0.000726392,0.262954,4130,7,T7,1.419705502,P025 +TTCGGTCGTGGTTTCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,975,0.024033045,0.03379647,0.001126549,0.36312428,2663,2,T2,0.0,P025 +TCAACGATCCGTTGTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1391,0.02676399,0.046634227,0.00648824,0.0567721,2466,4,T4,0.0,P025 +TCCCGATTCCGCATCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1142,0.034507044,0.022183098,0.002112676,0.27922535,2840,6,T6,0.0,P025 +CGAGAAGCACTGCCAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,822,0.018627452,0.02990196,0.001470588,0.25833333,2040,0,T0,0.0,P025 +AGTGGGAAGCCCAACC.01_WYP025_T_5,1.357923512,1,T,breast,NR,Pre_treatment,Chemo,1,4026,0.015073181,0.031238623,0.001601981,0.12364378,13733,4,T4,1.357923512,P025 +GTCTCGTCATGACATC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1498,0.015272033,0.052179445,0.003499841,0.05886096,3143,4,T4,0.0,P025 +GCTGCTTGTCAGAGGT.02_WYP025_T_5,0.895473413,2,T,breast,NR,Post_treatment,Chemo,1,1668,0.025243688,0.011247188,0.001499625,0.19395152,4001,6,T6,0.895473413,P025 +CGGGTCAGTTATGTGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1428,0.035386633,0.020532984,0.007426824,0.06116208,2289,4,T4,0.0,P025 +GACGTGCAGATATACG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,990,0.027484143,0.00422833,0.001761804,0.41437632,2838,1,T1,0.0,P025 +GACGCGTTCCAGATCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1216,0.044226874,0.053004727,0.002363268,0.20695476,2962,7,T7,0.0,P025 +TAAGCGTGTCAGATAA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1003,0.059065934,0.004807693,0.010302198,0.086538464,1456,4,T4,0.0,P025 +GGCAATTAGTCCGGTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1581,0.011556241,0.03081664,0.008089368,0.057395995,2596,4,T4,0.0,P025 +TAGTTGGGTCCGAAGA.02_WYP025_T_5,0.775709157,2,T,breast,NR,Post_treatment,Chemo,1,1831,0.030014489,0.009521838,0.0,0.23225005,4831,5,T5,0.775709157,P025 +GGATTACCAGCTGTAT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1075,0.02082221,0.038974907,0.008008543,0.085958354,1873,4,T4,0.0,P025 +GTACGTAGTGGGTATG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1698,0.020840693,0.007771106,0.004238785,0.13422818,2831,4,T4,0.0,P025 +GATGCTACACTAGTAC.02_WYP025_T_5,2.368313192,2,T,breast,NR,Post_treatment,Chemo,1,1809,0.025566107,0.01120039,0.00146092,0.21865109,4107,7,T7,2.368313192,P025 +TTTCCTCAGGTCATCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1128,0.03545832,0.041870993,0.001131648,0.26254243,2651,1,T1,0.0,P025 +CTACCCAGTACATCCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1571,0.028756477,0.038601037,0.001295337,0.21761657,3860,2,T2,0.0,P025 +CTAACTTCAGACGCCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,953,0.098410755,0.003056235,0.003667482,0.13080685,1636,7,T7,0.0,P025 +CAAGTTGTCGTACGGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1176,0.028383173,0.04054739,0.010136847,0.07704004,1973,4,T4,0.0,P025 +CAACCTCGTATGCTTG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2482,0.04701931,0.09756507,0.004869857,0.045004196,5955,4,T4,0.0,P025 +GCGAGAACACATTCGA.02_WYP025_T_5,1.709367605,2,T,breast,NR,Post_treatment,Chemo,1,1826,0.04197901,0.02655815,0.001070893,0.18869136,4669,3,T3,1.709367605,P025 +CACCACTCAATTGCTG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1023,0.050466496,0.010178117,0.002544529,0.23409669,2358,0,T0,0.0,P025 +GGATTACTCATGGTCA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2160,0.027924294,0.028234564,0.002637294,0.2998759,6446,4,T4,0.0,P025 +ACGGCCAGTCGATTGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2743,0.014865542,0.037915483,0.002672457,0.07917154,5987,4,T4,0.0,P025 +CTTTGCGCAGATGAGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,932,0.051819865,0.041949414,0.006785935,0.059222702,1621,4,T4,0.0,P025 +AGGGAGTCACCATCCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,612,0.0251938,0.029069768,0.0,0.17829457,1032,0,T0,0.0,P025 +CTTACCGCAGACACTT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1123,0.02592726,0.005041412,0.002520706,0.2574721,2777,0,T0,0.0,P025 +TGACAACTCTGCCCTA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,714,0.0910556,0.05479452,0.0,0.034649476,1241,0,T0,0.0,P025 +AGAGTGGCACACCGCA.02_WYP025_T_5,0.765572063,2,T,breast,NR,Post_treatment,Chemo,1,1919,0.020463562,0.02025475,0.0,0.17707245,4789,5,T5,0.765572063,P025 +CCTCTGAAGAGCTGGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1433,0.032666393,0.038383015,0.003674969,0.07064108,2449,4,T4,0.0,P025 +CGAGCACAGTTAGGTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1083,0.01786778,0.029779632,0.002977963,0.055390112,1679,4,T4,0.0,P025 +ACATGGTCAATGTAAG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1374,0.032796,0.07726515,0.003891051,0.20511395,3598,0,T0,0.0,P025 +GCGCGATAGCTATGCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1031,0.03543454,0.01380082,0.001491981,0.29765013,2681,1,T1,0.0,P025 +GGCTCGAGTTCCACGG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,749,0.06818182,0.04195804,0.01048951,0.049825177,1144,4,T4,0.0,P025 +CATCAAGGTACCGAGA.02_WYP025_T_5,2.017076677,2,T,breast,NR,Post_treatment,Chemo,1,1091,0.028348397,0.025061628,0.000821693,0.24445358,2434,7,T7,2.017076677,P025 +CTGCGGATCTCTTATG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1783,0.0382134,0.068486355,0.003722085,0.07667494,4030,4,T4,0.0,P025 +ACATGGTCACGGTTTA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1006,0.042276423,0.022764228,0.000813008,0.24471545,2460,1,T1,0.0,P025 +CAGTCCTCACGAAGCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1126,0.014931397,0.02582728,0.00322841,0.20500404,2478,0,T0,0.0,P025 +GGTGAAGCAGCTCGCA.01_WYP025_T_5,3.090968332,1,T,breast,NR,Pre_treatment,Chemo,1,879,0.0774983,0.017675051,0.008837526,0.05778382,1471,4,T4,3.090968332,P025 +ACGAGGAGTCGAACAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,995,0.026083468,0.025682183,0.001605136,0.25642055,2492,0,T0,0.0,P025 +CTAGTGATCTTTCCTC.01_WYP025_T_5,2.074814134,1,T,breast,NR,Pre_treatment,Chemo,1,703,0.0648318,0.02324159,0.005504587,0.33394495,1635,1,T1,2.074814134,P025 +GGACGTCTCGTCCAGG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1765,0.061542746,0.059593428,0.007240323,0.048732944,3591,4,T4,0.0,P025 +GGGTCTGGTACGCTGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1117,0.062298603,0.0349087,0.016111707,0.06283566,1862,4,T4,0.0,P025 +CAGCATAAGGCAGGTT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,933,0.01520387,0.01658604,0.03593642,0.122322045,1447,4,T4,0.0,P025 +CATCCACTCAGCTCGG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2265,0.025829436,0.03651748,0.005789356,0.055444222,4491,4,T4,0.0,P025 +TCGTAGATCTCCGGTT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,775,0.059236165,0.0436477,0.007794232,0.05533905,1283,4,T4,0.0,P025 +CATCGGGGTGAGTGAC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,856,0.03635527,0.025770824,0.000460193,0.35342845,2173,1,T1,0.0,P025 +TAGAGCTAGCGATAGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1485,0.034954406,0.04331307,0.00493921,0.041033436,2632,4,T4,0.0,P025 +GATCAGTAGAGCCCAA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1479,0.05631579,0.026578948,0.00131579,0.22868422,3800,0,T0,0.0,P025 +TTTGTCATCATTATCC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1059,0.023728814,0.011864407,0.001271186,0.20720339,2360,0,T0,0.0,P025 +ATTCTACTCTCTTATG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1780,0.040972535,0.04885187,0.002026114,0.21476813,4442,5,T5,0.0,P025 +GACGGCTTCATGGTCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1119,0.034395367,0.018102825,0.013034034,0.2686459,2762,1,T1,0.0,P025 +GCATGTAAGCCGCCTA.02_WYP025_T_5,1.037254283,2,T,breast,NR,Post_treatment,Chemo,1,1363,0.021293376,0.026288118,0.000788644,0.25788644,3804,1,T1,1.037254283,P025 +CGTAGCGCAAAGAATC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1788,0.033260033,0.06157229,0.034359537,0.058273777,3638,4,T4,0.0,P025 +AGGCCACGTCTGATCA.01_WYP025_T_5,0.687787916,1,T,breast,NR,Pre_treatment,Chemo,1,2247,0.019681742,0.063860975,0.002721943,0.057788946,4776,4,T4,0.687787916,P025 +TTTATGCTCATTATCC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1943,0.016737245,0.020568663,0.000201654,0.18350475,4959,5,T5,0.0,P025 +CACACAAGTACAGTTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1432,0.019447288,0.027891506,0.001535312,0.27789152,3908,0,T0,0.0,P025 +CTCGGAGTCTGCCCTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,422,0.01724138,0.020376176,0.11128527,0.2413793,638,4,T4,0.0,P025 +TACTTACTCCAAGTAC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1219,0.04481354,0.00908806,0.004700721,0.32403636,3191,5,T5,0.0,P025 +TGGCTGGCATCCGTGG.02_WYP025_T_5,2.228250467,2,T,breast,NR,Post_treatment,Chemo,1,1938,0.021575253,0.030153366,0.0,0.11437484,3847,7,T7,2.228250467,P025 +TTCGAAGAGCGCTTAT.02_WYP025_T_5,1.321639423,2,T,breast,NR,Post_treatment,Chemo,1,1068,0.030781694,0.005670312,0.000810045,0.29890645,2469,1,T1,1.321639423,P025 +TGCCAAAAGAGTACAT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1378,0.047876257,0.005646943,0.006874539,0.3339062,4073,1,T1,0.0,P025 +AGCTTGACATCTCCCA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,591,0.04753029,0.035414726,0.007455732,0.18359739,1073,11,T11,0.0,P025 +GGAAAGCGTAAGAGGA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1103,0.022118744,0.008537059,0.001164144,0.2991851,2577,11,T11,0.0,P025 +CTGATCCCAATCCGAT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2149,0.015933845,0.08168616,0.00383219,0.110730134,4958,4,T4,0.0,P025 +CGTAGCGCAAACCTAC.02_WYP025_T_5,1.225608398,2,T,breast,NR,Post_treatment,Chemo,1,1173,0.059604906,0.030313352,0.001021798,0.26226157,2936,2,T2,1.225608398,P025 +GTATCTTCAATGACCT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1538,0.029303184,0.028380249,0.001153669,0.28957084,4334,6,T6,0.0,P025 +CTAGCCTTCAGCGATT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1884,0.04250822,0.06552372,0.00234852,0.0925317,4258,6,T6,0.0,P025 +GGCGTGTAGCAATCTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,769,0.043253712,0.024531957,0.001291156,0.25112975,1549,11,T11,0.0,P025 +ACGCAGCTCGCGTAGC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1003,0.030163385,0.003770423,0.005027231,0.35232508,2387,1,T1,0.0,P025 +GGGAGATGTGACTCAT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1312,0.038175046,0.032588456,0.012104283,0.05586592,2148,4,T4,0.0,P025 +ATGAGGGCAGGCTGAA.02_WYP025_T_5,0.334374995,2,T,breast,NR,Post_treatment,Chemo,1,3822,0.05279299,0.012778387,0.000730194,0.14786418,13695,15,T15,0.334374995,P025 +GGAGCAATCTTTACAC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,2029,0.01759015,0.004837291,0.001759015,0.30167106,6822,0,T0,0.0,P025 +TGAAAGAAGCTAGTCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,726,0.02665706,0.004322767,0.002161383,0.33069164,1388,1,T1,0.0,P025 +CATCGAAGTAAGAGAG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1890,0.037063435,0.063435495,0.003563792,0.08101687,4209,4,T4,0.0,P025 +TCACAAGCAAATTGCC.01_WYP025_T_5,0.705569703,1,T,breast,NR,Pre_treatment,Chemo,1,2142,0.021501172,0.05179828,0.002736513,0.059225958,5116,4,T4,0.705569703,P025 +GCACATATCACCCGAG.01_WYP025_T_5,1.482620488,1,T,breast,NR,Pre_treatment,Chemo,1,1082,0.034750614,0.04946852,0.008994277,0.22649223,2446,1,T1,1.482620488,P025 +AGATTGCGTCAATGTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1542,0.017504489,0.0244614,0.00067325,0.2933124,4456,7,T7,0.0,P025 +GCGCGATTCAACGGCC.02_WYP025_T_5,3.307152169,2,T,breast,NR,Post_treatment,Chemo,1,1529,0.032298762,0.036083777,0.001009336,0.19530658,3963,3,T3,3.307152169,P025 +CGTCCATGTTCCATGA.01_WYP025_T_5,0.852125822,1,T,breast,NR,Pre_treatment,Chemo,1,1771,0.04111338,0.008682329,0.003319714,0.20020428,3916,4,T4,0.852125822,P025 +GCTGCGAGTGAGTATA.02_WYP025_T_5,1.001845075,2,T,breast,NR,Post_treatment,Chemo,1,3042,0.032184683,0.010110372,0.000505519,0.21577218,11869,3,T3,1.001845075,P025 +CCTACCACATGAGCGA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1799,0.014054384,0.022303697,0.004582951,0.09318668,3273,4,T4,0.0,P025 +TCAATCTGTACCCAAT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1705,0.020545518,0.007438895,0.006376196,0.114417285,2823,4,T4,0.0,P025 +GTCTTCGTCTCTTATG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1859,0.015741508,0.039491855,0.005523336,0.054404862,3621,4,T4,0.0,P025 +GAATGAAGTCCTGCTT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,915,0.033533964,0.011607911,0.004299226,0.32803094,2326,0,T0,0.0,P025 +CGGACACAGTGTTGAA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1461,0.03897041,0.014433485,0.001443349,0.2549916,4157,0,T0,0.0,P025 +AGTCTTTGTACAGTTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2370,0.021334298,0.061110105,0.003796782,0.052612547,5531,4,T4,0.0,P025 +CCTACCATCTGTTGAG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,434,0.003911343,0.027379401,0.036505867,0.38591915,767,4,T4,0.0,P025 +TACTCGCAGGCTAGCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1560,0.028052805,0.025459688,0.002593116,0.26308346,4242,0,T0,0.0,P025 +GGTGAAGCAACAACCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1580,0.038393978,0.011543287,0.001505646,0.23613551,3985,3,T3,0.0,P025 +GCAGTTAGTTTGGGCC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1943,0.00132246,0.04804937,0.00264492,0.1084417,4537,4,T4,0.0,P025 +ACTATCTAGACCTAGG.01_WYP025_T_5,0.996810265,1,T,breast,NR,Pre_treatment,Chemo,1,2671,0.047306176,0.0282523,0.002135348,0.0630749,6088,4,T4,0.996810265,P025 +TTTGGTTCAGGAACGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1213,0.005777778,0.078666665,0.005333333,0.044444446,2250,4,T4,0.0,P025 +AGAGTGGAGGCTCTTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,680,0.050045498,0.06824386,0.009099181,0.07643312,1099,5,T5,0.0,P025 +CCGTGGAAGAATGTGT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,790,0.028985508,0.011042098,0.002760524,0.22360249,1449,2,T2,0.0,P025 +GACGTTACAGGTCGTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2498,0.020243675,0.028303655,0.004686036,0.12783505,5335,4,T4,0.0,P025 +CTAGTGAGTCATGCCG.02_WYP025_T_5,2.285048783,2,T,breast,NR,Post_treatment,Chemo,1,1030,0.04803695,0.026789838,0.000923788,0.21016166,2165,3,T3,2.285048783,P025 +TGTGTTTCAATAGAGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,785,0.07665505,0.018292682,0.008710802,0.08885018,1148,4,T4,0.0,P025 +TTTGGTTCACATGACT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,739,0.035757575,0.017575758,0.001212121,0.27939394,1650,2,T2,0.0,P025 +CCGTGGACAGGAATCG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1082,0.081953645,0.002483444,0.001241722,0.29056293,2416,0,T0,0.0,P025 +AGTGTCATCAGGATCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,2573,0.017169429,0.005842375,0.000119232,0.18087517,8387,5,T5,0.0,P025 +ACGCAGCGTTCGCGAC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1348,0.043339416,0.037864964,0.009124087,0.06569343,2192,4,T4,0.0,P025 +AGTGAGGCAGACAAAT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,858,0.027920227,0.010256411,0.003418803,0.3019943,1755,1,T1,0.0,P025 +CAAGGCCTCCTTTACA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1788,0.058982037,0.03772455,0.00508982,0.041616768,3340,4,T4,0.0,P025 +CCATTCGCATCACCCT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1171,0.04075896,0.014406184,0.001054111,0.25579762,2846,0,T0,0.0,P025 +GAGTCCGAGAGCTGGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,938,0.052594174,0.019900497,0.008528785,0.07818053,1407,4,T4,0.0,P025 +GGTATTGAGGATATAC.02_WYP025_T_5,1.82578316,2,T,breast,NR,Post_treatment,Chemo,1,1615,0.038637664,0.04550658,0.002289639,0.110188894,3494,7,T7,1.82578316,P025 +CTAAGACTCTGATACG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1259,0.020351846,0.016557433,0.00103484,0.19454984,2899,0,T0,0.0,P025 +TAAGTGCCAAATACAG.01_WYP025_T_5,1.106105085,1,T,breast,NR,Pre_treatment,Chemo,1,2287,0.030645566,0.023109771,0.002763125,0.053504143,3981,4,T4,1.106105085,P025 +ACCGTAATCTCAAACG.02_WYP025_T_5,0.977512991,2,T,breast,NR,Post_treatment,Chemo,1,1545,0.024527187,0.030437352,0.001182033,0.14125295,3384,5,T5,0.977512991,P025 +ATCCACCTCAGGCAAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1339,0.047830544,0.03689785,0.001366587,0.15852408,2927,11,T11,0.0,P025 +CACCTTGGTAACGTTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1808,0.02481438,0.03008988,0.048456427,0.24013287,5118,6,T6,0.0,P025 +CCACCTATCTGAAAGA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1887,0.012154125,0.039565556,0.003361779,0.10783553,3867,4,T4,0.0,P025 +TTCGAAGAGTACGATA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1397,0.023295071,0.027008777,0.002025658,0.17319378,2962,5,T5,0.0,P025 +GTCTCGTAGTAGTGCG.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1541,0.058595765,0.01806918,0.1750129,0.04155911,3874,4,T4,0.0,P025 +CTGAAGTCAATCTGCA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1127,0.036248755,0.009976721,0.001995344,0.3032923,3007,0,T0,0.0,P025 +AGAGCGACAGACAGGT.02_WYP025_T_5,2.459964658,2,T,breast,NR,Post_treatment,Chemo,1,1609,0.036320753,0.026886793,0.001179245,0.2740566,4240,7,T7,2.459964658,P025 +GGGTCTGGTTATGCGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,970,0.08084023,0.024188414,0.007001909,0.08147676,1571,4,T4,0.0,P025 +GCAGCCATCTTCCTTC.01_WYP025_T_5,1.406407657,1,T,breast,NR,Pre_treatment,Chemo,1,1121,0.0566352,0.033314824,0.0094392,0.0755136,1801,4,T4,1.406407657,P025 +ACGCCAGAGATGCGAC.01_WYP025_T_5,0.849101883,1,T,breast,NR,Pre_treatment,Chemo,1,1894,0.039580353,0.08392942,0.005960897,0.042918455,4194,4,T4,0.849101883,P025 +AACCATGTCGTGGTCG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1035,0.022133416,0.006455579,0.001229634,0.44850907,3253,1,T1,0.0,P025 +GAAGCAGCAGTGACAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1055,0.04681504,0.008058327,0.002302379,0.31197238,2606,1,T1,0.0,P025 +GCAATCAAGTGACATA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,434,0.04304636,0.01986755,0.034768213,0.19205298,604,4,T4,0.0,P025 +ACTGAGTGTGACGGTA.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1070,0.07545107,0.010934937,0.007654456,0.061782394,1829,4,T4,0.0,P025 +GACACGCAGATCCCGC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1624,0.03041825,0.016327443,0.002907627,0.31133974,4471,0,T0,0.0,P025 +AGCCTAAAGCACAGGT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1008,0.007722008,0.067567565,0.009009009,0.09009009,1554,4,T4,0.0,P025 +GACAGAGGTAGCGCTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1189,0.028779253,0.030044276,0.000632511,0.20018975,3162,0,T0,0.0,P025 +CTCAGAATCCGCTGTT.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,756,0.047642928,0.005015045,0.003009027,0.40471414,1994,5,T5,0.0,P025 +CTTACCGTCGTGGGAA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,677,0.05202822,0.009700176,0.004409171,0.17372134,1134,4,T4,0.0,P025 +GTATTCTGTCGGATCC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1269,0.0602537,0.016384779,0.001849894,0.32293868,3784,2,T2,0.0,P025 +AGGGATGGTGCTCTTC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,2099,0.014393754,0.011466212,0.003415467,0.16589412,4099,4,T4,0.0,P025 +GTTAAGCTCGGGAGTA.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1458,0.033832643,0.040030994,0.000258264,0.20506199,3872,6,T6,0.0,P025 +CATCAAGAGCAGCCTC.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1670,0.03581546,0.02043707,0.008498584,0.23431809,4942,6,T6,0.0,P025 +AGAGTGGGTTGTGGCC.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1215,0.05421995,0.022506393,0.006138107,0.08695652,1955,4,T4,0.0,P025 +CTTCTCTTCACGACTA.02_WYP025_T_5,2.810121798,2,T,breast,NR,Post_treatment,Chemo,1,1807,0.02459815,0.06015587,0.000974184,0.16074038,4106,7,T7,2.810121798,P025 +TTGCCGTCAACGATCT.01_WYP025_T_5,0.0,1,T,breast,NR,Pre_treatment,Chemo,1,1202,0.010382514,0.02021858,0.006557377,0.06393442,1830,4,T4,0.0,P025 +GCCTCTAAGATGCCAG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,1593,0.030513918,0.017398287,0.001070664,0.25107068,3736,5,T5,0.0,P025 +CCTATTAGTTGATTCG.02_WYP025_T_5,0.0,2,T,breast,NR,Post_treatment,Chemo,1,968,0.053564236,0.012082159,0.001208216,0.33064842,2483,2,T2,0.0,P025 diff --git a/flask_backend/models/BreastCancer_SVM_v1/utils.py b/flask_backend/models/BreastCancer_SVM_v1/utils.py new file mode 100644 index 00000000..634d9fee --- /dev/null +++ b/flask_backend/models/BreastCancer_SVM_v1/utils.py @@ -0,0 +1,69 @@ +import os +import sys +import numpy as np +import pandas as pd +from typing import List + +def int_conventor(df: pd.DataFrame, col_names: list [str]) -> pd.DataFrame: + ''' + A function to convert the column names from another data type to integer + :param df: data frame + :param col_names: Column names to be converted in to integer + :return: pd.dataFrame + ''' + try: + for col in col_names: + df[col] = df[col].astype(int) + return df + + except Exception as e: + raise e + +def float_conventor(df: pd.DataFrame, col_names: list[str]) -> pd.DataFrame: + ''' + A function to convert the column names from another data type to integer + :param df: data frame + :param col_names: Column names to be converted in to integer + :return: pd.dataFrame + ''' + try: + for col in col_names: + df[col] = df[col].astype(float) + return df + + except Exception as e: + raise e + +def remove_cols(df: pd.DataFrame, col_names: list[str]) -> pd.DataFrame: + ''' + A function to remove columns from a data type + :param df: + :param col_names: + :return: pd.DataFrame + ''' + + try: + df = df.drop(col_names, axis=1, errors='ignore') + return df + except Exception as e: + raise e + + +def remove_iqr_outliers(df, cols): + """ + Removes outliers using IQR method for the given numeric columns. + Keeps rows where each feature is within [Q1 - 1.5*IQR, Q3 + 1.5*IQR]. + """ + df_clean = df.copy() + + for col in cols: + Q1 = df_clean[col].quantile(0.25) + Q3 = df_clean[col].quantile(0.75) + IQR = Q3 - Q1 + + lower_bound = Q1 - 1.5 * IQR + upper_bound = Q3 + 1.5 * IQR + + df_clean = df_clean[(df_clean[col] >= lower_bound) & (df_clean[col] <= upper_bound)] + + return df_clean