From 5f5b109505a71097561214c587d05bf70d2c5552 Mon Sep 17 00:00:00 2001
From: Jayaram Kancherla <jayaram.kancherla@gmail.com>
Date: Sat, 3 Jan 2026 08:17:30 -0800
Subject: [PATCH 1/2] rename files

---
 setup.cfg                                | 2 +-
 src/biocframe/{frame.py => BiocFrame.py} | 0
 src/biocframe/__init__.py                | 2 +-
 src/biocframe/io/from_pandas.py          | 2 +-
 tests/test_methods.py                    | 2 +-
 tests/test_pandas.py                     | 2 +-
 tests/test_readme.py                     | 2 +-
 7 files changed, 6 insertions(+), 6 deletions(-)
 rename src/biocframe/{frame.py => BiocFrame.py} (100%)

diff --git a/setup.cfg b/setup.cfg
index db247c7..600c3e7 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -49,7 +49,7 @@ python_requires = >=3.9
 # For more information, check out https://semver.org/.
 install_requires =
     importlib-metadata; python_version<"3.8"
-    biocutils>=0.3.1
+    biocutils>=0.3.3
     numpy
 
 [options.packages.find]
diff --git a/src/biocframe/frame.py b/src/biocframe/BiocFrame.py
similarity index 100%
rename from src/biocframe/frame.py
rename to src/biocframe/BiocFrame.py
diff --git a/src/biocframe/__init__.py b/src/biocframe/__init__.py
index ac15730..6086c6a 100644
--- a/src/biocframe/__init__.py
+++ b/src/biocframe/__init__.py
@@ -15,5 +15,5 @@
 finally:
     del version, PackageNotFoundError
 
-from .frame import BiocFrame, relaxed_combine_rows, merge, relaxed_combine_columns
+from .BiocFrame import BiocFrame, relaxed_combine_rows, merge, relaxed_combine_columns
 from .io import from_pandas
diff --git a/src/biocframe/io/from_pandas.py b/src/biocframe/io/from_pandas.py
index 71f2d62..c28b031 100644
--- a/src/biocframe/io/from_pandas.py
+++ b/src/biocframe/io/from_pandas.py
@@ -5,7 +5,7 @@
 if TYPE_CHECKING:
     import pandas
 
-from ..frame import BiocFrame
+from ..BiocFrame import BiocFrame
 
 __author__ = "jkanche"
 __copyright__ = "jkanche"
diff --git a/tests/test_methods.py b/tests/test_methods.py
index 93bbeea..bbddd96 100644
--- a/tests/test_methods.py
+++ b/tests/test_methods.py
@@ -1,7 +1,7 @@
 import numpy as np
 import pytest
 import pandas as pd
-from biocframe.frame import BiocFrame
+from biocframe.BiocFrame import BiocFrame
 from biocutils import Factor, Names
 import biocutils as ut
 
diff --git a/tests/test_pandas.py b/tests/test_pandas.py
index c49750d..32cf8f8 100644
--- a/tests/test_pandas.py
+++ b/tests/test_pandas.py
@@ -1,7 +1,7 @@
 import numpy as np
 import pytest
 import pandas as pd
-from biocframe.frame import BiocFrame
+from biocframe.BiocFrame import BiocFrame
 from biocutils import Factor
 
 __author__ = "jkanche"
diff --git a/tests/test_readme.py b/tests/test_readme.py
index a8356d0..067db10 100644
--- a/tests/test_readme.py
+++ b/tests/test_readme.py
@@ -1,6 +1,6 @@
 from random import random
 
-from biocframe.frame import BiocFrame
+from biocframe.BiocFrame import BiocFrame
 
 __author__ = "jkanche"
 __copyright__ = "jkanche"

From 60404edb3449a576abfc87af7c44006bc242228c Mon Sep 17 00:00:00 2001
From: Jayaram Kancherla <jayaram.kancherla@gmail.com>
Date: Sat, 3 Jan 2026 08:20:28 -0800
Subject: [PATCH 2/2] remove deprcation warning

---
 CHANGELOG.md               | 2 +-
 src/biocframe/BiocFrame.py | 4 ----
 2 files changed, 1 insertion(+), 5 deletions(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 0985caa..5cf135e 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,6 +1,6 @@
 # Changelog
 
-## Version 0.7.0 - 0.7.1
+## Version 0.7.0 - 0.7.2
 
 - Major update to type hints throughout the module for better type safety and consistency.
 - Fixed bug in slice operations where column indices might be incorrectly initialized.
diff --git a/src/biocframe/BiocFrame.py b/src/biocframe/BiocFrame.py
index 8b83d91..6770a0c 100644
--- a/src/biocframe/BiocFrame.py
+++ b/src/biocframe/BiocFrame.py
@@ -713,10 +713,6 @@ def get_column(self, column: Union[str, int]) -> Any:
 
     def column(self, column: Union[str, int]) -> Any:
         """Alias for :py:meth:`~get_column`, provided for back-compatibility only."""
-        warn(
-            "Method 'column' is deprecated, use 'get_column' instead",
-            DeprecationWarning,
-        )
         return self.get_column(column)
 
     def has_row(self, name: str) -> bool: