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No such file or directory: 'ResultsStrand/CRISPRstrand_Summary.tsv' #24

@EC-MQ

Description

@EC-MQ

Hello,

I am trying to run CRISPRidentify on one of the test fasta files with the following command

python CRISPRidentify.py --file NC_017040.1.fasta

but I get the following error.
Can you please help me?

thanks

NC_017040

			Executing file 1 out of 1 (NC_017040.fa)
  1. Run initial array detection
  2. Refine detected arrays
  3. Evaluate candidates
  4. Enhance evaluated arrays
  5. Complement arrays with additional info
    Traceback (most recent call last):
    File "CRISPRidentify.py", line 306, in
    main()
    File "CRISPRidentify.py", line 290, in main
    run_over_folder_of_files(folder_multifasta, folder_result, pickle_folder, json_folder)
    File "CRISPRidentify.py", line 251, in run_over_folder_of_files
    absolute_directory_path=script_absolute_path)
    File "/g/data/kq94/projects/xantho/components/pipeline.py", line 34, in init
    self._run_non_crispr_computation()
    File "/g/data/kq94/projects/xantho/components/pipeline.py", line 79, in _run_non_crispr_computation
    absolute_directory_path=self.absolute_directory_path)
    File "/g/data/kq94/projects/xantho/components/module_non_array_computations.py", line 37, in init
    self._calculate_all_non_array_values()
    File "/g/data/kq94/projects/xantho/components/module_non_array_computations.py", line 49, in _calculate_all_non_array_values
    self._calculate_strand()
    File "/g/data/kq94/projects/xantho/components/module_non_array_computations.py", line 178, in _calculate_strand
    absolute_directory_path=self.absolute_directory_path)
    File "/g/data/kq94/projects/xantho/components/components_non_array_computations.py", line 115, in init
    self._compute_all_strands()
    File "/g/data/kq94/projects/xantho/components/components_non_array_computations.py", line 141, in _compute_all_strands
    with open("ResultsStrand/CRISPRstrand_Summary.tsv", "r") as f:
    FileNotFoundError: [Errno 2] No such file or directory: 'ResultsStrand/CRISPRstrand_Summary.tsv'

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